>PF09726 (693 residues) KRRNADCSKLRRPLKRNRITEGIYGSTFLYLKFLVVWALVLLADFVLEFRFEYLWPFWLF IRSVYDSFRYQGLAFSVFFVCVAFTSDIICLLFIPVQWLFFAASTYVWVQYVWHTERGVC LPTVSLWILFVYIEAAIRFKDLKHFHVDLCRPFAAHCIGYPVVTLGFGFKSYVSYKMRLR KQKEVQKENEFYMQLLQQALPPEQQLIQRQEREAEEAAAAAAASKSIHDVDSPAVAQNGS AGGKKPSSNTLPELEYREKERGKNESKKQHNHNQNHHSSTSSSILPSVDNKAQEMEYMEN HVNSKRLSSSDLLGSTENLLKDEHSSSSSSSTSSNSNKNYKNASGGGGGGGSSSPRGHGT ANGSVPSSSGPSSSASSSSKGDRKQKYGGGKNSASHRDPVENCIPNNQLSKPEALVRLEQ DVKKLKADLQASRQTEQDLRSQLGSLGTSERSIRSELGQLRQENELLQNKLHNAVQAKQK DKQTLGQLEKRLKAEQEARAAAEKLLAEEKKRKKLEEATAARAVALAAATRGECTESLRR RISELEAECKKLTLDIKVKEDQIRELELKVQELHKYKENEKDTEVLMSALSAMQDKTQHL ENSLSAETRIKLDLFSALGDAKRQLEIAQGQILQKDQEIKDLKQKIAEVMAVMPSVVYSA DTGSMTPVTPHYSSKFMDTSPSGLDPNASVYQP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | KRRNADCSKLRRPLKRNRITEGIYGSTFLYLKFLVVWALVLLADFVLEFRFEYLWPFWLFIRSVYDSFRYQGLAFSVFFVCVAFTSDIICLLFIPVQWLFFAASTYVWVQYVWHTERGVCLPTVSLWILFVYIEAAIRFKDLKHFHVDLCRPFAAHCIGYPVVTLGFGFKSYVSYKMRLRKQKEVQKENEFYMQLLQQALPPEQQLIQRQEREAEEAAAAAAASKSIHDVDSPAVAQNGSAGGKKPSSNTLPELEYREKERGKNESKKQHNHNQNHHSSTSSSILPSVDNKAQEMEYMENHVNSKRLSSSDLLGSTENLLKDEHSSSSSSSTSSNSNKNYKNASGGGGGGGSSSPRGHGTANGSVPSSSGPSSSASSSSKGDRKQKYGGGKNSASHRDPVENCIPNNQLSKPEALVRLEQDVKKLKADLQASRQTEQDLRSQLGSLGTSERSIRSELGQLRQENELLQNKLHNAVQAKQKDKQTLGQLEKRLKAEQEARAAAEKLLAEEKKRKKLEEATAARAVALAAATRGECTESLRRRISELEAECKKLTLDIKVKEDQIRELELKVQELHKYKENEKDTEVLMSALSAMQDKTQHLENSLSAETRIKLDLFSALGDAKRQLEIAQGQILQKDQEIKDLKQKIAEVMAVMPSVVYSADTGSMTPVTPHYSSKFMDTSPSGLDPNASVYQP | |||||||||||||||||||
1 | 6yvuB | 0.14 | 0.07 | 0.51 | 1.26 | FFAS-3D | ------------------------------------------------------------------------------------------------------------------------------------VENIAQMKPKEKESDDGLLEYLEDIIG---------TANYKPLIEERMGQIENLNEVCLEKENRFEIVDREKNSLESGKETALEFLEKEKQLTLLR----------------------------------------------------SKLFQFKLLQSNSKLASTLEKISS----------------------------------------------------------------------------------------------------------SNKDLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTEKERSILDDIKLSLKDKTKNISAEIIRHEKELEPWDLQLQEKESQIQLAESELSLLETQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEARS------------------------------------------ | |||||||||||||
2 | 6yvuB | 0.08 | 0.08 | 1.00 | 1.47 | SPARKS-K | EKESDDGLLEYLEDIIGTANYKPLIEERMGQIENLNEVCLEKENRFEIVDREKNSLESGKETALEFLEKEKQLTLLRSKLFQFKLLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLSLKDKTKNISAIRHEKELEPWDLQLQEKESQIQLAESELSLLEETQAKLKKNVETLAKKTHKQELQDLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRARSSLSKAQNKSKVLTALSRLQKSGRINGNKLGYARFILLDRLRQFNLQPISTPENVPNNVAYGKKRGKLIDISGTNHVAKGLMKLKYTPEEVDKIERELSERENNFRVASDTVHEMEEELKKLRDHEPDLESQISKAEMEADSLASELTLAEQQVKEAEMAYVKAVSQLNVVMKNLERLRGEYNDLQSETKTKKEKIKGLQDEILQMQNSKVESVCQKLDILVAKLKKVKSASKKSGGDVVKFQKLLQNSERDVELSSDELKVIEEQLKHTKLALAENDTNMNETLNLKVELKEQSKEQMEDMEESINEFKSIEIEMKNKLEKLNSLLTYIKSEITQQEKGLESEIKDAETSCLSEDELRELDVELIESK | |||||||||||||
3 | 5mqfM | 0.10 | 0.09 | 0.91 | 1.00 | MUSTER | ------------------------FSVKCWLRYIEFKKPRLNQLYERALKSYKLWYRYLKARRAQVKHRCVTDVNNCHERAFVFMHKMPRLWLDYCQFLMVTHTRRTFDRALRALPIT---QHSRIWPLYLRFLR-------SHPLPETAVRGYRRFL-SP--------ESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSDYYIRSGHFEKEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLEDNGQLDDARVILEKATKVNFKQVDDLASRHENYDEALRLLRKATALPARRVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDQIVINYAMFLEEHKYFEESFKAYERGISLFKNVSDIWSTYLTKFIARYERARDLFEQALDGCPPKYAK---TLYLLYAQLEEEWGLARHAMAVYERATRAVEPQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLDEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPR-GAFWQTWKDFEVRHGNEDTIKEMLRIRRSVQATYNTQV---------------- | |||||||||||||
4 | 6tpiA | 0.07 | 0.03 | 0.39 | 0.57 | DisCoVER | ---RASLLQLQEEAISEATKLTQNTLNQLNKQIDEMNASILE-QQKAAQERSLGIQLILSGEESQRGQRLQAYFGYLNQARQETIAQLKQTREEVAMQRAELEEKQSEQQTLLYEQQQKL-------------------------------------------------------------------------TQALNERTLAGLESSIQQGQQQLSELRANEAAAAEASLMSRTGGLQAFWP---VRG--PTLHRYGEQLQGELRWKGMVIGASEGTEVKAIADGR---------------------------------------------------VILADW--------LQGYGLVVVVEHGKGDMSLYGYNQSALVSVGSQVRAGQPIALVYFEIRRQGAVNPQPWLG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
5 | 6reyc | 0.05 | 0.03 | 0.56 | 0.67 | DEthreader | -------------------------FVPQK--EIVY------------------------------------------------NKLL-------------------------------PYAERLDAESDLQLAQIKCNL----------LE-WPGGLFWTRKLSYFSKEDHVLFIKLLY---------------------------MMQGFARLLILLLPWPLYMVLVENIKTLVK-------------A-MLEEWRPLM-C---P-F------DVTMQKAITYFEI--FLPTSLGFKLWFDELIGLWVSVQNLPQWEGQLVNLFARLA--IFTRILRS------A-IWITAMMVQHLA----KLLQRLNSVRRLLDVFVCIIALQNALMRVCVIGV-R---SGTFSTL-----S--------------------------------------NLLHHLLRSTTLIYPTEPLWNLGIQWHV-PS------SE-EVSF-AFYLL-----F--L--PEL-VKLQHCGDGKLEMS---RDD-ILQSLT-VHNCLI-SGNLLPPLKGETKLYT----------------G-LEYDLSRENHREDLLQFHKEFDSRW--------------------ALLIDRVMLQHELRTLTVECQTFFAALGAYNFCCIGVCLANLHDWDCI-------QYE-- | |||||||||||||
6 | 6k7gA | 0.07 | 0.06 | 0.94 | 0.57 | CEthreader | VYTGHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGKDWYLNLNYGGASNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTAAMARTSNLNEELGQVKYITCNVMQFKKCTIAGVAYGQNFSDSSLLENLQNNHPTAPIICEFLTMMAVCHTAVPERERDKIIYQAASPDEGALVRAAKQLNFVFTGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVRTPSGKLRLYCKGADTVIYDRLAETSKYKEITLKHLEQFATEGLRTLCFATAIQETAINIGHSCKLLKKNMGMIVIDFALIIDGAVICCRVSPLQKSEVVEMVKKQVKVVTLAIGDGANDIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMIHGAWNYNRVSKCILYCFYKNIVLYIIEIWFAFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKENMLKYPELYKTSQNALDF------------------------------NTKVFWVHCLNGLFHSVILFWFPLKALQYGTAFGNGKTSDYLLLGNFVYTFVVITVCLKAGLETSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAIPMAPDM-SGEAAMLFSSGVFWMGLLFIPVASLLLDVVYKVIKRTAFK---------- | |||||||||||||
7 | 6gmhQ | 0.06 | 0.05 | 0.93 | 0.85 | EigenThreader | -------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------GGGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVEAMQ---AESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDGHLKKVTEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADEILNNVGALHFRLGGEAKKYFLASLDRAYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHDCYLRLGAMARDKYEASDWFKEALQINDAWSLIGNLHLAKQEWGPGQKKFERILSMLALGNVWLQTLHREKEKRHQDRALAIYKQVLRNDYAANGIGAVLAHKARDVFAQVREASDVWLNLAHIYVEQISAVQMYENCLRKFY------------------------KHQNTELFKCGKLQECKQTLLKARHVAPSDTVLMFN | |||||||||||||
8 | 2tmaA | 0.18 | 0.06 | 0.34 | 0.53 | HHpred | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLKLDKENALDRAEQAEADKKAAEDR---SKQLEDELVSLQKKLK----GTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAESERGMKV-------IESRAQKEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESAELSEGKCAELEEEIKTVTNNLKSLEAQAKYEEEIK-VLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLK----------------------------------------- | |||||||||||||
9 | 2tmaA | 0.14 | 0.06 | 0.41 | 0.53 | MRFsearch | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADR-KYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTS-------------------------------------- | |||||||||||||
10 | 2tmaA | 0.14 | 0.05 | 0.36 | 1.23 | FFAS-3D | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKL------------------------------------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |