Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | EYPHLIVPINSSTPDTAYGTQYFGTVSSTVSTIFNFDIPSSDSGKTCSLIFLFPTKDQLETSDYTFSGDGKIDFSQLESAASESTTYNNAPGVKQDYGDFTVSPGNSYLISTFSCPAGQTVSYEMKEAGSTYLNFFEDYNP |
1 | 2hleA | 0.08 | 0.06 | 0.84 | 1.00 | DEthreader | | TLLNTLWVTFPQVD-QWEE-SRTYEVCDAHWLRTWVPRR---GAVHVYATLRF-----------TMLECETFTVFYYESDAD-TATALTPANPYIKVDTVAALKVNVKTLRLGPLSK-AGFYLAFQDQGACMALLSL---- |
2 | 2hleA | 0.07 | 0.06 | 0.85 | 1.00 | DEthreader | | LLNTLKWVTFPQVD-QWEELSRTYEVCDAHWLRTGWVPRR--GAVHVYATLRF-----------TMLEKETFTVFYYESDADTATA-LTPANPYIKVDTVAAHKVNVKTLRLGPLSK-AGFYLAFQDQ-GACMALLS---- |
3 | 2wo2A | 0.06 | 0.05 | 0.82 | 1.00 | DEthreader | | TLLDSLWIASPLEG-WEE--IRTYQVCNNNWLRTWITRE---GAQRVYIEIKF-----------TLRDKETFNLYYYESDND-KER--FIRNQFVKIDTIAAEKLNTEIRDVGPLSK-KGFYLAFQDVGACIALVSV---- |
4 | 4cu6A | 0.11 | 0.09 | 0.78 | 1.00 | DEthreader | | VDFQNWYFKLNANVSTWKKLDLPYDWGGEAWYRKTFKLDEKDLKKNVRLTFDG------------VY--MDSQVYVN---------------G-QLVGHYPNGY-NQFSYDITKLKDGRENVIAVHAVNKQSGIYEENYKD |
5 | 3j31Q1 | 0.11 | 0.07 | 0.66 | 0.51 | DisCoVER | | FDVV---------------YVDREYPVSNLNVFFEIGE--------RNSFSGL----------LINEGQAVIDVLLL-KKSHE-G----LPIEGTGIQLSAGQILKFYNV--P------IAEIIVEYDVSSNVKLKGTIH- |
6 | 6hpdA1 | 0.15 | 0.11 | 0.77 | 1.00 | DEthreader | | YNFVDWKFIKSNPDTWETI-SCPHTFRGTVWYRKHFKLPK-DDKKKVFIEFES-----------VR---QIADVYIN----------------GVHLGQNQTGF-IPFGFDLTPLKFGEENIIAVKVNNDTGGYRAPDLPQ |
7 | 4tlgA2 | 0.10 | 0.08 | 0.77 | 0.67 | CEthreader | | --------------QVRLQYEHTRSVGRGSSLQVENEILF--PGCVLRWQFAS--------------DGGDIGFGVFLKTKMGEQQSAREMTEVLPSQRYNAH--MVPEDGSLTCLQAGVYVLRFDNTYSRMHAKKLSYTV |
8 | 5a3lA | 0.11 | 0.09 | 0.81 | 0.72 | EigenThreader | | TAYGFDATIYYNANDRNVPGFNIWVNYYNMELKGYFKAD---VSGDYKLTLSHI--------------DDSSMLFFGKETAN--------EAPTDYSLFTIKPVNSEVISATQYLEAGKYYPVRIVFV--NALRFDDDFQN |
9 | 3jcoX | 0.12 | 0.08 | 0.65 | 0.24 | HHpred | | --------------------------------VIKFR------AGVCEYN---E-D------SRLCTPQGEIEIKPNEEEGFWDFEWRPTEKPVGLPISLILIPGETMWVPIKSSKSGRIFALVF-SSNERYFFWLQEKNS |
10 | 5teeA2 | 0.08 | 0.07 | 0.85 | 0.40 | MRFsearch | | ---KIMALGNE-------DGSIEIFQIPNLKLICTIQQHH---KLVNTISWHHEHGSQPELSYLMASGSAVIYVHNLKT--VIESSPESPVTITEPYRTLSGHTAKITSVAWSPH----HDGRLVSASYDGTAQVWDAL-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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