Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | SLQEQLLKAGLVDQKKAKQLKQEKRKQAKQTPKGHQVEDETKLRAQQAREEKAQRDREMNRLRQEEADRKALKAQVKQLIEMNRINRNKGEVGYQFADEGKVKKIYVTQELQDGLASGRFAIARMGDAYEVISRKVAEKIRERAPEFVVVLNDNKNAEPDEDDPYAAYQIPDDLMW |
1 | 5nenA | 0.08 | 0.03 | 0.37 | 0.70 | DisCoVER | | -------TVQAP--------------------------------------------------------------AS--GI--IKN------IAVRDGDKAGEVLVQLSQNTAITSPVDGTVVGLNI--FTQGG--V--VG--AGDHLMDVVP------------------------ |
2 | 6j72A | 0.11 | 0.09 | 0.74 | 0.83 | DEthreader | | --IRLPDAAICPVVLRQNDRIRDQIVDEIRSAEHLLELSSRRLTAELERRKQEAQDALALWQQVLSDGIADLTADVDHDLRHRFIATEPWAE-------------IGA-ELE-DA---VAT---------AVGD-NFVWAYQRAEMFGML-------------AKAVRKFDVVV-- |
3 | 3cj9A | 0.09 | 0.09 | 1.00 | 0.46 | CEthreader | | DVQGGGISSYANDPSKAGQSLVRCLEQALRDVPRDRHASLLNLTSPEATARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFETTSPSEDPGNEVHLRLYGQHYRVYTHSFLCYGRDQILLRLLASALQIHRFH |
4 | 3qx3A | 0.10 | 0.09 | 0.89 | 0.63 | EigenThreader | | INNIIKIVGLQYKKHIKGLLINFIHHNWPSLLKHGFAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHFSNSDNERSIPSLVDGFLLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGW--ACKLP-----------------NYDAREIVNNVRRMLDGLDPHPMLP |
5 | 3s6gA | 0.17 | 0.09 | 0.55 | 0.30 | HHpred | | -------------------------------------------------------------------TLTQANLALVDAIRDAGGRAARGVDKLG--RVGEPRHIH-LDLVGSAARAGQAAILACDGTLVNINADVVRALHALQPYKVVFLTGTGG-LLDEDG----DILS----- |
6 | 5nenA1 | 0.10 | 0.05 | 0.46 | 0.53 | MRFsearch | | --MKQLAADGYLPRNRYLEVQRQFAEVNSSID--ETVGRIGQLQKQLLESQQRIDQRFADYQREVRTQLAQTQMDASEFRNKLQM------------------------------------------------------------------------------------------- |
7 | 6mi3A | 0.17 | 0.08 | 0.45 | 0.67 | FFAS-3D | | ELRDAIRQSNQILRERAEELLHFQASQREEKEFLMSKFQEARKLVERLGLEKLELEDKNEELLSEIAHLKNEVARLKKLV------------------------------------------------------------------------------------------------ |
8 | 6ybtu | 0.11 | 0.09 | 0.76 | 0.79 | SPARKS-K | | ----------------QTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERLRQEAKEREKERILQEHEQIKKKTVRERLEQIKKTE------LGAKAF----KDIDIEDLEELDPDFIMAKQVEQLEKEKKELQERLKNQEKKIDYFERAKRLEE---------------- |
9 | 3ll9A | 0.15 | 0.07 | 0.49 | 0.59 | CNFpred | | -----------------------------------------------------------------QNWVKKLNSHVCDALLAEGIPAVSMQPAFIRAHAGRISHADIS-LIRSYLEEGMVPVVYGDVFSVISGDQLINHFSLRMPERVILGTD----------------------- |
10 | 6z2wE | 0.06 | 0.05 | 0.84 | 0.83 | DEthreader | | ILEPFLLVMKDFEIQRLIDFLISRIWFMRR------ITRTSESLLSLLRLLSTRILIAWTQTVFDTLLPILPVRFRYPNRQIKTLSLFLITN----------EQAFQKK-LQDNIL--GIFQ---------VFSSDIHDTTYYEKLRIGIQIQLAIQESKYENHPLHYILDIIITM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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