Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | LRSMSEILIWGDQNDSSVFDFFLEKNMLLFFLKILRQKTGSYICVQLLQTLNILFENIRNETSLYYLLSNNHVNCIIVHKFDFSDEEVLAYYISFLKTLSFKLNKHTIHFFYNEHTNDFALYTEAIKFFNNPESMVRIAVRTLTLNVY |
1 | 1ialA | 0.09 | 0.08 | 0.93 | 1.33 | DEthreader | | TWTMSNITAGRQ---D-QIQQVVNHGLVPFLVGVLSKAD-FKTQKEAAWAITNYTSGG-TVEQIVYLVHCGIIEPLM-NLLSAKDTKIIQVILDAISNIFQAAEGETEKLSIM---EECGGLDKIEALQRHENESVYKASLNLIEKYF |
2 | 1ialA | 0.06 | 0.06 | 0.96 | 1.33 | DEthreader | | QEATWTMSNITAGRQD-QIQQVVNHGLVPFLVGVLSK-ADFKTQKEAAWAITNYTSGG-TVEQIVYLVHCGIIEPLM-NLLSAKDTKIIQVILDAISNIFQAAEGETEKLSIM--IEECGGLDKIEALQRHENESVYKASLNLIEKYF |
3 | 1ialA | 0.06 | 0.06 | 0.96 | 1.33 | DEthreader | | KEATWTMSNITAG-RQDQIQQVVNHGLVPFLVGVLSK-ADFKTQKEAAWAITNYTSGG-TVEQIVYLVHC-GIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEGETEKLSIMI-EECG-GLDKIEALQRHENESVYKASLNLIEKYF |
4 | 4uaeA3 | 0.09 | 0.08 | 0.93 | 1.33 | DEthreader | | VWFLSNITAGNQ---Q-QVQAVIDANLVPMIIHLLDKGD-FGTQKEAAWAISNLTISG-RKDQVAYLIQQNVIPPFC-NLLTVKDAQVVQVVLDGLSNILKMAEDEAETIGNL---EECGGLEKIEQLQNHENEDIYKLAYEIIDQFF |
5 | 4uaeA3 | 0.08 | 0.07 | 0.96 | 1.33 | DEthreader | | NEAVWFLSNITAGNQQ-QVQAVIDANLVPMIIHLLDKGDF-GTQKEAAWAISNLTISG-RKDQVAYLIQQNVIPPFC-NLLTVKDAQVVQVVLDGLSNILKMAEDEAETIGNL--IEECGGLEKIEQLQNHENEDIYKLAYEIIDQFF |
6 | 4plqA | 0.09 | 0.09 | 0.93 | 0.40 | HHpred | | -EQILQEALWTLGGGNEQIQAVIDAGALPALVQLLSSP-NEQILQEALWTLGNIAS--GGNEQIQAVIDAGALPALVQLLS-SPNEQILQEALWTLGNIASG-GNEQIQAVIDA-----GALPALVQLLSSPNEQILQEALWTLGNIA |
7 | 4hxtA | 0.12 | 0.11 | 0.92 | 0.64 | DisCoVER | | KEAARALAN-IASGPDEAIKAIVDAGGVEVLVKLLT-STDSEVQKEAARALANIASG--PDEAIKAIVDAGGVEVLVKL-LTSTDSEVQKEAARALANIA-SGPTSAIKAIV-----DAGGVEVLQKLLTSTDSEVQKEAQRALENI- |
8 | 2ynsA | 0.11 | 0.10 | 0.92 | 0.35 | MRFsearch | | LRTVGNIVTG----DDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAG--NKDQIQAVINAGIIGPLVNLL-QTAEFDIKKEAAWAISNATSGGSHDQIKYLVSE-----GCIKPLCDLLICPDIRIVTVCLEGLENIL |
9 | 2ynsA | 0.09 | 0.09 | 0.93 | 0.92 | SPARKS-K | | LIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAG--NKDQIQAVINAGIIGPLVNLTAE---FDIKKEAAWAISNATSGGSHDQIKYLVSEG-----CIKPLCDLLICPDIRIVTVCLEGLENIL |
10 | 4rv1A | 0.12 | 0.11 | 0.93 | 0.63 | MAPalign | | QKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLT-STDSEVQKEAARALANIAS-G-PDEAIKAIVDAGGVEVLVKL-LTSTDSEVQKEAARALANIAS-GPDEAIKAIV-----DAGGVEVLVKLLTSTDSEVQKEAARALANIA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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