>PF09665 (433 residues) DYTEMIVNHPSYKGLLYERKADGRVKWGAAGKSDKGQLRRQWWDEQCTTAGIKVEAGCYA KIAVAIHPTKKHVCQICGKTLSVEYVYPDKRTLTALNQKLSADIKPYTLTIFEIIDKYGV SSSAIENIKSAFKIEGCTATKAQLGDYIFKNCQTHLSPGVMSNSPDRFDGFHSDGSCCRG TSDKGRHKENLQRYSQDRRVYENWADGNWKMADRLMAEFAKHGVSADHIGPISLGFCHRA KFQPMTKSENSAKNNRMSFCDVQTLLADEAKGEQVISWHSKYIWDTFKDRITNDTEAVKV SAIMRNNLHQILLIFSIISENGYNDFLTEFLNPQHSFHDYSFKGFDPQTGEYKEVKTKNL TGKNQQNNVDRYLRIAFESLEDYKTKDNRKQYGWDNAEIDKNINQTLQYLSEGNKEEATK QLKVTFQKLAEIA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | DYTEMIVNHPSYKGLLYERKADGRVKWGAAGKSDKGQLRRQWWDEQCTTAGIKVEAGCYAKIAVAIHPTKKHVCQICGKTLSVEYVYPDKRTLTALNQKLSADIKPYTLTIFEIIDKYGVSSSAIENIKSAFKIEGCTATKAQLGDYIFKNCQTHLSPGVMSNSPDRFDGFHSDGSCCRGTSDKGRHKENLQRYSQDRRVYENWADGNWKMADRLMAEFAKHGVSADHIGPISLGFCHRAKFQPMTKSENSAKNNRMSFCDVQTLLADEAKGEQVISWHSKYIWDTFKDRITNDTEAVKVSAIMRNNLHQILLIFSIISENGYNDFLTEFLNPQHSFHDYSFKGFDPQTGEYKEVKTKNLTGKNQQNNVDRYLRIAFESLEDYKTKDNRKQYGWDNAEIDKNINQTLQYLSEGNKEEATKQLKVTFQKLAEIA | |||||||||||||||||||
1 | 3u44B | 0.07 | 0.06 | 0.85 | 0.55 | DisCoVER | GAEFLVGRSGSGKTIIILRRPFGKPIIFLVPDMIRAQVFSFSMLTEFKRYCLEPAHIYVDGQRHTLALT--VMQAANRRAEKDVAILAR-QPEDYVKEVFADYEIPYFIDGKASMLNVLWRYEAVFRCVKQQAWDAV-GAESLTFSLILDQVFVGNTSCTFVLLSSSPSDRLYVSYPIADERLLTN---YGERIQGSVSRMFNACPFSHFASHAS--GFVGLELMELVGRIDRVDKAGLLLRIVADLAEVYGLALQMLTYLDLSITHSA--RATPAGVLYF-HIHDPM-PLGLDEIEQEIFKKFKMKG--LL------------------------LGDQEVVRLMDTTLIINAGLLRVGEQEAGEQITDGR--VS--IE-PY--------------KM--KNKTPCTYCQFDESLEENEYR-PL--KAEKD- | |||||||||||||
2 | 2fahA | 0.07 | 0.04 | 0.64 | 0.67 | DEthreader | --------LPAAARDFVEEAVR-LCR-P---R--EVLLC--D--GSEEEG-K-ELLRGLQDDGVLWLARTD----------DVARVES---TVL-VTPEQSD-A---------V---PP-SGGPP-QLGNW----MSPNAFQAAVQERFPCLVGVQ---SPYVVLSMRI--MTR-VGPAVLQRLFV-----------GKK-ALAEHMLIMAAAFKTLAMMRIHCVGDRGFFGVAPGTSSRTNPNAMA-TIARNTIFVGLRGGVYWDGLD-----------------SW-LGKPWDEPCAHPNTAAAEHKGGRLMHDPFA------NAGRYLEHWLTGLPRLFVWPGFGHNARVLWIFRI--------------------------------------------EEECRQLREYYGENFG-------------- | |||||||||||||
3 | 4ui9O | 0.09 | 0.09 | 0.99 | 0.61 | CEthreader | DRLILTGAESKSNGEEGYGRSLRYAALNLAAHYQQAELALQEAIRIAQESNDHVCLQHCLSWLYVLGQKRSDSYVLLEHSVKKAVHFGLPYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWKHSLSELIDISIAQKTAIWRLYGRSTQMLLSMNSLEQQNNTESFAVALCHLAELHAEQGCFAAASEVL---KHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNSIEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIALPMLLQALALSKEYRLQYLASETVL-NLAFAQLILGIPEQALSLLHMAIEPILADGAILDKGRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARLYHTLG | |||||||||||||
4 | 4kvmA | 0.08 | 0.08 | 0.90 | 0.77 | EigenThreader | FRTALKCYETKQYKKGLKAIEPLLIKGILLHSLGNTKEGYDNVRLGLR---NDVGSGVCWHIFGLISRADKD---------------YVQAAKCYINAHKLEKNNSSLLRDLALLQSQLRQYKALADTRNALLQDNPGVRANWSALAVAQFLRGEINQGVPVDTQEESEAMLFMNLVILKKDGVEDAYKHLLSIEKKVRAEYELYLSKMEEAKSTIYLLLDRNHQYYYNLQRAYGYEDASGKVSECPTRLPLEKLEFLTHVDLYLRKKLKRGIPS-----VFVDVKSLYKDTKKCKVVEDLVSKYASSELFMTKARISKHKGELQTAMEIMDHARKLD--------------------LQDRFINGKCAKYMLRNDENELAAKTVSLFTRNEAVGGAVGDLADMDGKSFARQKKFALALKRFSTVFKIFDTWA | |||||||||||||
