Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | AVYLLGVRRLRRRGDAWPVGRTAAWLLGCATLLVSTSSGLGRYSPAMFSVHMVNHMSLSMLVPILLVLGGPVTLALRALPPSGRDAPPGPREWLLALTHSRLARVLTNPIVALVLFIGSFYGLYFSGLFDAALSEHWAHLAMNAHFLLAGYVFFWPVIGVDPAPRRLPPLGRLGLLFASVPFHAFFGVILMNMQTVIGAEFYRALDLPWMEDLLADQRLGGGIAWASGEIPVLIVMIALLVQWVRS |
1 | 2vpyC | 0.14 | 0.13 | 0.91 | 1.06 | SPARKS-K | | ----AEFYGLPNAQEFWHTNALHFVLVGLAGGVALLAALLHLKGDAEARRYTLYALMLIALDLFILWAESP-------ARFLSFHPTSPIWWGAWGLGLGFLTGGLLYALAWALLVFSLVALSYPGLALAVNLNRPLWNGLMAGLFPLTALVLALGLAALLKSPWALFPLRVLAGASLLLALLY-----PLTLPPEARGHLLEEAGFWY-----GLFLLLGLGTFRLAPWAGLLAAAGLRALLVLA |
2 | 3rkoB | 0.09 | 0.09 | 0.96 | 1.31 | CNFpred | | LIHMYASWYMRGE---EGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAP-MLMWATLMLLGGAVGKSAQLLQTWLADAMAPTPVSALIHAATMVTAGVYLIARTHGLFLM------TPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILA |
3 | 4ldsA1 | 0.06 | 0.03 | 0.54 | 0.59 | DisCoVER | | -------------------------------------IFILGALGGLGYDNGVISGASMLIGAIVGAGSS--GPLAD--------------------------KLGRRVMLIAIVFIIGAL-I--------LAAST-NLALLIIGRLIIGLAVGGS-MSTVPVYLSE-MA-PTEYRG----------------------SLG-SLNQLMI-----TI-GILAAYLVNY--NEEAARQVMKITY--- |
4 | 6u8yH | 0.09 | 0.07 | 0.78 | 0.83 | DEthreader | | A-LIAIIIYAGGWKPP---YIGHFAALFILVIAVVSFLMALFN-KA----------------A--GM-IA-T-GDIFNL-VF-----------FLVGVALGLIIFGLAVEAELFPLNAWAPDAY-Q-A--APH--P--I-TVMFSAFVVKAGLYAMARLYLFKVGWSSTKLLIAMATLTVVFAELS-AL--RQ-KNVKIGYVGITLLRMPLTS-LSLTIGGIATVGNVFWSKLRIILAAAHEGN-- |
5 | 3m71A1 | 0.09 | 0.06 | 0.71 | 0.49 | CEthreader | | ----------------PFPLPTGYFGIPLGLAALSL--AWFHLENLFPAARMVSDVLGIVASAVWILFILMYAYKLRYY------------FEEVRAEYHSPVRFSFIALIPITTMLVGDILY------------RWNPLIAEVLIWIGTIGQLLFSTLRGVFEQKSTHPSFYLPAVAANFTSASSLALL-----------------------------GYHDLGYLFFGAGMIAWIIFEPVLLQH |
6 | 5ztyA | 0.11 | 0.10 | 0.93 | 0.75 | EigenThreader | | DYMILSGPQKTAVAVLCTLLGLLSALENVAVLYLILSSHQLRRK-------PSYLFIGSLALADFLASVVFACSFVNFH---VFHGVDSKAVFLLKIGSVTMTFTAS--VGSLLLAAIDRYLCLRYPPSYKALLTRGRALVL----LGIMWVLSALVSYLPLMGWTCWLLFIAFLFSGIIYTYGHVLWKAHQHVASNIFEMLRIDEGLDAYARMRLDVELAKTLGLVLAVLLICWFPVLALMAHSL |
7 | 4cadC | 0.16 | 0.11 | 0.71 | 0.22 | HHpred | | ----AKKKDFINRNLKLINLKTVVFLLMPAVILLSLSIPFSQFQFGGDF------VP--V-LFLLLLAATFEELGWRG--------------YAF----DSL-QSRYSLFKASILFGIFWSLWHFPLIFQYENQSIWYGLNFFLSILPMGIIITWMCLKNR-----KS-------IILAIIFHFLINLNQELLA----------------ITQD-TKIIETGV--------LFLVAAAIILY-DK- |
8 | 1ocrN | 0.13 | 0.11 | 0.87 | 0.32 | MRFsearch | | ------------------GASVDLTIFSLHLAGVSSILGAINFITPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQ----HLFWFFGHPEVYILILPGFGMISHIVTYYSGKPFGYMGMVWAMMSIGFLGFIVWAHHMFTV----GMDVDTRAYFTSATMIIAIPTGVKV-------FSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTAVFAIMGGFVHWFPL |
9 | 4ikvA2 | 0.10 | 0.09 | 0.86 | 0.80 | FFAS-3D | | ------------------LVGILGIIIPIIYFVVMYRSPKTTAEER---SRVIAYIPLFVASAMFWAISTILANYADKRTQLDVAGIHLSPAWFQSL--NPLFIIILAPVFAWMWVK-----------LGKRQPTIPQKFALGLLFAGLSFIVILVPGHLSGGGLVHPIWLVLSYFIVVLGELCLSPVGLSATTKLAPAAFSAQTMSLWFLSNAAAQAINAQLGTIGGAALVLGLILLAIAPRIGR |
10 | 5oqtA | 0.12 | 0.11 | 0.95 | 1.05 | SPARKS-K | | GIFVLTGVAAAEHA------GPALVLSFILSGLACVFAALCYAEFASTAYTYSYATLIAWILGWDLILEYGVASSAVAVSAYDPAKGTFIDLPAIIIVLFITFLLNLNAVIVAIKVAVVLLFLAVGVWYVKPENWGVATGAATVFFAYIGFDAVSTAAEEVRNPQRDMPIGIIVSLLVCTLLYIAVSLVLTGIVKNPVAFALNYIHQ-------DWVAGFISLGAIAGITTVLLVMMYGQTRLFYA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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