>PF09807 (249 residues) FPELNNLLNTSPDRAEQGKLTLLCAAETDGSFLVHHFLSFYLKANCKVCFVALIQSFSHY NIVGQKLGVSLTAARERGQLVFLEGLKSSVDVFFQAQEKTHPLHFLREANAGNLQPLYEF VQEALKPVDSGAAAWRCPVLLVDDLSVLLSLGVGAVAVLDFVHYCRATVCSELKGNLVAL VHDNGDAEDQENDILLNGLSHQSHLVLRAEGLATGFCKDVHGQLRILWRASQPTAQRGRS LTFQYKIQD |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | FPELNNLLNTSPDRAEQGKLTLLCAAETDGSFLVHHFLSFYLKANCKVCFVALIQSFSHYNIVGQKLGVSLTAARERGQLVFLEGLKSSVDVFFQAQEKTHPLHFLREANAGNLQPLYEFVQEALKPVDSGAAAWRCPVLLVDDLSVLLSLGVGAVAVLDFVHYCRATVCSELKGNLVALVHDNGDAEDQENDILLNGLSHQSHLVLRAEGLATGFCKDVHGQLRILWRASQPTAQRGRSLTFQYKIQD | |||||||||||||||||||
1 | 2dr3D | 0.12 | 0.11 | 0.88 | 1.33 | DEthreader | IPGVDEILHGG---IPERNVVLLSGGPTGKTIFSQQFLWNGLKMGEPGIYVALEEHPVQVRQNMAQFGWDVKPYEEKGMFAMVDAFAGIGKS-KE-Y---E-KYIV-HDLT-DIREFIEVLRQAIRDI-------NAKRVVVDSVTTLYI-NKPA-MARSIILQLKRVLAG-TGCTSIFVSQVSVGER----GFGGPGVEHGVDGIIRLDLDEIDG--ELKRSLIVWKMRGT-S---HSMRRHPFDITD | |||||||||||||
2 | 2dr3D | 0.12 | 0.11 | 0.88 | 1.33 | DEthreader | IPGVDEILHGG---IPERNVVLLSGGPTGKTIFSQQFLWNGLKMGEPGIYVALEEHPVQVRQNMAQFGWDVKPYEEKGMFAMVDAFAGIGKS-KE--Y---EKYIVH-D-LTDIREFIEVLRQAI-RD------INAKRVVVDSVTTLYI-N-KPAMARSIILQLKRVLAG-TGCTSIFVSQVSVGER----GFGGPGVEHGVDGIIRLDLDEIDGE--LKRSLIVWKMRG--TS--HSMRRHPFDITD | |||||||||||||
3 | 4a8jC | 0.12 | 0.10 | 0.84 | 3.07 | HHpred | ---------LPAHDSNSHNLFFITHSCTQPLW-INALVETHVLTRSHAVLASFIHEQNYFTNSLNKLKIPSN------NYNVLDFLSDFIVNNIH---------------NKPRDKILSDVLAKFSAAI--QNNPTDTIVIIEQPELLLSLVLTCSELNNFITPLLRQC-----KVLIIVSNSDIFNHSSNLQNFYKSSFIKSI-NLNLNPLKT--AKDVTGSLHVCRGGAPANSLHVVENEYLYLNEK | |||||||||||||
4 | 2dr3D | 0.11 | 0.10 | 0.90 | 0.74 | DisCoVER | KTGIPGVDEILHGGIPERNVVLLSGGPTGKTIFSQQFLWNGLKMGEPGIYVALEEHPVQVRQNMAQFGWDVKPYEEKGMFAMVDAFTAGIG-KS---KEYEKYIVHD---LTDIREFIEVLRQAIR-D------INAKRVVVDSVTTL--YINKPAMARSIILQLKRVLA-GTGCTSIFVSQVSVGERG--F--GGPGVEHGVDGIIRLDLDEI--DGELKRSLIVWKMRGTSHS--MRRHPFDIDKG- | |||||||||||||
