>PF09608 (223 residues) LVADLSNHLIAINTGFVGTEVVLFGATDGPGDVAVVVQGPPTEVMVRRKSRVAGIWINTA SMEFQQAPSFYSVATNRPLDQIIGDAVLARHEIGLAHLRLPPLTPARASPERVREFREAL IRNKQEEGLYGKTHGQVAFLGERLFRTNVYFPANVPTGAYTVSVFLIRDGDVVSAQTTPL AVSKVGFSAEIFEFAMRQSTFYGISAIIFAVAAGWLAGAIFRK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | LVADLSNHLIAINTGFVGTEVVLFGATDGPGDVAVVVQGPPTEVMVRRKSRVAGIWINTASMEFQQAPSFYSVATNRPLDQIIGDAVLARHEIGLAHLRLPPLTPARASPERVREFREALIRNKQEEGLYGKTHGQVAFLGERLFRTNVYFPANVPTGAYTVSVFLIRDGDVVSAQTTPLAVSKVGFSAEIFEFAMRQSTFYGISAIIFAVAAGWLAGAIFRK | |||||||||||||||||||
1 | 1pu5A | 0.15 | 0.08 | 0.55 | 0.83 | DisCoVER | AVIRLTLDPIVV---PGNVTLSVVGSTSLPLKVDLVLEKE-----------------------VAGLWIKIPCSCTF----E----------HFCDVLDIP-PCPEPLRTYGL--PC---H--------CPF--------KEGTYSLPKEFVVPDTTGNYRIESVLSSSGKRLGCIKIAASLKG--------------------------------------- | |||||||||||||
2 | 3weuA | 0.08 | 0.06 | 0.70 | 0.83 | DEthreader | LSVHPSIGVARL-GNAIRRQGQVFKELSPNVNIEWTVHLANKK-------------------SRQSIIDLPRSVSGVMA--------------NIPE-TY----------------L--HPSYPSGFESLG-TL-RTDSQ---GRLIVLGGYGFDDISDGSVTCVVTYSDDSSETSTAWMVVEWQDFFNCTIQT-YYSY-PSPWDVLTFIRDRNQ-TE----- | |||||||||||||
3 | 4zwjA3 | 0.14 | 0.09 | 0.60 | 0.82 | CEthreader | VTIYLGKRDYVDHVSQVEPVDGVVLVDPEGKKVYVTLTCAFRYGQEDID---------VMGLTFRRDLYFSRVQVYPP------------------------VGAMSVLTQLQESLLKKL--------------------GDNTYPFLLTFPDYLPCSDFEVKAFASDITDIPKKSSVRLLIRKVQ------------------------------------- | |||||||||||||
4 | 5xcsB | 0.05 | 0.03 | 0.64 | 0.65 | EigenThreader | IELTQSPSSLTVTAGEKV-TMSCKSSQSLQKNLTWYQQKPG--------------------------QPPKLLIYWAST--RES-------GVPD---------------------------------RFTGS----GSG---RDFTLTISSVQAEDLAVYYCQNDN--SH--PLTFGGTKLELKTVEDLQKRLLALDPMCEQEIEEIRQKYQSKRQPILDAI | |||||||||||||
5 | 5l7rA | 0.12 | 0.09 | 0.79 | 0.43 | HHpred | -----TDIRYKKEEPAAQKSMNLTAWKGEKISAQLVVWTPKNDLTFMVSDLTSGATISKENIRTGFVR---YVITDELNKDG-------LGACGYRSADFDSTLV--ADVI------------------DHI-TPTLTLPATQGGWISVNIPQGTKAGKYTGTVTVKADGITLSELKLNLQVKNRTLPPPPYAVSRYYNVEFDLMRPLMKLY----------- | |||||||||||||
6 | 2ag2A | 0.18 | 0.10 | 0.56 | 0.55 | MRFsearch | ------IRSLTLEPIVVPGNVTLSVVGS----TSVPLS-SPLKVDLVLEKEVAGLWIKIPCTDYI-------------------------------------------GSCTFEHFCDVLDMLIPTEGTYSLPKSEFVV-------PDLELPSWLTTGNYRIESVLSSSGKRLGCIKIAASLKGI-------------------------------------- | |||||||||||||
7 | 1pu5A | 0.15 | 0.09 | 0.65 | 0.53 | FFAS-3D | -SLTLEPDPIVV-----PGNVTLSVVGSTSVPL-----SSPLKVDLVLEKEVAGLWIKIPCTDYIGSCTF------EHFCDVLDMLIPTGEPCPEPLRTYGLPCHCPFK-----------------EGTYSLPKSEFVVPDLE-------LPSWLTTGNYRIESVLSSSGKRLGCIKIAASLKGI-------------------------------------- | |||||||||||||
8 | 4dvyP2 | 0.11 | 0.08 | 0.70 | 0.67 | SPARKS-K | ----ALSSVLMGSHNGIEKVSLLYAGFGDKHDWNATVGYKNVATLINHMKNGSGLVIAGGEKGINN-PSFYL---YKEDQALSQEEIRNKVDFMEFLAQNNTKLD-NLSEKEKEKFQNEIEDFQKDSKAYLDGNDRIAFVSKK-------------DTKHSALITEFNNGDL-SYTLKDY------------------------------------------- | |||||||||||||
9 | 5l7rA | 0.10 | 0.08 | 0.78 | 0.78 | CNFpred | -------------------SMNLTAWKGEKISAQLVVWTVLNDLTFMVSDLTSGATISKENIRTG-FVRYVITDELNKDGLGACGYRNSAD-------------------FDSTLVADVIDHIT----------PTLTLPSTQGGWISVNIPQGTKAGKYTGTVTVKADGITLSELKLNLQVKNRTL-QNPYAVSRYYNVHFDLMRPLMKLYADAGGKVITAS | |||||||||||||
10 | 3weuA | 0.10 | 0.07 | 0.74 | 0.83 | DEthreader | LSVHPSIGVARLGNKIRRQGQVFKVELSNVKNIEWTVHLANKKAA---------------SEQSLIIDLGPRSVSGVMA--------------NIPETYLHP-------------SY-SG----HFESLGT-L-RTDSQ-----GRLIVLGGYGDDISDGSVTCVVTYSDDSSETSTAWMVVGSDFAQDFFNCTIQTVVPYW--ARGINSYSQFFINANKE-S | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |