>PF09746 (366 residues) HLINVRDRLFHKLFFKMAVTYARLFPPSFRRVLKFFVLLKALFVLFILAYIHIAFSRSPI NCLEHVRDKWPRDGILRVEIQRNSSRAPIFLQFCGVEKFPGMVVESTTEEEEEEEEEMTV DMFENSSIKFELDIEPKVFLKPSRVSSTELPHNDSQEFSFSDAATKVWPQEEYIVEYSLE YGFLRLSQSTRQRLSIPVMVVTLDPTRDQCFGDRFSRLLLDEFLGYDDILMSSVKALAEN EENKGFLRNVVSGEHYRFVSMWMARTSYLAAFVIMVIFTLSVSMLLRYSHHQIFVFIVDL LQMLEMNMTIAFPAAPLLTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCH TNTSKR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | HLINVRDRLFHKLFFKMAVTYARLFPPSFRRVLKFFVLLKALFVLFILAYIHIAFSRSPINCLEHVRDKWPRDGILRVEIQRNSSRAPIFLQFCGVEKFPGMVVESTTEEEEEEEEEMTVDMFENSSIKFELDIEPKVFLKPSRVSSTELPHNDSQEFSFSDAATKVWPQEEYIVEYSLEYGFLRLSQSTRQRLSIPVMVVTLDPTRDQCFGDRFSRLLLDEFLGYDDILMSSVKALAENEENKGFLRNVVSGEHYRFVSMWMARTSYLAAFVIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMTIAFPAAPLLTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTNTSKR | |||||||||||||||||||
1 | 4phuA | 0.10 | 0.05 | 0.54 | 0.65 | DisCoVER | QLSFGLYVAAFALGFPLNVLAALNL-GCSDLLLTVSLFAPLGPARFSLSLLLFLPLTACFGCLRAL---------ARGSNIML----------------RID----EG--------------------------------------------------------------LRLKIYKDTEGYYTIGIGHLLTKYDSLDAVRRAALINMVFPNRAKRVITTFRTGTWDAYHRRKLRAA-------WVAGGALL--TL-LLCVGPYNASNVASF----------------------------------------------------------YPNLSWRKLG------LITGAWSVVLNPLVTGYL-- | |||||||||||||
2 | 5nd1A | 0.07 | 0.05 | 0.66 | 0.67 | DEthreader | -------------------------AWR--AW-LH--VG--LNMA-KH--HVRIRSSAAMDFGTHRMVT-VEMGFGVRMHNLGENDA-----------STADTYL------------VPAWLAQLTGREYTLWKGRHSK--------------------YLKGFEGLGACAEFLLANSGHHGVTADH--YAQNQALFLAP-TFTKAQ----------------HFAITTIGHMVNLSPF---LVQGVQWDMNDEG--------LLTATYALGAMASLAHVCEQGGT-GEEMSAIEVVTVATDLF-RKVVMT--------------HSSQEALFAQQAYGPFVDVQLARIRSSFWESGCPVQFPVML | |||||||||||||
3 | 5uj8A | 0.09 | 0.08 | 0.91 | 0.48 | CEthreader | ----------------------------KLRFETYQLIWQQMKSENERLQEELNKNLF-DNLIEFLQKSHSGLREIPTAALVLGVNVTDHDLTFGSLTEALQNNVTPYVVSL-----QAKDCPDMKHFLQKLISQLMDCCVDIKSYMTVTQKTDPKMLSKKRTTSSQWQSPPVVVILKVLQDFIIISSQHLHEFPLILIFGIATSPHRLLPHAVSSLLCIELFQSCKEHLTTVLDKLLLTTQFPFKINEKVLQVLTIFLYHDFSVQNFIKGLQLSLLEHFPLSVLCCNLPEAKRRINFLSNNQCENIKQASEKQVALLTNERYLKEETQLLLENLHVYHMNYFLVLRCLHKFTSSLPKYPLGRQIR | |||||||||||||
4 | 5b5eB | 0.07 | 0.05 | 0.77 | 0.65 | EigenThreader | ----------------------------------------------------------GLPWYRVHTVLINDIAA------HLMHTALVAGWAGSMALYELATFDPSDPV----LNPMWRQGMFVLPFMARLGVTGSWSGWSITGETGIDPGFWSFEGVALAHIVLSGLLF--------------LAACWHWVYWDLELF----RDPRTGEPALDLPKMFGIHLFLAGLLCFGFGAFHLTGLFGPGMWVSDTGSVQPVAPDGFNGGVVAHHIAAGIVGIIAGLFHILVIAAVFFAAFVVAGTMWYGSATTGPTRYQWDSFQQEINRRVQASLASGATLEEAWSAIPEKLAFYDYIGNNPAKGGLFR | |||||||||||||
5 | 6drjA | 0.14 | 0.11 | 0.80 | 0.37 | HHpred | ---------LHPAMF-SALVGD--KPEFVRLLLENGVCVREFLEREETLCE---LYSHLPSCLAKRVQGLPGSR--K-------VCLSHVSELYIASRYQCRDCIAAALRESGDDSEEASECHSWDAQRAKLIRISPSWGRSTCLWLALEAHDK-SFIAHSALLTQIWCPLIYFLTFRRDEDIQRQAERTQQKL----------LKPLNCSSSPQVKFYWSYFSWRELLLYVWLTSLVCEE-----IRQLYHDFDSGF---RRKAKMYWNILDVLSIVLFIAGLICRLQAGKFIIFCLRLMAIFSISRTL----GPKII----IVR--RMML----D-LFFFMFLLSIWVVA-------------- | |||||||||||||
6 | 6nf6A | 0.13 | 0.07 | 0.53 | 0.32 | MRFsearch | ----KSGQLFSGLLALNVVFLGSAFAITLADVWILLSILKVLCLCWIIYYLLGT---------------------------------------------------------------------------------------------------------------------------------------SRQPHAVAPVWIRG----------------SLLLFGTFSILLNVFQIGYSVI-------------QINCKSKVEIVFPSIEILFVATQAFFWLLAVTNDSIHMYCLICCSVLYVMWKNVGRFGPLLGAAAVIIGICVFMMYQIQFVLYYSYYIVLLPLMCVVAIIGTIIHTL----- | |||||||||||||
7 | 5z1fA | 0.10 | 0.09 | 0.92 | 0.70 | FFAS-3D | ------DTAVHFVFLSTVLGIFACSSLLLLPTLLPFLGAVYWISLVTYFFLWKAYKHVSSLRAQALMSADVKPEQFAILVRDMPAP-------------------PDGQTQKEFIDSYFREIYPETFYRSLVATENSKVNKIWEKLEGYKKKLARLINESVAKLEAEKQQTAAVVFFTTRVAAASAAQSLHCQ-MVDKWTVTEAPEPRQLLWQIIRQYFIYFFVAVTILFYMIPIAFVSAITRTSFLPQIALIKAEGIPSQSHAIRAASGKYFYFSVFNVFIGVTLPKSATFFLTYVAELSRIIPLWYPGDLSYATRVPGDMLILTITFCYSVIAPLLIFGITYFGLGWLVLRNQALKVYVP---- | |||||||||||||
8 | 6y5rA1 | 0.10 | 0.10 | 0.95 | 0.76 | SPARKS-K | YLGTTFAAAMYILGAIEIFLVYIFIGVRYVNKFASLFLACVIVSILAIYAGAIKSSFAP-----------PHFPVCMLRTLSSRHIDVCSK---TKEINNMTVPSKNSSQFFNATCDEYFVHNNVTSIQGIPGLASGIITE----NLWSNYLPKGEIIEKPSAKSSLGSLNHEYVLVDITTSFTLLVGIFFPSV-TGIMAGSNRSGDLKDAQKSIPIGTILAILTTSFVYLSNVVLFGACIEGVVLRDKFGDAVKGNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKLRVFGHSKANGEPTWALLLTAAIAELGILDLVAPILSMFFLMCYLFVNLACALQTLLRTPNWRPRFR | |||||||||||||
9 | 7d3uD | 0.10 | 0.08 | 0.73 | 1.01 | CNFpred | ---SALMLTVTSLLTLTCAAFAVAAGEAYKRFYPPLVLLVTAGVNGALLTGDLFNFFVFVEVMLLPSYGL----MMITRSGRASVVGVAASRLYISV--------------------------------------------------------------------------NLLASTILLIGVALIYGVT-----GTVNIAQLHG---AASEDTAVAVATALVL-FALAIKAAVVPV------HGWLARAY-PKMSPAVTAMFSGLHTKIAIYAIYRIYAVI-VGVVVFSATMLIGVLGAVGEAAPRSILAFHMVSQIGYILLGVALFGLTAGIFYLLHHMIVKAALFLAIGAIEVRYGPRRLGQL | |||||||||||||
10 | 3p8cB | 0.04 | 0.02 | 0.64 | 0.67 | DEthreader | ---------------------------------------------------------------------------------FRDE-----RERRKFLRSALKELATVLQLLPKALFVVYGPVMQ---V-LSALNDESIIMS--V-----MTSLSFMRWMNTIIFHKMMLVTSDLS--------------------RYSIAFLCHFM-C-----CPEERHHI-GDRSLSLCNMFLDEMAKQANLILCIFTPREYLTSHLERFTSIVQDEPTITSTGKFLSESLMWHISSQVAELKKLVVENVDVLTQMQALFKRLSSVDSVLKRMTIIGVILSFRSLAQEPCLAKAINQIAALDRLKEF--L----- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |