>PF09692 (409 residues) SGKNKKPPVTGFEEFYADPPITPDEHEEEEDLYDESRPFADRIQTCIQRYRARRNLDSDR SNILTKYFMLGGVDSSPKSFTGGLDQETLENSTAAEIAAIQATDYVKTGTQNAKYYDGSD NWVVDFEGVAKGFFSYRVPRMFSIDQEREIKLYSQVIRNFLNYVLHHCVCPEYTQDVMAA RKICDLAEKELWAITQLQTKLPGDFNVAASILYGGRYKEYRLHAQAWSLDDPEFQDYTST NPGFTDAEAERKFKTAVAFAGDDALFMKTMEAGVRIVKTTRKFYEVVEIERPSLQTIQEY ASVKNSKGESGYIKALGVVKFKAWEGPGFEPEDFTDDEGAATELKVEEAGVESFWLEDDI LELFFVGLKLELEVQELNMGIKFFDKVIGLHCSFHTYLPNEKMVHWKEP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SGKNKKPPVTGFEEFYADPPITPDEHEEEEDLYDESRPFADRIQTCIQRYRARRNLDSDRSNILTKYFMLGGVDSSPKSFTGGLDQETLENSTAAEIAAIQATDYVKTGTQNAKYYDGSDNWVVDFEGVAKGFFSYRVPRMFSIDQEREIKLYSQVIRNFLNYVLHHCVCPEYTQDVMAARKICDLAEKELWAITQLQTKLPGDFNVAASILYGGRYKEYRLHAQAWSLDDPEFQDYTSTNPGFTDAEAERKFKTAVAFAGDDALFMKTMEAGVRIVKTTRKFYEVVEIERPSLQTIQEYASVKNSKGESGYIKALGVVKFKAWEGPGFEPEDFTDDEGAATELKVEEAGVESFWLEDDILELFFVGLKLELEVQELNMGIKFFDKVIGLHCSFHTYLPNEKMVHWKEP | |||||||||||||||||||
1 | 2pffA1 | 0.05 | 0.04 | 0.79 | 0.72 | DisCoVER | GGGGGGGGGGGGGGGGGGGGGG--GG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGG--GGGGGGGGGGGGG---------------GGGGGGGGGGGGGGGGGGG---GGGG--G--GGGGGGGGG---------GGGGGGGGGGGGGGGGGGGGVT--------------------------FKDKYVLITGAGSIGAEVLQGLLQGGAKVVVTIYAKYGAKGSTLIVVNQGSKQDVEALIEFIYDTEKNGGLGWD----------LDAIIPFAALEHIDSKSEFAHRIMLTNILRMMCVKRPAQVILPMSPNHGTFGGD----GMYSESKLSLETLFNRWWANQLT--V---CGAIITRGIAEGTFSQKEMAFNLLPVMADLNGGLLTSERKS- | |||||||||||||
2 | 4cvuA | 0.04 | 0.03 | 0.70 | 0.67 | DEthreader | VLHAAG----ESN-NGLNDFDLRWIAAWDTYQVPIIRQVRKEQNDGIPPDAWRVRMLFDSVEQFNMLRVWSSGLLWSEFQF----------VVGEITYNVRRLWMGGNEFENLMFLLISYSPCSA--TDFYNYDTVSFDTY--------GFISMPSTWA-ILRNHH-YPAGGLTRNIHNSTLGQVEMTLAVEYYPTPDKTDANFSSWCHATQL-----------------------WQ-APT----------YV-RTSAFWEIWVTSDLVAGEV----------------KGKPKAVLVNHFLPV--WPNQAKVSDPKLHLSY---------------------NK-STKKFTVEATAGVSL-TWLTHPAVLGFFDD-----FTLQQDQVTESL--------------- | |||||||||||||
3 | 6r6tA | 0.09 | 0.08 | 0.93 | 0.64 | CEthreader | ------------------KSVTESFAGMIHGLKVNHLTDGIIRRSKRMILDSLGVGFLGTGTEVFHKVTQYSKIYSSNTSSTVWGRPDFRLPPTYAAFVNGVAVHSMDFDDTWHPATHPSGAVLLAFNVGIEVQGRLMHFSKPKRFHPPSVVGTLGSAAAASKFLGLS-----LTKCREALAIAVSHAGAPIANAATQTKPLHIGNAAKHGMEATFLAMLGLQGNKQILDLGSGFGAFYANYSPEDLPSLDSHIWLLDQQDVADAAAAVRKHLVTPERALFPADHIERIVLRIPDVQYVNRPFPDSEHEARHS--FQYVACASLLDGSITVPSFHSQQ--VNRPQVRELLKKVKLEHPPDNPPSFDTLYCEISITLKD-GTTFTERSDTFYGHWRKPLSQEDLRNKFRA | |||||||||||||
4 | 3nzqA | 0.07 | 0.05 | 0.74 | 0.73 | EigenThreader | RLASQGSGKWQSSGGEKSKFGLALVETLREAHLGSQMANVRESARFYVELHKLGVNIQ-------------CFDVGGGLTRSQSDC---SVNYG--LNEYANNIIWAIGDACEENGLPHPTVITERALQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHIGYSSGI--FSLQERAWAEQLYLSMCHEVQKQL----------------------------------------------DPQNRAHRPIIDELQER---------------MA-------DKMYVN---FSLFQSMAWGI--------DQLFPVLPLVLLDITCDSDGAIDHGIATTMPMPEYDPENPPMLGFFMV------GFGDTEAVDVFVFPDGSVE--VELSDEGDTVADMLQYVQLDPKTL | |||||||||||||