5 | 4ogcA3 | 0.12 | 0.03 | 0.29 | 0.61 | HHpred | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RRRYNDNQEAK-KIQRDYGKEGYRGDIVRLDALELQGCATCQLDHIVPQAGPGSNRRNLVAVCERCNRSKSNTPF-AV---WAQK--CGIPHVG--VKEAIGRVRGWRKQTTSSEDLTRLKKE-------VIARLRRTQE-------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 6tc0C3 | 0.08 | 0.04 | 0.48 | 0.37 | MRFsearch | --------------------------------KELKDFLPSLWASIRREVFQTASERVEAEGL---------------------------AALHSLTACLSCSVLR--ADAEDLLGSF--LSNILQDCRHHLCEPDMKL---------------------------------------------------------------------VWPSAKLLQAAAGA-----------------------------------SARACEHLTSN----------VLPLLLEQFHKHNQRRTILEMILGFLKLFKDQLCSLVFMALT-------------------------------------------DPSTQLQLVGIRTLTVLGAQP-------GLLSAEDLELAVGHLYRLTFLEDSQSCRVAALEASGTLATLY | |||||||||||||
7 | 5o9zG | 0.10 | 0.09 | 0.93 | 0.77 | FFAS-3D | -LRKALEHVPNSVRLWKAAVELEE------------PEDARIMLSRAVECCPTARLETYENARKVLIPTDRHIWITAAKLEE--ANGNTQMVEKIIDRAITSLRANGVEIDAEECDRAGSVATCQAVMRAVIGIEDRKHTWMEDADSCVAHNALECARAALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVKAEVLWLMGAKGDVPAARSILALAFQANPNSEEI------WLAAVKLESENDEYERARRVQDNIRAAQDLCELRHYEDFPKLWMMKGQIEEQKEMM--EKAREAYNQGLKHSTPLWLLLSRLEEKIGQLTRARAILEKSRL--------KNPKNPGLWRLEYRAGLKNIANTLMAKALQILWSEAIFLEARPQRDALKKCEHDPHVLLAVAKLFWSQRKITKAREWFHRTVKFFYKF- | |||||||||||||
8 | 5h7cA | 0.09 | 0.07 | 0.77 | 0.63 | SPARKS-K | NAFYEILHLPNLNE----------------------EQRNAFIQSLKDNLLAEAKSLNVNQAVKQLAEATDK-----------------EEVIEIVKELAEST---DSELVNEIVKQLAEVAKIVKILAELAKSTDVNEIVKQLAEVAKEATDKELVIYIVKILAEVNEIVKQLEEVAKEATDKELVEHIEKILEELEQQSAFYEILNEEQRNAFIQSLKDD---------------------PSQSANLLAEAKSLNNQAVKQLAEKAKEDKEEVIEIVKELAELAKQSTDSNEIVKQLAEVAKELVIYIVKILAELAKQSDSELVNEIVKQEVAKEA------------------------TDKELVIYIVKILAELAKQS-----------TDSELVNEIVKQLEEVAKEADKELVEHIEKILEELKKQS | |||||||||||||
9 | 4hatC | 0.10 | 0.08 | 0.79 | 0.85 | CNFpred | -----------------------------------WNFLRTVILKLFEFMHETH-EGVQDMACDTFIK----IVQKCKYHFVIQQEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIII-VAERNRLLSDLMQLP-NMAWDTIVEQSTAN--PTLLLDSTVKIIANIIKTNVAVCTSMGA-----DFYPQLGHIYNMLQLYRAVSSMI-TPKVRGLRTIKKE------ILKLVETYISKANLDDVVKV--------LVEPLLNAVLEDYMNNVDARDAEVLNCMTTVVEKVG--MIPQGVILILQSVFECTLDMINKDFT-EYPEHRVEFYKLLKVINEKSFAAFL----------------ELPPAAFKLFVDAICWAFKH----NNRDV----EVNGLQIALDLVKNIERMNVPFANEFHKNYFFIFVSET | |||||||||||||
10 | 2vdcA | 0.06 | 0.04 | 0.66 | 0.67 | DEthreader | W-ML-PQALTSSHKALIQYC--SVMEPWDGPAALGMDRNGLGPG---------PIDSLRERRMSLKTESPVLTGHTHLLNVRTEGLDT-------------------AYLAQEAIA-E-----RH-RR-GLFGSMPL--E--KGMANYKK--AI-DDGLLKIMSGISVISSYRGGGNFEAVFPAMVSRIS-----------------------------HGWE-------------RFITPGMSMGALS-------DSGEGGEDPARFRPNNSAIKQVAVTAEYLNQC--TEMIARLRHSTL-SP--HHDIYSIEDLAQ----AGVAKANADLHRVRLAEEFGIGTASLIVLFLASLNIGRQVDPN-------------------------------AYNARNTQRA------------IGTRLSSMGAFVLS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |