>PF09772 (307 residues) IISTIKAILTRIIFSAHSLLAIWQVVALKSDIIYWALCGPLLLLLLEGIFTIMIKKTQEW RWFCPSVFLYLSSIVPAIWLLELDKVARRVGNMTSTNSTVYSPSNYSIPVGNTTIFITST NSSGVPPVATLLGQAGVTLSVTPDTWTTLIEQFLMLILIVGRWLLPKGDLTRDQLSQLLL VYIGTAADIIEFFDSYKDDSIAKIGFLVFLTLGIWSWSLMQFTIVLSATRGRRPRGSGSH HKEEHTDCCQNCCCGIDVWGIVLNVILQDAPFLTFRLLIIFQYKIINYMNVFFTCKNSLV IILQLYR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | IISTIKAILTRIIFSAHSLLAIWQVVALKSDIIYWALCGPLLLLLLEGIFTIMIKKTQEWRWFCPSVFLYLSSIVPAIWLLELDKVARRVGNMTSTNSTVYSPSNYSIPVGNTTIFITSTNSSGVPPVATLLGQAGVTLSVTPDTWTTLIEQFLMLILIVGRWLLPKGDLTRDQLSQLLLVYIGTAADIIEFFDSYKDDSIAKIGFLVFLTLGIWSWSLMQFTIVLSATRGRRPRGSGSHHKEEHTDCCQNCCCGIDVWGIVLNVILQDAPFLTFRLLIIFQYKIINYMNVFFTCKNSLVIILQLYR | |||||||||||||||||||
1 | 4he8F | 0.08 | 0.07 | 0.85 | 1.33 | CNFpred | LLDNLSGFMLLIVTGVGFLIHVYAIGYMGGDPGYSRFFAYFNLFIAMMLTLVLAD------SYPVMFIGWEGVGLASFLLIGFADSARKAFIVN---------IGDLGFMLGMAILWALYGTLSISELKEAMEGPLK----NPDLLALAGLLLFLGAVGKSAVWLPDAMAGPTPVSALIHAATMVTAGVYLIARSSF--LYSVLPDVSYAIAVVGLLTAAYGAL--------------------------SAFGQTDIKKIVAYSTISQLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLASGSVI | |||||||||||||
2 | 6e9nA1 | 0.06 | 0.03 | 0.54 | 0.62 | DisCoVER | -RRRYLTLVMIFITVVICYVDRANLAVAGYVFAFAWLYTLCQIPGGWFLDR--------VGSRVTYFIAIFGWSVATL-FQ--GF-------------ATGLMSLIGLRAITGIEATSWFPESAVGFYTSGQFGLLTLIIQWHWVFIVTGGIGIIWSLIWFKVYQ-PPRLT---------------------KG---------------------------------------ISKAELDYIRDGGGLV--DGD----------------------------------------------------- | |||||||||||||
3 | 6ei3A2 | 0.07 | 0.05 | 0.72 | 0.83 | DEthreader | -----------ERFSFYGM--------------------RNILVQFLIT----------APRDAEAKHILHSFMIGVFFFPLLGGWLADRFFGKYTIIWSLCAGHACLFSRSGFVGGL----GPSWAFGIPGILMIATVF-----------FFSLFDQKASTWVLQEQAMMHAWQILPYALLTFGEVLVSATGIEFAYSPPSMKGVVMSFWYLTTTVGNLWVLLSNVAVVTSHIA------------TGLSEAAFLMFFFAAFAFLAALAFGLYA-RY-MVDNYRPANL--F--------------- | |||||||||||||
4 | 5a63C | 0.10 | 0.07 | 0.73 | 0.61 | CEthreader | FVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVTDRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLAS---------------------------------------LSEDGRSPISIRQMAYVSGLSFGIISGVFSVINILADALGPYFLTSAFLTAAIILLHTFWGVVFFDACERRRYWALGLVVGSHLLTSGLTFLNP---------------------------------WYEASLLPIYAVTVSMGLWAFITAGGSLRSIQRSLL------------ | |||||||||||||
5 | 1jb0B | 0.08 | 0.07 | 0.91 | 0.82 | EigenThreader | SLHFQLGWHLACLGVITSLVAQHMYSLPPYAFIYTHHQYIAGFLMVGAFAHGAIFLVRDYDPAQNHLSWVSLFLGFHTLGLYVHNDVVVAFGTPEKQILIEPFDTLLSNPDSIASTAWPNYGNVWLPGWLDAINSGTNSTIGPGDFLVHHAIALGLHTTTLILVKGALDASAWDAFYLAMFWMLNTIGWVTFYWHWKHLGVWEGSVWAWMFLFGHLVWATGFMFLISWHERTPLANLVRWKDKPVALS----IVQARLVGLAHFSVGYILTYAAFLIASTAAKF----------------------- | |||||||||||||
6 | 2r6gF2 | 0.11 | 0.06 | 0.53 | 0.33 | HHpred | ---------KWSVLGLLGLLVGYLVVLMYAQ-GEYLFAITTLILSSAGLYIFANRKAYAWRYVYPGMAGMGLVLFPLVCTIAI------------------AFTNYSSTN-------QLTFERAQEVL----LDRSW---------------------------QA-G----------------------GTQPLLDGDGLTNNQS----------------GVKYRPNNQIGQSIGDEKLSPGTWKNFTRVFTQDFGLAAAIATLI---------------------------------------- | |||||||||||||
7 | 6i1rA | 0.15 | 0.11 | 0.75 | 0.52 | MRFsearch | --WYLVAALLTILTSSQGILTTLSQSN--YDYATIPFLAELFKLSVSGFFLWKECRTSPSVRMTKEWRSVRLYVVPSVIYLIHNNVQFATLTY-----------------------------------------------VDPSTYQIMGNLKIVTTGILFRLVLK-RKLSNIQWMAIVLLAVGTTTYLLGILSACLSALAGVYSLYWQNVQLYTFGVIFNMGWLIYGDFKA-------------------NGYSITTWMVVFNLG-----STGLLVSWLMKYSDNIVKVYSTSMAMLLTMVLSIYL | |||||||||||||
8 | 2g87A | 0.11 | 0.08 | 0.77 | 0.86 | FFAS-3D | MLAAYMFLLI-MLGFPINFLTLYVTVQHKKLLNYILLNLAVADLFMVFGFTTTLYTSLHGYFVFGPTGCNLEGFFATL--------------------------------------------------------------------GGEIALWSLVVLAIERYVMSNFRFGENHAIMGVAFTWVMALACAAPPLVTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRM-VIIMVIAFLICWLPYAGVAFYIFIFMTIPAFFAKTSAVYNPVIYIMKQFR | |||||||||||||
9 | 5y78A | 0.08 | 0.06 | 0.79 | 0.77 | SPARKS-K | LKVGFYFFLWYFFNFIFNIANKRTLNMWKY-----PWVLSTIQLGVGALYCTFLWVLGLRTGHTLGHAATCMSFSLVVKSAEPVFGAVGSALVLGEFFHPLTYLTL----------------------------------------VPIVSGVALSAATE-------LTFTWTGFITAMISNVAFVTRNITSKFTMVDFKNEKTLIAQNTYALITIISFFMELPFALLMEGFPPLVSAIAGVSK-----------AKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVF | |||||||||||||
10 | 6humF | 0.09 | 0.07 | 0.85 | 1.26 | CNFpred | VIDPLAALMLVIVTTVAFLVMLYSDGYMAHDPGYVRFFAYLSLFGSSMLGLVVSP------NLVQVYIFWELVGMCSYLLIGAAEAAQKAFVTN---------VGDFGLLLGMVGLFWATGTFDFAGMGDRLTELLLSPSLAAILAILVFLGPVAKSAQFHVWLPDA---GPTPISALIHAATMVAAGVFLIARMFPVFEQLPQVMTTIAWTGAFTAFMGATIAITQ----------------------------NDIKKSLAYSTISQLGYMVMGMGVGAYSAGLFHLMTHAYFKAMLFLGSGSVI | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |