>PF09787 (306 residues) NLESSKQELIDYKQKATRILQSKEKLINSLKEGSGFEGLDSSTANSMELEELRHEKEMQR EEIQKLMGQIHQLRSELQDMEAQQVNEAESAREQLQDLHDQIAGQKASKQELETELERLK QEFHYIEEDLYRTKNTLQSRIKDREEEIQKLRNQLTNKTLSNSSQSELENRLHQLTETLI QKQTMLESLSTEKNSLVFQLERLEQQMNSTSGGSSNGSSINMSGIDNGEGTRLRNVPVLF NDTETNLAGMYGKVRKAASSIDQFSIRLGIFLRRYPIARVFVIIYMALLHLWVMIVLLTY TPEMHH |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | NLESSKQELIDYKQKATRILQSKEKLINSLKEGSGFEGLDSSTANSMELEELRHEKEMQREEIQKLMGQIHQLRSELQDMEAQQVNEAESAREQLQDLHDQIAGQKASKQELETELERLKQEFHYIEEDLYRTKNTLQSRIKDREEEIQKLRNQLTNKTLSNSSQSELENRLHQLTETLIQKQTMLESLSTEKNSLVFQLERLEQQMNSTSGGSSNGSSINMSGIDNGEGTRLRNVPVLFNDTETNLAGMYGKVRKAASSIDQFSIRLGIFLRRYPIARVFVIIYMALLHLWVMIVLLTYTPEMHH | |||||||||||||||||||
1 | 5nnvA | 0.14 | 0.07 | 0.51 | 0.58 | DisCoVER | -------------------------------------------------------------------------------KEAKIEDTRDKIQALVDELQQVLLVTSEELEKLEGRK--AIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAEEKL-------------------------------------------------------------------EAAKHKLNDKTKTIELIALRRDQRLDTYERE- | |||||||||||||
2 | 5xamA | 0.08 | 0.06 | 0.66 | 0.67 | DEthreader | -RIELVQD-ARSIIQQTARLETGETIADFKTGAKTFGDFTGKNV-L--MAV--VLDDQI--AL-IKI-VT--AA-ER--------------------------------Y---------IKEELARGKGNAGAGEHSTAAILDVNASHLLSALALYYSTGA-V-K-GFAVTLIIGVIASTFSNLV-AK-----------IKHTHFDF-----------------FRFDFIMGLIIA----------FTVASVAALLTLIGYSLNDSIIVSDRIRENAAINQTLSRTVMTSVSTMLPLISL------ | |||||||||||||
3 | 1u4qA | 0.10 | 0.09 | 0.92 | 0.52 | CEthreader | DLASVNNLLKKHQLLEADISAHEDRLKDLNSQADMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQG-------------------------LLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAK | |||||||||||||
4 | 5xszA | 0.05 | 0.05 | 0.95 | 0.70 | EigenThreader | FK--YPLYSMVFSIVFMVGLITNVAAMYIFMCSLKLRN----ETTTYMMNLVVSDLLFVLTLPLRVFYFVQQ--------NLLCKLSVSLFYTNMYGSILFLTCISVDRFLAIVYRNAKIVCAAVWVLVLSGSLPTGFMLNHLSKVVIFIETVGIPLMLNVVCSAMVLQTLRRNAAKSELDKAIGDEAEKLFNQDVDAAVRGILRNMLQQKRWDEAAVNLAKSKRVITTFRTGTWDAYLNKKKILRMIIVHLFIFCFCFIPYNVNLVFYSLVRTNCAAESVVRTIYPIALCIAVSNCCFDPIVYYF | |||||||||||||
5 | 6f1tX | 0.15 | 0.10 | 0.71 | 0.44 | HHpred | ------------------VIRQKEKLLARL-----------GKALLERNQDMSRQYEQMHKELTDKLERFENREGEWEGRVSELETDVKQLQDELERQQLHLREADREKTRAVQELSEQNQRLLDQLSRASEVERQL-------SMQVHALKEDFREKNSS-----------------TNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLL-QGTV------EELQDRVL-----ILERQGHDKDLQLHQSQLELQEVRLS-----YRQLQGGGGGGGGG-------------------- | |||||||||||||
6 | 6yvuB | 0.19 | 0.16 | 0.83 | 0.43 | MRFsearch | --SSSNKDLEDEKMKFQESLKKVDEIKAQRKEI-----KDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLSLKDKTKNISAEIIRHEKELEPWDLQLQEKSLLEETQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQG----------------------------------------EKNFTSAHLKLKEMQKVLNAHRQRAMEARSSLSKAQNKSKVLTALSRLQKS----- | |||||||||||||
7 | 6ewyA | 0.07 | 0.05 | 0.61 | 1.44 | FFAS-3D | --DPQTDTIAALIADVAKANQRLQDLSDEVQA------------EQESVNKAMVDVETARDNAAAAEDDLEVSQRAVKDANAAIAAAQHRFDTFAAATYMEIIATVTAAKTLSASSQAVMANLQRARTERVNTESAARLAKQKADKAAADAKASQD----------AAVAALTETRRKFDEQREEVQRLAAERDAAQARLQAARLVAWSSE----------------------------------------------------------------------------------------------- | |||||||||||||
8 | 6yvuA | 0.11 | 0.10 | 0.99 | 0.96 | SPARKS-K | NGETRMKMLNEFVKKTSEEIDSLNEDVEEIKLQKEKELHKSKENKENGLLNEISRLKTSLSIKVENLNDTTEKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQEQLSKQRDLYKRKEELVNAQLAKAKTELNEVSLAIKKSSMKMELLKKELLTIKEATKDNELNVKHVKQCQETCDKLRARLVEYPSRIKDLKQREDKLKSHYYQTCKNSEYLKRRVTNLEFNYTKPYFVHGVVGQLFQIDND---NIRYATALQTCAGGRLFN-VVVQDSQTATQLLERGRLRKRVTIIPLDKIYTRPISS | |||||||||||||
9 | 5j1iA | 0.12 | 0.09 | 0.82 | 0.91 | CNFpred | ---SRCQRCISELKDIRLQLEACETRTVHRLRLPLDKE------PARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLAL--------SPAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTIS-LVIRGTQGAEEVLRAHEEQLKEAQAVPATLPEL-----ATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGERDVEV---------------------------------ERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQI | |||||||||||||
10 | 1sjjA | 0.09 | 0.06 | 0.67 | 0.83 | DEthreader | HKPPKVQEKCQLEINFNTLQTKLRLS--N------------------R---P-AFMPSEGKMVSDINNAWGGLEQAEKGYEEWLLNEIRRLE-RLDHLAEKFRKARVEQICQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMLHVRRDQALMEEHARQNRLRKQFGDHYTMEHIRVGWEQLLTTIARTINEVENLTRDTGMMDCFRAEFARMS---------------------------------------------------------------------------- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |