Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | SSGTSFVLAAILTVLLFSGMQMYRQWLASSQLHTILGGYLGSVLFILILTAVGNIESIAFGKGFQTKLFPEVAVCLVTALFAAGMIHRVCTTTCLIFSLVALYYINRVSQATHERPAPVYTAPSKKKK |
1 | 6sgwB2 | 0.08 | 0.07 | 0.87 | 1.00 | DEthreader | | GAPNVLLAAAGVAAWSLISMAGS--PD------DRGIAVFTATAVTGVGVLLVAGAASWISSDIGCALVLLGIVTQAQLSA-MWA-RRVVSQAHQTGVIAAGVLLGVAGSVALVSASLVGL------- |
2 | 4he8L | 0.07 | 0.06 | 0.96 | 1.00 | DEthreader | | DSARKAFIVNRIGDLGFMLGMAILLYMLKNPDLLALAGLLLFLGAVGKSALWLPDAMAGPT--SALIHAATMVTAGVYLIARSS---FLYSVLVSYAIAVVGLLTAAYGALSAFGQDIKSGSTAPPVW |
3 | 6sgwB | 0.08 | 0.07 | 0.87 | 1.00 | DEthreader | | GAPNVLLAAAGVAAWSLISMAGS--PD------DRGIAVFTATAVTGVGVLLVAGAASWISSDIGCALVLLGIVTQAQLSA-MWA-RRVVSQAHQTGVIAAGVLLGVAGSVALVSASLVGL------- |
4 | 3rkoL | 0.02 | 0.02 | 0.95 | 1.00 | DEthreader | | AAAMKAFVVTRVGDVFLAFALFILELAHFGNNMLMWATLMLLGGAVGKSALQWLDAMAGPT--SAIHAATMVTAGVYLIAR-TH---GLFLMPVLHLVGIVGAVTLLLAGFAALVQDIKSGSVVKGVL |
5 | 5v7pA2 | 0.08 | 0.06 | 0.78 | 0.64 | DisCoVER | | IGLCVCILGEVLRKTAILTVQ--C--EKSSDHVLTVYAWFRHPSYVGWFYWSIGTQII-LINPLCIYTLASWMFFKERIYIEESMLFFQYCDYQQQVG-TGIPFIE---------------------- |
6 | 6tjvD | 0.05 | 0.05 | 0.91 | 1.00 | DEthreader | | QAAVKFLIYTAVSGILVLAAFLAMLTAGLAPTTQGILLLLLILGFGIKPHSWLDAYVASTP--A---G-GA-AKGAYGLVRFALG-YFPEAWAQFSLLAIVAAVGIAYGALAAIAQKDILVGET---- |
7 | 2cydA | 0.09 | 0.08 | 0.88 | 0.44 | CEthreader | | FAVLAMATATIFSGIGSAKGVGMTGEAAAAGQALILQLLPGTQGLYGFVIAFLIFINLGSDMSVVQGASLPIAFTGLFSGIAQGKVAAIFAAMVETYAILGFVISFLLVLNA---------------- |
8 | 6ajfA | 0.12 | 0.12 | 0.96 | 0.68 | EigenThreader | | GT----VIAAALPAIIGGLAIAGALGIMRLVAVVTLIGLGIAIDYGLFIVSRFREEIAE-GYDTEAAVRRTVMTSGRTVVFSATYAIIASVMLAAILSITLAAALAILGPRVDALGVTTLLKGFWGRL |
9 | 4pgrA | 0.16 | 0.12 | 0.73 | 0.26 | HHpred | | -GAYVVLEAFGSTFVIFAVLGTIGAKM--KKDLSFLWSFLLVAVLALAVVGIFNI---FSPL---NS-AAMMAYSVI---------------GTIVFSLYILYDLNQIKHRHITEDLIP--------- |
10 | 4pgrA | 0.17 | 0.13 | 0.79 | 0.22 | MRFsearch | | --AFVYTFAFVSGITLFPIVSHYASIA---GAYVVLEAFGSTFVIFAVLGTIGAKMK------KDLSFLWSFLLVAVLALAVVGIFNAYSVIGTIVFSLYILYDLNQIKHRH---------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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