5 | 3bs4A | 0.14 | 0.12 | 0.87 | 0.52 | MRFsearch | -EELDREIGK----IKKHSLILIHEESSRGKDILFYILSRKLKSDNLVGMFSISYPLQLIIRILSRFGVDVIKYLENHRLAIVDTFGSFHGIM-------PGVWYLEGM--LSSETLPIKYAKAVEDHKKNLFEGRELYGFAISMSGYLEV-FTPEETLRYLETSAEVRKKYPRGTNFWLWEGVK------DKRVLLSVYRRADYVLKTRSSL--GENGIKRELLVIKTP---------KVRFEYEFKG | |||||||||||||
6 | 3bs4A | 0.13 | 0.11 | 0.89 | 1.33 | SPARKS-K | IEELDREIG----KIKKHSLILIHEEDSRGKDILFYILSRKLKSDNLVGMFSISYPLQLIIRILSRFGVDVIKYLENHRLAIVDT-----FGSFHGIMPGVWYLEGMLSSETLPIKYAKAVEDHKKVWMDLNLFEGREYGFAISMSGYLEV-FTPEETLRYLETSAEVRYGYPRGTNFWLWEGV------KDKRVLLSVYRRADYVLKTRSSLGE--NGIKRELLVIKTPKV---------RFEYEFKG | |||||||||||||
7 | 2dr3D | 0.12 | 0.10 | 0.87 | 0.76 | MAPalign | IPGVDEILHGG---IPERNVVLLSGGPTGKTIFSQQFLWNGLKMGEPGIYVALEEHPVQVRQNMAQFGWDVKPYEEKGMFAMVDAF-----TAGIGKSKEYEKYIV--HDLTDIREFIEVLRQAIRD-------INAKRVVVDSVTTLY--INKPAMARSIILQLKRVLAG-TGCTSIFVSQVSV-----GERGFGGPVEHGVDGIIRLDLDEI--DGELKRSLIVWKMRG----TSHSMRRHPFDI-- | |||||||||||||
8 | 2dr3D | 0.12 | 0.10 | 0.88 | 0.59 | CEthreader | IPGVDEILHG---GIPERNVVLLSGGGTGKTIFSQQFLWNGLKMGEPGIYVALEEHPVQVRQNMAQFGWDVKPYEEKGMFAMVDAFTAGIGKS-------KEYEKYIVHDLTDIREFIEVLRQAIRDI-------NAKRVVVDSVTTLYI--NKPAMARSIILQLKRVLAGT-GCTSIFVSQVSVGERG----FGGPGVEHGVDGIIRLDLDEID--GELKRSLIVWKMRG----TSHSMRRHPFDITD | |||||||||||||
9 | 3bs4A | 0.14 | 0.12 | 0.89 | 1.20 | MUSTER | IEELDREIG----KIKKHSLILIHEEDSRGKDILFYILSRKLKSDNLVGMFSISYPLQLIIRILSRFGVDVIKYLENHRLAIVDTFGSFHGIMPGVWYLEGML-----SSETLPIKYAKAVEDHKKVWMDNLFEGRELYGFAISMSGYLEV-FTPEETLRYLETSAEVRYGHPRGTNFWLWEGV------KDKRVLLSVYRRADYVLKTRSSLGE--NGIKRELLVIKTPKV---------RFEYEFKG | |||||||||||||
10 | 3dvlA2 | 0.11 | 0.09 | 0.82 | 1.47 | HHsearch | VVRLDEMCGG---GFFKDSIILATGTGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPES----------------------AGLEDHLQIIKSEIN-------DFKPARIAIDSLSALARG-VSNNAFRQFVIGVTGYA-KQEEITGLFTNTSDQFMG--AHSITDSHII--TDTIILLQYVEIR--GEMSRAINVFKMRGSW----HDKAIREFMISD | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |