>PF09753 (251 residues) RLELNLVRLLCRCEALAAEKRDPSEWRLEKYVAALEEMLQALKEQPSKPAPEMLNEYSRK VDFLKGMLEAEKLSSSSEKALANQFLAPGRTPTTTKERVPATKTVHLQTRARYTGEMRSE LLGTESSATSGSGDLNLRKRTGLGTDEKQSAAELDAVLQHHHSVQEKLAEEMLSLARSLK NNTLAAQNVIKQDNQTLSHSIKMADQNFEKLKTESERLEQHAKKSVNWLLWIMLIFVCFI FISMILFIRIF |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | RLELNLVRLLCRCEALAAEKRDPSEWRLEKYVAALEEMLQALKEQPSKPAPEMLNEYSRKVDFLKGMLEAEKLSSSSEKALANQFLAPGRTPTTTKERVPATKTVHLQTRARYTGEMRSELLGTESSATSGSGDLNLRKRTGLGTDEKQSAAELDAVLQHHHSVQEKLAEEMLSLARSLKNNTLAAQNVIKQDNQTLSHSIKMADQNFEKLKTESERLEQHAKKSVNWLLWIMLIFVCFIFISMILFIRIF | |||||||||||||||||||
1 | 1vt4I | 0.05 | 0.03 | 0.71 | 0.64 | DisCoVER | YTDGGGGGGGGGGGGGGGGGGGGGGGGGG-GG--GGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGG------------------------------------------------GGG--GG-GGGGGG--GG--G--GGGG-------- | |||||||||||||
2 | 3o0rB | 0.08 | 0.05 | 0.67 | 0.83 | DEthreader | QVA--YF-A---F------NVARMVHTNLLIVWLFG-MG--YY--EELSPKLAWILFWVFAAAGVLTILGYLLVP----GLARL-----------------G----LW-TMQPTISKAGIVIVAL---FNGMMTLIGLLFLFYNDKWWWVHLWVEGVWELIMGAILAFVLVKITGRDYPNR--------------------------------------TQLTAHGHMAFYAYAMIVMTIISYAMPRLGIG | |||||||||||||
3 | 6tnfB3 | 0.09 | 0.08 | 0.95 | 0.51 | CEthreader | DFNSKETQLLITILSTLSKLLDPGSQQFLQFLTWTVKICKE----------NALEDLSCCKGLLTLLFSLHVLYK--SPVSLLRELAQDIHACLGDIDQDVEIESRSHFAIVNVKTAAPTVCLLVLGQADKVLEEVDWLIKRLTIQTQALEKGVILQLGTLLTVFHELVQTALPAGSCVDSLLRSLSKTYAILTSLIKHYIQACRSTSNTVPGRLEKLVKLSGSHLTPQCYSFITYVQRDTKPIPNLIFAI | |||||||||||||
4 | 4n5cA | 0.05 | 0.05 | 0.97 | 0.83 | EigenThreader | TKLVEKILFNCLGILFFHRG---QFQESQRCLLHSLKIHNNT---AKTALEQYDRYLIVENLYYRGLVSQDINIQNVFYKELLAHVDTIPPESN--GLLFEYISLIVAKLRFNQIQDLAENFKTSEKTFQSIEVSKTAFLFQNLSDNSFKRESILNFVNFVKYNDKYYQLHNISKVLTNAWSTLYEIRKYQLDFLVSLTSYLCNAEEKALRELQFKYSYTLAQQTAIKTLESLRWQFIHLKLTQLALIEEI | |||||||||||||
5 | 3hd7B | 0.07 | 0.03 | 0.38 | 0.59 | HHpred | -----------------------------------------------------------------------------------------------------------------------------------------------------------QALS-EIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVKSKARRKKIMIIICCVILGIIIASTIGGI | |||||||||||||
6 | 6q0xA | 0.07 | 0.05 | 0.73 | 0.43 | MRFsearch | --MELWYRITLLLERHEKR-----IMQMVHERNFFETLVDNFSEVTILDINNNLSIIKKHLETTSSICKQET----------------------------------EEISGTLSPKFKIF---------------------------TDILLSLRSLFERYKIMAANNVVELQRHVELNKEKLERIKKIIQKDRRSIIEQSNRAWLIRQCILEEFTIFQETQFLITRAFQDWAKLNSNHAGLKLNEWEKLV | |||||||||||||
7 | 6ewyA | 0.09 | 0.07 | 0.77 | 1.05 | FFAS-3D | PQTDTIAALIADVAKANQR-----LQDLSDEVQAEQESVNKAMVD-VETARDNAAAAEDDLEVSQRAVKDANAAIAAAQHRFDTFAAANGPSVSYLSASSPDEIIATVTAAKTLSASSQAVM--------------------------ANLQRARTERVNTESAARLAKQKADKAAADAKASQDAAVAALTETRRKFDEQREEVQRLAAERDAAQARLQAARLVA-------------------------- | |||||||||||||
8 | 4tqlA | 0.14 | 0.12 | 0.88 | 0.91 | SPARKS-K | -------------YKQMVQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQG-----------GDKQKMEELLKRAKEKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKELLEKIKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVAEELIKKILQLIEKAKEIAEKVLKG----- | |||||||||||||
9 | 3edvA | 0.08 | 0.06 | 0.71 | 0.72 | CNFpred | IGQERVDTVNHLADELINSGH-SDAATIAEWKDGLNEAWADLLELI--AASYELHKFYHDAKEIFGRIQDKHK--------------------------------------------------------------------KLPEELGRDQNTVETLQRMHTTFEHDIQ-ALGTQVRQLQEDAARLQAAYGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEA | |||||||||||||
10 | 6mu1A | 0.05 | 0.04 | 0.79 | 0.83 | DEthreader | EERDVRKILLAILDCV-----I--MDTKLKIIILQIL--R----------------HGGRTFLRVLHLQLLFFDHCKVLQLVVESILFIMQRQINQTLETLKNAKLNVGHNIYIHGGDEALEFA---------L--SFSSISFAGNVCNKIIFLMSFVGNCG--------NMWHYLFWFPRMRAMSLVSS-SEGEQNELRNLQEKLESTMKLVTNLSGQLSELKDQMTEQRKQKQRIGLLGH--P------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |