Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MGGWKLEVFKMGVYMSFPVILFYYFNQPQYFEKWVVATKQQCFPPQDNENDRAIRQFIKERQAKQREELKRE |
1 | 4twkA | 0.06 | 0.06 | 0.86 | 1.00 | DEthreader | | GFLLVGDQLGTIFGKGIA-KVD--TF-K--WN--VS--TKIRSTIILFGYFAAVLSMIGDWLRVISAENLYF |
2 | 2dfsA | 0.08 | 0.08 | 1.00 | 1.33 | DEthreader | | KKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRN |
3 | 6snrA1 | 0.06 | 0.01 | 0.24 | 0.67 | DisCoVER | | -----------------AKWQQKMETSEKQAKKA-------------------------------------- |
4 | 5sy1A | 0.07 | 0.06 | 0.81 | 1.00 | DEthreader | | IGNLPFWLTLVLAALIQHVASRFLFIRKLNN--------------SYFLVVMIGVVLGIWRVVITALFNIVH |
5 | 1bpzA1 | 0.10 | 0.10 | 0.97 | 0.44 | CEthreader | | --KAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASAKKLPGVGTKIAEKIDEFLATGKLRKLEKI |
6 | 6wcjB | 0.06 | 0.06 | 1.00 | 0.48 | EigenThreader | | KWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKAFSSKQSRLRSVLMSLK |
7 | 2ia2A | 0.07 | 0.06 | 0.76 | 0.27 | HHpred | | ---------RLPAYATS-GRVLLAGLPDDELDAYLEKLDIQRLTERTITARDELKAAILAVRADG------- |
8 | 4ldsA1 | 0.16 | 0.12 | 0.79 | 0.43 | MRFsearch | | ---GWRWMLGLAVVPSVILLVGIYFMNEEAARQVMKIT----------YDDSEIDKELKEMKEINAISES-- |
9 | 5nrlV | 0.13 | 0.12 | 0.94 | 0.44 | FFAS-3D | | ----DMEVIKLTARYYIVEQMILNFMNSKTFTDFVAQYKRVYSFTGQEIKRTQYWEFEKDKDREHDKLVELC |
10 | 5cwcA2 | 0.15 | 0.15 | 0.99 | 0.71 | SPARKS-K | | EGYDISEACRAAAEAFKRVAEAAKRASSETLKRAIEEIRKRVAQREGNDISEACRQAAEEFRKKAEELKRR- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|