>PF09789 (316 residues) KRKLESKCQALLILTKEMGQCRSERDQFKLMAEQLRERYQGLKKQLHGQIPKNFDDSKGG LHRLGEVPLQALLVESREQTKCLQFEVDDLKQKLQDAWGDIKLLREQIARQRVGTTDEGI NTRHFPAHERESLVKQLEDFRVQYTQLERDLQQVLDEKQEQETERDAYKTKYERLNQELN YILKGDERRVVDLDALIMENKYLQERLKQMEEEKSIAMATVSKYKTLLERRKMKSALKLG QSRSGGLIISQKQVQQFLEDKSECSVTPQTVADIKALAGALLDTVNDKNLALSHQRKTNK ILGNRISELEKKIKTL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | KRKLESKCQALLILTKEMGQCRSERDQFKLMAEQLRERYQGLKKQLHGQIPKNFDDSKGGLHRLGEVPLQALLVESREQTKCLQFEVDDLKQKLQDAWGDIKLLREQIARQRVGTTDEGINTRHFPAHERESLVKQLEDFRVQYTQLERDLQQVLDEKQEQETERDAYKTKYERLNQELNYILKGDERRVVDLDALIMENKYLQERLKQMEEEKSIAMATVSKYKTLLERRKMKSALKLGQSRSGGLIISQKQVQQFLEDKSECSVTPQTVADIKALAGALLDTVNDKNLALSHQRKTNKILGNRISELEKKIKTL | |||||||||||||||||||
1 | 2tmaA | 0.11 | 0.09 | 0.90 | 1.84 | FFAS-3D | ---MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELV--------------------SLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQL--------VEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYE-EEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI | |||||||||||||
2 | 6yvuA | 0.13 | 0.13 | 1.00 | 1.15 | SPARKS-K | RESLLVDIQKYNQIQKQIETIQADLNHVTEELQTQYATSQKTKTIQSDLNLHKLDLAKRNLDANPSSQIIARNEEILRDIGECENEIKTKQMSLKKCQEEVSTIEKDMKEYDSSKLNELKKELKLLAKELEEQESESERKYDLFQNLELETEQLSSELDSNKTLLHNHLKSIESLKLENSDLEGKIRGVEDDLVTVQTELNEEKKRLMDIDDELNELETLIKKKQDEKKSSELELQKLVHDLNKYKSNTNRERSKQLNEKFQELRKKMNMIENVEKKEAALKTMIKTIEKDKMKIQETISKLNEYKRETLVKTWEK | |||||||||||||
3 | 2tmaA | 0.13 | 0.11 | 0.83 | 1.08 | CNFpred | ---MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKK-------------LKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLV---------------EEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKT-------------------VTNNLKSLEAQAEKY---SQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQ | |||||||||||||
4 | 5j1iA | 0.10 | 0.07 | 0.72 | 0.57 | DisCoVER | ISLVIRGTGAEEVLRAHEEQLKEAQ--AV--PA--TL----------------------------------------PELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQDVEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAMSQAVREQLRQE---QALLEEIERHGE-KVEECQRFAKQYINAIKDYELQLVTYKAQ-----LEKVQSGSESV---IQEYV---DLRTHYSELTTLTS-------QYIKFISE------------------- | |||||||||||||
5 | 6r9tA | 0.05 | 0.04 | 0.70 | 0.67 | DEthreader | --------------------------T-------TISSPVCQEQLVEAGRLVAKAVEGV-AAAVQALNELLQHVKAAESDLENSRKLLSAAKILAD-AT-KM--A---G--A--------HPDSEEQQQRLREAAEGLRMATNAAAQNAIK--KK-LVQRLEHAAKQAAASATQTIAAA-QHA-----ASTPKASAGPQP-LVQSCKAVAEQIPLLVQGVRGSPSAQLAAQEACGPL------------NYAGIAARDVAGGRSL-LTTNPTN-LDE-HRVQEGHGCAALVTKAGAL------------------- | |||||||||||||
6 | 6gy6A | 0.07 | 0.07 | 0.94 | 0.57 | CEthreader | HDHALSWSGVESKVQQQSIDLENAGKQITLTGDEIISVIDQMPIIERVKNKLGDLTDKQLAEITYTNDDKEIAVELGNILESMKKDIKRQQENTQKVKTAVSDFKLKLI--GGELSDGTIAQGLQPQISSKKKLMDDNNLSTTIKDLQSKIDEKNKEIDQFQKDYNKYVGLAF-------------SGMVGGIISWAITGGIFGDKAEKARKQKNKLIDEVKDLQSQVKDKSALQTSVQN-----LSLSFAGIHTSMVDAEEALNHLDFMWNTMLTQITTSRDKFDDIALKLTSFVIAFKQVIEPWRDVQGSAAQL | |||||||||||||
7 | 1yc9A | 0.09 | 0.07 | 0.73 | 0.77 | EigenThreader | AVVAATSELAAAEAESVAANAYAELARLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKAVAASVEAIQESIQLQKNALAALVRADITAARWRAEAAAQQVGIAQAQFYRLEGQLTSAEARYQEAVAQYNGTLVQALHEIADVVTSSQALQARINKTEQAVQQAEQALHIATNRYQGGLATYLDVLVAEESLLNNQRALVNLQSRAFSLDLALIHALG-------------------------------------GGFE------------------------------------------------- | |||||||||||||
8 | 4iloA | 0.14 | 0.09 | 0.67 | 0.57 | HHpred | ------------------------HDALQSILQELDIKMIRLMRVKKEHQ-----------N--ELAKIQALKTDIRRKVEEKEQEMEKLKDQIKGGEKRIQEISDQINKLENQQA-A-----VKKMDEFNALTQEMTAANKERRTLEHQLSDLMDKQAGSEDLLISLKESLSSTENSSSAIEEEIRE---NIRKI-------NEEGRSLLSQRTQLKELFSVYERLLNNKKDRVVVPIRVCSGCHIALTPQHENLVRKQDHFCEH-------------------------------------------------- | |||||||||||||
9 | 2tmaA | 0.13 | 0.12 | 0.89 | 0.48 | MRFsearch | KKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTE-------------DELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERL--------ATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDK------------YEEEIKVLSDKLKE---AETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI | |||||||||||||
10 | 6z47G | 0.13 | 0.11 | 0.81 | 1.63 | FFAS-3D | --------REIESLTQQFEEKAASYDKLEKTKNRLQQELDDLVVDLD--------------------NQRQLVSNLEKKQKKFDQMLAEEKNISSKYADERDRAEAEAREK---------------ETKALSLARALEEALEAKEELERTNKMLKAEMEDLVSSKDDVGKNVHELEKSKRTLEQQVEEMKTQLEELEDELQAAEDAKLRLEVNMQAMKSQFERDLQARDEQNEEKR--------------RQLLKQLHEHETELEDERKQRALAAAAKKKLEVDVKDLESQVDSVNKAREEAIKQLRKLQAQM--- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |