Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | VLTLRQIRDSMAAFDTADTGRYIVSVCENAAVVAAAADRLGPDCPPLVCTAGQPSAAVIGLLDLLTAAGGRLRYHGDFDWPGLTIAGGLYRRYRWQPWRFTAADYASCEPPVATAPLTGIPVQAEWDTELTVAMSRRGIQIEEELTLPQLLADL |
1 | 1d3yB | 0.15 | 0.15 | 0.97 | 1.33 | DEthreader | | SNIPNDVTKLNL--ET--DA-DFILAIETSGMFARLNERFWDHNCILVSLKGVPARATRRFIKRLHEHDLPVLVFTDGDPYGYLIYRTLKVSIAARLIGVTPQDIIYDLPTHPLKEDIKIGLVSFEWQKALKQMLDMGVRAEQQSLVVYLPEKI |
2 | 2q2eA2 | 0.12 | 0.12 | 0.97 | 1.33 | DEthreader | | ATMGGYQIP-IEFQKH-DA--SMIIAIETGGMYARLMNGFDEANAILVHLKGQPARSTRRIIKRMNELGIPVAVFTDGDPWSYRIYASVAYATAAKFLGLQPSDIVYELSTDKLTEDVSLSEESDYWKEQIQLQLDIGKKAEQQAFVTYLPNRL |
3 | 2zbkA | 0.17 | 0.16 | 0.94 | 1.59 | HHpred | | --------HGAYAIEPTDVDAEFVLVVEKDAVFQQLHRAGFQYKSILITSAGQPDRATRRFVRRLNELKLPVYILTDADPYGWYIFSVFRIGTPAKFLGVSMGDIFGNSEIIDIKEIKNYEWKTKAWQEEINTFLQRKAKLEIEAMASKGLAQ- |
4 | 2q2eA2 | 0.12 | 0.12 | 0.98 | 0.90 | DisCoVER | | DGTMFQIPFNVENIEFQKHDASMIIAIETGGMYARLMENGFDENAILVHLKGQPARSTRRIIKRMNELGIPVAVFTDGDPWSYRIYASVAYATAAKFLGLQP--SDILSTDKLDVALRSELFESDYWKEQIQLQLDIGKKAEQQAFADFVTYL- |
5 | 2q2eA2 | 0.15 | 0.13 | 0.85 | 0.73 | MRFsearch | | ---------------------SMIIAIETGGMYARLMENGFDENAILVHLKGQPARSTRRIIKRMNEEGIPVAVFTDGDPWSYRIYASVAYGAAAKFLGLQPSDIVEY--ELSTDKLTEQDVSSDYWKEQIQLQLDIGKKAEQQAFAEVYLPNR |
6 | 1d3yB | 0.17 | 0.17 | 0.99 | 0.87 | SPARKS-K | | DCTKLGTGAYNIPNDVTKTDADFILAIETSGMFARLNAEWDKHNCILVSLKGVPARATRRFIKRLHEEHLPVLVFTDGDPYGYLIYRTLKVGKAARLIGVTPQDIIDYDLPT--HPLKEIKRSFPEWQKALKQMLDMGVRAEQQSLVNTYLPEK |
7 | 1d3yB | 0.14 | 0.14 | 1.00 | 0.87 | MAPalign | | EEDGSSVIPNDVTKLNLETDADFILAIETSGMFARLNAFWDKHNCILVSLKGVPARATRRFIKRLHEEHLPVLVFTDGDPYGYLIYRTLKVSIAARLIGVTPQDIIDYDLPTHPLRIKDGLVRSPEWQKALKQMLDMGVRAEQQSLVTYLPEKI |
8 | 1d3yB | 0.15 | 0.15 | 1.00 | 0.89 | CEthreader | | LGTGAYNIPNDVTKLNLETDADFILAIETSGMFARLNAFWDKHNCILVSLKGVPARATRRFIKRLHEEHLPVLVFTDGDPYGYLIYRTLKVGKAARLIGVTPQDIIDYDLPTHPLKEQDIVRSFPEWQKALKQMLDMGVRAEQQSLAKYGLKYV |
9 | 2q2eA2 | 0.12 | 0.12 | 0.96 | 0.61 | MUSTER | | QIP-----FNVENIEFQKHDASMIIAIETGGMYARLMENDEAYNAILVHLKGQPARSTRRIIKRMNELGIPVAVFTDGDPWSYRIYASVAYG-AAKFLGLQPSDIVEYELSTDKSELSDPRFESDYWKEQIQLQLDIGKKAEQQAFAGKGLDFV |
10 | 2q2eA2 | 0.12 | 0.12 | 1.00 | 3.25 | HHsearch | | PIEITHCQKGGYQIPFQKHDASMIIAIETGGMYARLMENGFAYNAILVHLKGQPARSTRRIIKRMNELGIPVAVFTDGDPWSYRIYASVAYGAPAKFLGLQPSDIVEYELSDDVSALRSDPFESDYWKEQIQLQLDIGKKAEQQAFAGKGLDVY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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