Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | LRFLGRLLHDANLWHLNRHSVARAMAVGLFAAFMPIPLQMLLAAALAILVRGNMPIAVSLVWLTNPITMPPVFYCTYKVGSWLLGQPPRQLPDSYSWDWVMSQMSTLWQPFLLGSVVTGVVLGALAYFLTMLYWRWWVSRQWR |
1 | 4huqS | 0.13 | 0.12 | 0.91 | 1.01 | SPARKS-K | | -------------DTLSMVTMGVLMALQLVISRIKVSFTFLIVALIAKWFWWGMLTAAVVDVIGTLMTFIGFTVSAVLGSLIYAVFLYRQPVSWWRVIGASVLIATLLNTLWVTLLPVRALKTPVQIVLVYLLLKSQVIQMIQ |
2 | 5xjcA | 0.03 | 0.03 | 0.85 | 0.83 | DEthreader | | PEHVRKIIDHFHDKRVYLGALKYM-PHAVLKLLEMPPPWVEVGLQVCR---QGYNMLNLYNFRERLQLTGMYLMRQIRMCKD-LKHL-Y---------P--GC-GF-WAAGWRVWLFFMRGITPLLERWLGNLLARQFEGR-- |
3 | 4a01A | 0.11 | 0.11 | 0.99 | 0.41 | CEthreader | | LPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIPIFAIAISIFVSFTFAAMYGIAVAALGMLST-IATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRASITTV |
4 | 6t1zA | 0.09 | 0.09 | 1.00 | 0.83 | EigenThreader | | IVFLGAFSYGTVFSSSAVATFVAGILAGFFADRNGRKPVMVFGTIIQFLLISFGYNFVITAGNAMIIDARLTKQKGFIWGSLFMAIGMIFSFLTTTFTPIFIAGIVYTLGEIVYTPSVQTLGGSYNGVAAIKMPIASILAGLL |
5 | 3zuxA | 0.19 | 0.16 | 0.84 | 0.27 | HHpred | | -SDFDILFK-------HPKVVIIGIAVGVIVGCCPGGTAS---NVMTYLARGNVALSVAVTSVSTPLLTPAIFLM--LAG-----EML-EIQAGMSKEKALPLVSVAAIVLIIGAVVGESLHNGIGYLLGFFAAKWTGL---- |
6 | 3vvnA2 | 0.12 | 0.11 | 0.94 | 0.27 | MRFsearch | | --VTGAAYGERNVEK-LETAYLYAIKIAFMIELAVVAFIMLFAPQVAYLFTAQVIKGDLISALRTLPVFLVLTPFGMMTSAMFQGIG------EGEKSLILTIFRTLVMQVGFAYIFIGIVIGNMVAAIVGFLWGRMRISALK |
7 | 4ui9O1 | 0.10 | 0.08 | 0.81 | 0.73 | FFAS-3D | | --------------WVTPYKIAVLVLLSEMSRVSLVERRRLNQQLLPLLQGPDITVSKLLKLIEESC-PQLANSVQIRIKLMAEG----------ELKDMEQFFDDLSDSFVVGLFLRHMILAYSLYTALQQYFQSDENKK-- |
8 | 5kbwA | 0.10 | 0.09 | 0.90 | 0.97 | SPARKS-K | | ------------SSIKKISFVGIFSALATLVMFLEFPIEIPALIVSFLLPGVGMFVVLVKDILFFLMNAVLGMSFVGIAGLIYHRNKSRATAIKGMLGLNALIVPLYFLKFFPFILAFNLVKFGIDSVVTFFVYKKVSSIL-- |
9 | 6cseM | 0.08 | 0.08 | 0.99 | 0.96 | CNFpred | | IIPAFGTIFSSAF-ALIGTAIMWGVKRGVFSNEAGLGSAPIAAAAAKTDHPGRQALVSMTGTFLDTIVVCTITGLVLTIAGLKAFPGLTDLTGASLTAASFDALMPMGGLIVTIGLVFFAYSTVLGWSYYGEKCFEYLIGTKG |
10 | 6vq6a | 0.10 | 0.08 | 0.84 | 0.83 | DEthreader | | ---------TNKFTHFQNIVVFPFFA--F-DFGH-G-ILMTLFAVWMVFRYIILLMGLFSIYTGLYNDCFSASEVLWTM-V-----IHIGLH--RS-LAGGLGLFFIFAAFATLTVAILIMEGLSAFLHALRLHWVFQNKFYT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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