5 | 4rr2D2 | 0.10 | 0.05 | 0.45 | 0.35 | HHpred | -----------YSTQGNVGKISLDQIDLLTKSFPP------CMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTLEQQEFIKKMDPDKFDKGYSYNIRHSFGK-----E-GKRTDYTPF--------SCLKIILSN-PPSQGDYHGCPFRHSDPELLKQKLQSY---KIS---PGGISQ---ILD-----------LVK--GTHYQVACQKYFEMIHNVD--------DC---------GFSLNHP---NQFFCESQR------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 6reyc | 0.09 | 0.05 | 0.55 | 0.52 | MRFsearch | ---------------------NPRRFCLFKGIFRNDDAFLPVLKPHLEHLVASKHWTFEKVEKLWELLCPL-------------LRTALSNITVETYN----------------------DWGACFVDACRLYVLQGGLAQQEWRVPELLHRLLKRIGSVLTYIFMIDISPHVPEFTARILEKLKPLMTQGIKLLKTILKWLDELKRDAKLCLS-----------------------LMSQGLLYPHQVPLVLQVLKQTARNEDAVKDIRWLVISLLEDE--QLEVREMAATDSPMQIHFEQLC--------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 6yvgA | 0.08 | 0.04 | 0.55 | 0.63 | FFAS-3D | ---KGK--------------LMPNSLKDVQKLICDEGITDNVITTLLAMLKATSDNSDELKPFWVNKFNKLRLEKDHIFQPDPQSRADFKQKEISSYYDYLNLSFTTFNC----------------FYAAQEILTFLIGACKNDTKRENIDLLYNFVTSQSTCLLLANAYFYLAGFYLESIECYKECWGQLHLAQLLETDSEREIHNA---YFNKGLATS------------------NAFGLNSISEIKARCLDLASEALPYPARNVME-----------------------ANAVKTFENR---------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 6w2rA | 0.13 | 0.07 | 0.52 | 0.62 | SPARKS-K | -----------------------------GTTEDERRELEKVARKAIEAAREGN--TDEVREQLQRALEIAG------------TKTAVKLALDVALRVAQEAAKRGN------------------KDAIDEAAEVVVRIAEESNNSDALEQALRVLEEIAKAVLKSEK----TEDAKKAVKLVQEAYKAAQRAIEAAKRTGTDVIKLAIKLAKLAARAALEVIKRPKS-----------------EEVNEALKKIVKAIQEVESLREAEESG-------------------DPEKREKARERVREAVERAEEV----------------------------------------------------------------------------------------------- | |||||||||||||
9 | 5luzA | 0.13 | 0.10 | 0.76 | 0.77 | CNFpred | -----------------------TEADKRLSRFDIEMSMRGDIFERIVHLQETCDIKPEARRYLEKSIKRNGLHLPE------QVQNEIKSMKRMSELCIDFNKNLNEDDTFLVFSK-DDKYKITLKPHYFPVMEMAFNTRCKEENTIILQQLLPLR-THADFVLEMNTAKSVTAFLDDLSQKLPLGEAEREFILNLKKK-DGKINAWDLYYYMTQTEELKY--------------------SIDQEFLKEYFPIEVVTEGLLNTYQELL--GLSFEQMTDKSVTLYTVKDK------------------ATGEVLGQFYLDLYPREGKYNH------------------AACFGLQPGCLLP-SRMMAVAALVVNFS-SLLRHDEVRTYFHQFGHVMHQICA------ | |||||||||||||
10 | 5g0iA | 0.05 | 0.03 | 0.64 | 0.67 | DEthreader | ---------G-GL-VYVDAFTRFHCLW-ECMKAYDSV------ACLSVGSVLQLDKVTSQLRNGF-------LAAARYAQKR-R--------------IF--SVLYFSESDSSSVGQGYNINLPYAPCFSILTHMLKGVAQG----------R--LV--LA--L----EGGYNLSTAEGVCASMRSLGDPCP--PIT-GL-VYD--QRMMLHHPELPQRISR--IFSRHEELRLLSR------P----A--RL-ATEEELASSKHISIIKSSLGIACGFCNTAATARYAQSIT--------------------------SVLYISL-----HRYEDGSEDANYDKVGLGRYN------------APELVLVSAG------------YLTHLMSLAA-------LTP--- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |