Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | DGQRVAPVGVADRGELILNKDKFSYKNWNSAQLAGKVRVIQHIAGRSSAKEKNANLIEAIKAAGFPHDRYQTTTIVNTDDAIPGTGMFVRSSIESNKKLFPWSQFIVDSNGLVRKAWQLDEKSSAIVVLDKNGRVQWAKDGALTQQEVQQVIDLLHK |
1 | 3lwaA | 0.14 | 0.13 | 0.89 | 1.33 | DEthreader | | DRQQLPDIGGDS-LE--------EGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHE-ELAAPGGTVLGINV--RDY-S-RDIAQDFVTDNG--LD-YPSIYDPPF-TAASLGVPSVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVE |
2 | 6gc1A1 | 0.11 | 0.10 | 0.90 | 2.14 | HHpred | | QDLSVPEFPLEW----------LNTEPISVKDLCGKIVVLDFFTYCCINCIHLLPDLHALE-HTYSDDGLLIIG-VHSAKPNEKVLDNIKSAVLRYNITHP---MVNDADASLWQELEVSC-WPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALK |
3 | 2b5yA | 0.12 | 0.11 | 0.88 | 0.67 | DisCoVER | | LRQPMPELTGE-KAWLNG----E----VTREQIGEKPTLIHFWSISCLCK-EAMPQVNEFRDK--YQDQLNVVAVHMPRSEDDLDPGKIKETAA--EHDI-TQPIFVDSDHALTDAFENE-YVPAYYVFDKTGQLRHFQAGGM-K-MLEKRVNRVL- |
4 | 2yp6A | 0.11 | 0.10 | 0.89 | 0.35 | MRFsearch | | -GKDAPDFTLQSM----------DGKEVKLSDFKGKKVYLKFWASWCGPCKKSMPELMELAAKP--DRDFEILTVIAPGIQGEKTVEQFPQWFQEQG--YKDIPVLYDTKATTFQAYQIRS-IPTEYLIDSQGKIGKIQFGAISNADAEAAFKEMN- |
5 | 2yp6A | 0.12 | 0.11 | 0.90 | 1.76 | SPARKS-K | | VGKDAPDFTLQSM----------DGKEVKLSDFKGKKVYLKFWASWCGPCKKSMPELMELAAK--PDRDFEILTVIAPGIQGEKTVEQFPQWFQEQGYK--DIPVLYDTKATTFQAYQIRS-IPTEYLIDSQGKIGKIQFGAISNADAEAAFKEMN- |
6 | 3sbcA | 0.09 | 0.08 | 0.89 | 0.66 | MAPalign | | VQKQAPTFKKTA---VV----DGVFDEVSLDKYKGKYVVLAFIPAFTFVSPTEIIAFSEAAKK-FEEQGAQVLFA-STD-----SEYSLLAWTGGLGPIN--IPLLADTNHSLSRDYGVLVALRGLFIIDPKGVIRHITINGRNVDEALRLVEAFQ- |
7 | 3sbcA | 0.08 | 0.08 | 0.94 | 0.44 | CEthreader | | VQKQAPTFKKTAVVD-------GVFDEVSLDKYKGKYVVLAFIPAFTFVSPTEIIAFSEAAKK-FEEQGAQVLFAST--DSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVGVALRGLFIIDPKGVIRHITINGRNVDEALRLVEAFQW |
8 | 2hyxA1 | 0.15 | 0.14 | 0.94 | 1.21 | MUSTER | | SCGTAPDL---KGITGWLNTP--GNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQA-YKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYP---IALDNNYATWTNYRNRYWP-AEYLIDATGTVRHIKFGEGDYNVTETLVRQLLN |
9 | 2l5oA | 0.18 | 0.16 | 0.88 | 0.96 | HHsearch | | DSKTAPAFSLPD----------LHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTA-NDYKNKNFQVLA-VAQPI---DPIESVRQYVKDYGLPFT---VMYDADKAVGQAFGTQVY-PTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWR |
10 | 2yp6A | 0.11 | 0.10 | 0.89 | 1.90 | FFAS-3D | | -GKDAPDFTLQS----------MDGKEVKLSDFKGKKVYLKFWASWCGPCKKSMPELMELAAKP--DRDFEILTVIAPGIQGEKTVEQFPQWFQEQG--YKDIPVLYDTKATTFQAYQI-RSIPTEYLIDSQGKIGKIQFGAISNADAEAAFKEMN- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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