>PF09826 (547 residues) FSTTNTQVQGVDEADIVKSDGTYLYQSTQNEVRIIKAYPATEMKIASRISYDNGKFVPQE MYVDDRRLIVIGQADETISYPPDPASKRGIPRYQGMQSVKTMIYDITDKKQPRLIRQLEL EGQYMSSRKIGASLYVTANHYMDAYRILQEKAEVPGPTYKDSVHHNQYQTIPYSEIRYFP DHFRPEYLIVAGVNLDDTKQEMSLNTYLGAGENIYASTKNLYVAVTQNNVQPVAVKQKGA TTPLIAPPMESDTTIYRFAMNKGDIRYTGKGSVPGRILNQFSMDENDGYFRIATTSGNMW RDDEHTSKNNLYVLDNKLEVFGKLEGIAPGERIYSVRFMGDRAYMVTFKKVDPLFVLDLK KPSAPSVLGALKIPGYSDYLHPYDENHIIGFGKEAEADKDWAYYQGMKIALFDVSDVTKP KEKFKTVIGDRGTDSELLRNHKALLFSKEKNLLAFPVTVHERTSEQKAKNDMREYGHFTF QGAYVYQLDLQKGFQLTDQITHLAKEDIARAGEGWYDSSSNIKRILTIGDTLYTVSDDFV KTQQLST |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | FSTTNTQVQGVDEADIVKSDGTYLYQSTQNEVRIIKAYPATEMKIASRISYDNGKFVPQEMYVDDRRLIVIGQADETISYPPDPASKRGIPRYQGMQSVKTMIYDITDKKQPRLIRQLELEGQYMSSRKIGASLYVTANHYMDAYRILQEKAEVPGPTYKDSVHHNQYQTIPYSEIRYFPDHFRPEYLIVAGVNLDDTKQEMSLNTYLGAGENIYASTKNLYVAVTQNNVQPVAVKQKGATTPLIAPPMESDTTIYRFAMNKGDIRYTGKGSVPGRILNQFSMDENDGYFRIATTSGNMWRDDEHTSKNNLYVLDNKLEVFGKLEGIAPGERIYSVRFMGDRAYMVTFKKVDPLFVLDLKKPSAPSVLGALKIPGYSDYLHPYDENHIIGFGKEAEADKDWAYYQGMKIALFDVSDVTKPKEKFKTVIGDRGTDSELLRNHKALLFSKEKNLLAFPVTVHERTSEQKAKNDMREYGHFTFQGAYVYQLDLQKGFQLTDQITHLAKEDIARAGEGWYDSSSNIKRILTIGDTLYTVSDDFVKTQQLST | |||||||||||||||||||
1 | 5hrmA | 0.14 | 0.09 | 0.62 | 3.00 | HHpred | ---AGVRIWNRGGNLQLSWVDQCAYVSTPAGVAVIDVRDPRAPKPVRLLRDRGSIDAVETMHAIGRKVLVAGAYSGGIA------------GRGEEDAAWLSIYDASNCLNPKLQSEFKWPANIHMVTISGRRVYGTEVVPGLGS----------------------------------------GKGGLHVLDISDMKRPRYLGRFGRTPHEVSIDERRIYAAVLA----------------------------------------------SETGDVPVGASILASDGDVPVE------------NGSVYILDVDMRLVGEAKQG--GF-HSVASINGPHLVGAAGACPGTPRIINIADEKNPKIVGEFKLQMNASFSHFNDNTRLGLFPFFA---------GG--VRIVDLRDPTKPVEVGYYKPGANPDMVRYVPSGHIWFACVTTGFHVVELNPDLRARLGFP------------------------------------------------------------------------------- | |||||||||||||
2 | 5hrmA | 0.14 | 0.09 | 0.65 | 1.24 | FFAS-3D | -GPGDRPETGL-QGQTLSWVDQCAYVSTPAGVAVIDVRDPRAPKPVRLLRDRGSIETMHAIAAPGRKVLVAGAYSGGIAGRGE------------EDAAWLSIYDASNCLNPKLQSEFKWPANIHMVTISPNGRRVYGTEVVPGLGSGKG--------------------------------------GLHVLDISDMKRPRYLGRFGVTRHEVSISHDRIYAAVLASETGDVPVGASILASDGDVPVENGSVYILDNSDSQPKMRLVGEAKQGGF-HSVVPASINGVPHLVGAAELGACPG-------------------------------------------------TWPRIINIADEKNPKIVGEFKLQMNIKEVDDARNTRLGLFPFFAGG-----------VRIVDLRDPTKPVEVGYYKPGANPDTPLTDGCMSHVRYVPESGHIWFA---------------------CVTTGFHVVELN---------------------------------------------------------- | |||||||||||||
3 | 5hrmA | 0.10 | 0.07 | 0.73 | 1.33 | SPARKS-K | -------QVVIGPGDRPETGLQGQTTIEDVVSGRSKLPYHAGVRLVGRTDIWNR-GGNLQLSWVDQCAYVSTFKQAGPITA------NSRSALFLREPAGVAVIDVRDPRAPKPVRLLRDRGSIDHAIAAGRKVLVAGAYSG--------------------GIAGRGEEDA---------------AWLSIYDASNCLNPKLQSEFKWNIHMVTISPNRVYGTEVV------------------PGLGSGKGGLHVLDISDKRPRYLGRFGVTRAGFTPHEVSISHRRIYAAVLAILASDGDVPVENGSVYILDPKMRLVGEAKQ---GGFHSVVPASINHLVGAAECPGTWPRIINIADEKNPKIVGEFKLQMNIIPDITARLGAVGSHFNDVDDARNTFPFFAGGVRIVDLRDPTKPVEVGYYKPGANMSHVRYVPSGHIWFACVTTGFHVVELNPDLRARLGFPT------------------------------------------------------------------------------ | |||||||||||||
4 | 5i2tA | 0.08 | 0.06 | 0.79 | 2.74 | CNFpred | ---------------TFSDDGKQLLSPVGNRVSVFDLIN--NKSFTFEYEHR---KNIAAIDLNKQGTLLISIDE----------------------DGRAILVNFK---ARNVLHHFNFKEKCSAVKFSPRLFALASGRFLQIWKTPDVDRQFAPFVRHRVHA-QDITSLTWSFILTTSK-----DLSAKIWSVDSEEKNLAATTFNGHVMGAFFSHDQEKIYTVSKD-----------------------GAVFVWEFT--SWRITKKHFFYAAKVKCVTFHPA-TRLLAVGFTS-----------GEFRLYDLDFTLIQQLSMG--QNPVNTVSVNQTGEWLAFGSSLGQLLVYEWQ---SESYILKQQG-DSTNSLAYSPDGSRVVTASED-----------GKIKVWDIT---SGFCLATFEEHTSSVTAVQFAGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQ-FNCLAVDGEVVCAGSLDNFDIHVWSVQTGQLLDALSG------HEGPVSCLSFSQSVLASASWKTIRIWSIFG | |||||||||||||
5 | 5hrmA | 0.12 | 0.09 | 0.73 | 1.04 | MUSTER | YHAGRTDIWNRGGNLQLSWVDQCAYVSTPAGVAVIDVRDPRAPKPVRLLRDRGSIDAVETMHAIARKVLVAGAYSGGIAGRGEE------------DAAWLSIYDASNCLNPKLQSEFKWPANIHMVTISGRRVYGTEVVPG-------LGSGKGGLHVLDISDMKRPRYLG--RFGVTRPNGLTAGFTPHEVSISHD-------------------ERRIYAAVLASETGDVPVGASILASDGDVPVENG--SVYILDNSD-------------------------------------IVDGRSQP---------KMRLVGEAKQGGF---HSVVPASINHLVGAAGACPGTPRIINIADEKNPKIVGEFKLQMPIPDITARLGAVGSHFNDVDDARNTRFPFFAGGVRIVDLRDPTKPVEVGYYKPGANPDTPLSGN--------------------GLNWTGLNDQVTDGCMSHVRYVSGHIWFACVTTGFHVVELNPDLRARLGFPT------------------------------------ | |||||||||||||
6 | 6jp6A | 0.09 | 0.08 | 0.89 | 1.32 | SPARKS-K | FRKSLGGERSILYSGIIKVDKVYVNAGTVGGVIIWDLFSE---TKIHNLL--GHEGSIFYVNLSGRYVASCSDDR------------------------SIRLWDLETGK---QLSVGWHTARIWNLMFFDSKLISVSEDCTRVWNIIESREN--VAELSISNVYEVHLIKSIWGVDVKDDEMIAVTSGLKLIDLLQLKRHDEETSFSESIKGFQWFSFGVIAITSLGKILKYSDVTKQWKLLLTNEKFNSKSDILLIKFSKDSADIIETEEFHSKTNNCLVTEYDDDSFLLTLQS-----PNPREKFVCLEISLQNLKIKSKHCNKPENFSSSCLTSFRNH--ILVGSRFSTLVIYNLLDESEEPF--IIRRLSPGDTTTSIENSAVFSVTNR----------DG-YYVFIELTKNLSYKVLHSNKMMKGFLEGAFFNGEYITYGFKSSLFYLYNETNCYELASEVCGGSHRLWNLAKITDGHVLMYIKAS--RFHLRKIYNSIVPE---TLENGVHGREIRDISICPVIFCTASETTIKLGYFNN | |||||||||||||
7 | 4nsxA | 0.13 | 0.09 | 0.71 | 2.73 | CNFpred | --------------VALSAHFHYVYAAYENKVGIYKR-----GIEEHLLELET-DANVEHLCIFGDYLCASTDD------------------------NSIFIYKKSDKYPSEFYTKLTVTGEIVSLQHYLNKLTVVTKSNVLLFNVRTG-----KLVFTSNEFPDQITTAEPAIIALGT-----VTGEVIMFNMR---KGKRIRTIKI-ISSLSFRTSSHLSVGTSS------------------------GDLIFYDLDRRSRIHVLKNIHRYGGVTQATFLN-GQPIIVTSGGD---------NSLKEYVFDP-PRYLRSRGGH--SQPPSYIAFADQSHFMLSASKDRSLWSFSLRK---DAQSQEMSQFPEIVALAIENEWENIITAHKD----------EKFARTWDMR--NKRVGRWTFDTTDDG-------FVKSVAMSQCGNFGFIGSSN---------------------GSITIYNMQ---SGILRKKYKLHK---------------RAVTGISLDGRKMVSCGLGIVGFYDFNK | |||||||||||||
8 | 5i2tA | 0.07 | 0.06 | 0.92 | 1.26 | SPARKS-K | DFKFSNLLGTVYRQGNITFDGKQLLSPVGNRVSVFDLINNK------SFTFEYERKNIAAIDLNGTLLISIDE------------------------DGRAILVNFKARN---VLHHFNFKEKCSAVKFSGRLFALASGRFLQIWKTPDVNKDRQFAPFVRHRVHAGHFQ-DITSLTWSQDSRFILTTSAKIWSVDSEEKNLAATTFNDYVMGAFFSHDQEKIYTVSKDGAVFVWEFTSWRITKKHPATRTSGEFRLYDLPDFTLIQQLSVSVNQTGEWLAFGSSKLGQLLVYEWLKQQGHFDSTNSDGKIKVWDITGFCLATFEE--HTSSVTAVQFAKRGQVMFSSSLDGTVRAWDLIRYRNFR---TFTGRIQFNCLAVDPSGEVVCAGWSVQTGQLLGPVSCLSFSTIRIWSIFGSQQVEPIEVYSDVLALSMRPDGEVAVSTLKGQISIFNIEDAKQVGNIDCRIISKFFTTIHYSGMAIVAGGNNN----SICLYDVPNEVLLKRFIVS-RNEVRVTSVQFSANAFAAASTEGLLIYSTN- | |||||||||||||
9 | 3ei1A | 0.08 | 0.06 | 0.76 | 2.72 | CNFpred | ---------------VASCNSSQVVVAVGRALYYLQIHP-QELRQISHTEME---HEVACLDITPSPLCAIGLW----------------------TDISARILKLP---SFELLHKEML-PRSILMTTFESSHYLLCALGDG-----------ALFYFGLNI--ETGLLSDRKKVTLG-----TQPTVLRTFRSL----STTNVFACSDRPTVIYSSHKLVFSNVNLKEVNYMCPLNSDGYPDSLALA-NNSTLTIGTIDEIQKLHIRTVPLY-ESPRKICYQEVSQCFGVLSSRIEVQDT-EEVEVHNLLIIDQTFEVLHAHQFL-QNEYALSLVSCKTYFIVGTAMKQGRIVVFQYSD-GKLQTVAEKEVKGAVYSMVEFNGKLLASINS--------------TVRLYEWTTEKELRTECNHYNN-----------IMALYLKTKGDFILVGDL---------------------MRSVLLLAYKPEGNFEEIARDFN----------------NWMSAVEILDDDNFLGAENFNLFVCQKDS | |||||||||||||
10 | 6l8aA | 0.15 | 0.10 | 0.64 | 1.23 | SPARKS-K | AEASVTQTQFYGNALGPSVVDGVVYAESDMFAYAVNA---KTGKLIWRASPVGN-NLMGNPLVIGNTVYLSAGSVAFN-----FANVSASARGLNVSFNGIYALNR---SNGKLLWYFATPGETMATAYDNNTLFIADGAG-----------------------------------------------NAFGINATTGKQVWKTVGGMDNMSSVTAYRHNIYFAMAIKP------------------------YLYCLNESNGH--IVWKGTIPGASNTGVSPAAADGVVVLDATTK-----PQAMFSNVIRAFDKTGAVLWTRNMKIPAFKGGVPMIHNNIVYVGNP-VASTYQAYELKTGK---LLWTWHVPGAGRSAPTYYKGLLYITTGQ-------------YIFVVNP---ATGKELHQHHIGGQFGIESVIVGGTVYLTNSWDWIMAIPLKTISH------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |