>PF09777 (244 residues) CRRLLTAFAEGSATLSGCLARRARPVRLCQACGGLYRSLLTQYGDIARAVGNSSESHNCA KSILTSDRLQVVVTLSSFFNDTWEAANCANCIKNNSEGLSNSTQEFMDLFNKSLACFEHN LQGQAMDLSPNNYTEVCKNCNGTYKKLNDLYNKLQRLNRHGDESGHSAHLCIDVEDAMNI TRKLWSRTFNCSVPCSDTVPVIAVSSFILFLPVVFYLSSFLHSKQKKRILILPKRIQSNA SLVN |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | CRRLLTAFAEGSATLSGCLARRARPVRLCQACGGLYRSLLTQYGDIARAVGNSSESHNCAKSILTSDRLQVVVTLSSFFNDTWEAANCANCIKNNSEGLSNSTQEFMDLFNKSLACFEHNLQGQAMDLSPNNYTEVCKNCNGTYKKLNDLYNKLQRLNRHGDESGHSAHLCIDVEDAMNITRKLWSRTFNCSVPCSDTVPVIAVSSFILFLPVVFYLSSFLHSKQKKRILILPKRIQSNASLVN | |||||||||||||||||||
1 | 7jm7B | 0.48 | 0.39 | 0.82 | 1.00 | DEthreader | ERELLLDFANSSAELTGCLVRSARPVRLCQTCYPLFQQVVS-KM-DNI-SR---------S-CARSLLMQIVVILSEFFNTTWQEANCANCLTNNSEELSNSTVYFLNLFNHTLTCFEHNL--Q--------YSEVCKNCREAYKTLSSLYSEMQKMNELENK-A---THLCIVEDAMNITRKLWSRTFNCS-VPC-SD-TVPVIAVSVFILFLPVVFYLSSFLHSE-QK-------------- | |||||||||||||
2 | 7jm7B | 0.67 | 0.57 | 0.85 | 11.11 | HHpred | CRELLLDFANSSAELTGCLVRSARPVRLCQTCYPLFQQVVSKMDNISR---------SCARSLLMADRMQIVVILSEFFNTTWQEANCANCLTNNSEELSNSTVYFLNLFNHTLTCFEHNLQ----------YSEVCKNCREAYKTLSSLYSEMQKMNELENKAEPGTHLCIDVEDAMNITRKLWSRTFNCSVPCSDTVPVIAVSVFILFLPVVFYLSSFLHSEQK------------------ | |||||||||||||
3 | 7jm7B | 0.66 | 0.56 | 0.85 | 1.82 | MRFsearch | CRELLLDFANSSAELTGCLVRSARPVRLCQTCYPLFQQVVSKMDNISR---------SCARSLLMADRMQIVVILSEFFNTTWQEANCANCLTNNSEELSNSTVYFLNLFNHTLTCFEHNLQY----------SEVCKNCREAYKTLSSLYSEMQKMNELENKAEPGTHLCIDVEDAMNITRKLWSRTFNCSVPCSDTVPVIAVSVFILFLPVVFYLSSFLHSEQK------------------ | |||||||||||||
4 | 7jm7B | 0.67 | 0.57 | 0.85 | 2.15 | SPARKS-K | CRELLLDFANSSAELTGCLVRSARPVRLCQTCYPLFQQVVSKMDNISR---------SCARSLLMADRMQIVVILSEFFNTTWQEANCANCLTNNSEELSNSTVYFLNLFNHTLTCFEHNLQ----------YSEVCKNCREAYKTLSSLYSEMQKMNELENKAEPGTHLCIDVEDAMNITRKLWSRTFNCSVPCSDTVPVIAVSVFILFLPVVFYLSSFLHSEQK------------------ | |||||||||||||
5 | 7jm7B | 0.66 | 0.56 | 0.85 | 1.08 | CEthreader | CRELLLDFANSSAELTGCLVRSARPVRLCQTCYPLFQQVVSKMDNISRS---------CARSLLMADRMQIVVILSEFFNTTWQEANCANCLTNNSEELSNSTVYFLNLFNHTLTCFEHNL----------QYSEVCKNCREAYKTLSSLYSEMQKMNELENKAEPGTHLCIDVEDAMNITRKLWSRTFNCSVPCSDTVPVIAVSVFILFLPVVFYLSSFLHSEQK------------------ | |||||||||||||
6 | 7jm7B | 0.66 | 0.56 | 0.85 | 2.46 | FFAS-3D | CRELLLDFANSSAELTGCLVRSARPVRLCQTCYPLFQQVVSKMDNIS---------RSCARSLLMADRMQIVVILSEFFNTTWQEANCANCLTNNSEELSNSTVYFLNLFNHTLTCFEHNL----------QYSEVCKNCREAYKTLSSLYSEMQKMNELENKAEPGTHLCIDVEDAMNITRKLWSRTFNCSVPCSDTVPVIAVSVFILFLPVVFYLSSFLHSEQK------------------ | |||||||||||||
7 | 3p8cB | 0.07 | 0.05 | 0.71 | 0.83 | DEthreader | -QPSQQ-K-LAEKLTILNDRGVGL--------FDLTKN-------------------------------------------------------TMPGPALFVFMALSFARDEIIWLLRHADNMPKK-SA-DDF--IDKHIAELIFYMEELRAHVRKYGPVQVEDGEVVSLVEMLVESDLSIFCFYSRAFKMFCLMQARNILHLEIRFVNVLLQQTQTLYGMKFESAPALVVAALFTIDRLKEFL | |||||||||||||
8 | 5dmyA | 0.04 | 0.03 | 0.80 | 0.83 | DEthreader | NATGTHPYGYSPRPAKALIDVCNGVLVVE---E--VFDMWNYGKWFGQTI---------AGDN-AVLGGDKFDTSTINRDRVWDSTRPM-TYGDSMGDVVGTNYSGSETA-SA--IN--SR-----GIYNRTTLTSYDNSAAVASSAWYDVVQ-RDFV------------AG-T-YVWTGFFGIVDFPKDTYHIVISAPEGSTEGN-----ADADRKTI-TADGAGKLVGVNRKAVAKADGLS- | |||||||||||||
9 | 6q89A4 | 0.13 | 0.07 | 0.50 | 0.59 | DisCoVER | -----------------RFLRRLWTVYEYL-----------------------------------------------------KQGGAVKAFAGNQLELKDLRHKLHSTTAKVSDDY--------------GRRQQFNTAIAAVMELLNQYDKT--DT----GSEQGRAVAQEVLEAAVRL--LWPICETLWSE-----LNGAKLEAGW--PT--V-------------DEAA--LV------- | |||||||||||||
10 | 4xriA2 | 0.11 | 0.09 | 0.81 | 0.40 | MRFsearch | --EIAPQGDRIMQVLLQILSTCGGKSSVPEGVFAAISALANAAPFLYNALGNQEEPSLCSMAILGERSQPYCDNFMNYLLGNLRSTAILQCFGD---IASAIGGHFETYLTIVAQVLQQAATITA---GPDGSYEMIDYVISLREGIMDAWGGIIGAMKTSN---KTNVLQPYVESIFALLNSIANDP--------NRSEALMRASMGVIGDLADAY--------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |