>PF09599 (351 residues) SDLGLSPTLSAPAPGVLTQTPGTITSFLKASIQNTDMNQDLNALANNVTTKANEVVQTQL REQQAEVGKFFDISGMSSSAVALLAAANTLMLTLNQADSKLSGKLSLVSFDAAKTTASSM MREGMNALSGSISQSALQLGITGVGAKLEYKGLQNERGALKHNAAKIDKLTTESHSIKNV LNGQNSVKLGAEGVDSLKSLNMKKPGTDATKNLNDATLKSNAGTSATESLGIKDSNKQIS PEHQAILSKRLESVESDIRLEQNTMDMTRIDARKMQMTGDLIMKNSVTVGGIAGASGQYA ATQERSEQQISQVNNRVASTASDEARESSRKSTSLIQEMLKTMESINQSKA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SDLGLSPTLSAPAPGVLTQTPGTITSFLKASIQNTDMNQDLNALANNVTTKANEVVQTQLREQQAEVGKFFDISGMSSSAVALLAAANTLMLTLNQADSKLSGKLSLVSFDAAKTTASSMMREGMNALSGSISQSALQLGITGVGAKLEYKGLQNERGALKHNAAKIDKLTTESHSIKNVLNGQNSVKLGAEGVDSLKSLNMKKPGTDATKNLNDATLKSNAGTSATESLGIKDSNKQISPEHQAILSKRLESVESDIRLEQNTMDMTRIDARKMQMTGDLIMKNSVTVGGIAGASGQYAATQERSEQQISQVNNRVASTASDEARESSRKSTSLIQEMLKTMESINQSKA | |||||||||||||||||||
1 | 2ch7A | 0.07 | 0.06 | 0.79 | 1.10 | DisCoVER | ----------------------------------------------------QTETFSVA-----------------ESIEEISKANEEITNQLSKEMDNISTRIESISVQETTAGSEEISSATKNIADSAQQAASFADQSTQLAKEAGDALKKVIEVTRM-ISNSAKDVERVVESFQKGAEEITSFVETINAIAEQTNLLALNAAIEAA--RAGEAGRGFAVVADIRKAESQQASENVRRVVNEIRSIAE-DAGKVSSEITARVEETKLAD-EADEKLNSIVGAVERINEMLNIAAAIEEQTAAVDEITTAMTENAAEEITNSVKEVNARLQESTEEVTSRVQTIREVL- | |||||||||||||
2 | 2ch7A | 0.08 | 0.06 | 0.79 | 1.07 | EigenThreader | -----------------------------------------------------------------------GSHMKDVQTETFSVAESIEEISKANEEITNQLLGISKEMDNISTRIESISASVQETTAGSEEISSATKNIADSAQQAASFADQSTQLAKEAGDALKKVIEVTRMISNSAKDVERVVESFQKGAEQTNLLALNAAIEAARAGEAGRGFAVVADEIRKLAEESQQASAEDAGKVSSEITARVEEGTKLADEADEKLNSIVGAVERINEMLQNIAAAIEEQTAAVDEITTAMTENAKNAEEITNSVKEVNARLQEISASTEEVTSRVQTIRENVQIVARYK-- | |||||||||||||
3 | 2tmaA | 0.08 | 0.06 | 0.77 | 1.49 | FFAS-3D | ----MD-AIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSE--------ALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEEL--DRAQERLATALQKLE-EAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEV-----------------------------------------------------------ARKLVIIESDLERAEERAELSEGKCAELEEEIKTVT---NNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRA-EFAERSVTKLEKSIDDLEDELYAQKLKYKAIS- | |||||||||||||
4 | 6r9tA | 0.08 | 0.08 | 1.00 | 1.05 | SPARKS-K | LIQTARALAVNPRAGHSRTVSDSIKKLITSMRDKAPGQLECETAIAALNSCLRDLDQASLAAVSLAPREGISQEALHTQMLTAVQEISHLIEPLANAARAQLGHKVSQMAQYFEPLTLAAVGAASHPQQMALLDQTKTLAESALQLLYTAKEAGGNPKQAAHTQEALEEAVQMMTEAVEDLTTTLNEAASAAGVVGNQLDEGPMGEPEGSFVDYQTTMVRTAKAIAVTVQEMVTKSNTSPEELGPLANQLTSDYGRLASEAAVAAENEEIGSHIKHRVQELGHGCAALVTKAGALQCYTKKELIECARRVSEKVSHVLAALQAGNRQACITAASAVSGIIADLDTTIMFAT | |||||||||||||
5 | 6w98A2 | 0.09 | 0.05 | 0.64 | 0.67 | DEthreader | WL-A---SLTFQSQIPLDLAPAYGYLFPHGAF-SL---L-W-ALLIVAGFW-VA-AL----LT------------TLGAI-SSETLPMM-LAPWVLLSAWPCLALASTWWIVALLIFGKISPKFLDF-IE--S----EV--GTVTQSAMVIATTMLAAAGMAGLAMMRGRLVAVLLIGLVLL--------------------------------------------------------R-N-VHK-LEPLIRLPLILGLAHALSFAIVLLVALAASTSLAW---L-------FARDDSIPLTPPNGLNWYRAGLFGGLALLPILACLALLP-------------------- | |||||||||||||
6 | 2ch7A | 0.07 | 0.06 | 0.80 | 0.85 | CEthreader | -----------------------------------------------------------------------GSHMKDVQTETFSVAESIEEISKANEEITNQLLGISKEMDNISTRIESISASVQETTAGSEEISSATKNIADSAQQAASFADQSTQLAKEAGDALKKVIEVTRMISNSAKDVTSFVETINAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEIRKLAEESQQASENVAGKVSSEITARVEEGTKLADEADEKLNSIVGAVERINEMLQNIAAAIEEQTAAVDEITTAMTENAKNAEEITNSVKEVNARLQEISASTEEVTSRVQTIRENVQMLKEIVAR | |||||||||||||
7 | 2w6dA | 0.07 | 0.06 | 0.90 | 1.05 | EigenThreader | LSLGYVNNCHSQPCTLGERRYLENYIQVRESLPDDVEELQASENRLRQVFNANLAEYCIQALRRRLKNPQADLDGTGFPKFMDSLNTFLTRE-----------RAIAELRQVRTLARLACNHTREAVARRIPLLEQELKKRIDSVEPEFNKLTGIRDEFQKEIINTRDTQARTISESFRSYVLNLGNTFENDFLRYQPELWAKWAMGLLSLSKGNLAGFALAGAGFDWGVGFLQADQAELVKHLPQVAHEQSVYNAVKECFDSYEREVSKRINDDIVSRKSELDNLVKQKQTESEFNRLKNLQEDVIAQLQKIEAAYSNLLAYYSHH------------------------ | |||||||||||||
8 | 7jv4A | 0.13 | 0.10 | 0.72 | 0.30 | HHpred | -----ILPVSMTKTSVDTMYCGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVPIKDFGGFNFSQILPFIEDLLFNKVT-----------FNGLTVLP----------PLLDEMIAQYTSALLAGTITSGWTFAGMQMAFNGIGVTQNVLYENQKLANQFNSAIGKIQDSLSSTA---------SALGK--L-----------QDVVNQ---------------NAQAL-NTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQ---------------------------------- | |||||||||||||
9 | 6bfiA | 0.13 | 0.11 | 0.79 | 0.63 | MRFsearch | -------------EEASAASLAHMFHQAQDALASGDISRSTLDAVRKCISEGLDQILKELEELQAKG------LGDSRQARALAHAAAVKLQELEQEIRKALAERVATDFVNVGGPIKALEDAALAQKAKEFEAHTARLADTAELVASSGGCSDAVAAELRKEAAKLRDISTAVVPAARVVLEN-----------------------------------------------------PGNQAAKDYLRTVKEKWLEAAEVSEARIQADVKEAKRIALAEEDSMKLIAKASSVARQANRVIQVAKVEVAKLSSASESLAKSISPMVIEIQRKFCSSADKVVEGVAAVRSVI- | |||||||||||||
10 | 5xg2A | 0.13 | 0.09 | 0.66 | 1.31 | FFAS-3D | -------------------TKGAIVRWGKRK---EKLIEEIRAREEERNALVVRLGEIDRT----------------------FAVAREEFDTVVKELEEARKSLYEGEARIKRAEEEKERLKA------EILTGEARL----PGLRERAENLRRLVEEKRAEISELERRLSSITSQSFEL-----------------------------------------------------------RIKLSDLEKELELARKDLEKVLAEERAVREEIEVAK---RRINELDTLIERERGELAKLRGRIERLERKRDKLKKALENPEARELTEKIRAVEKEIAALREELSRVEGK-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |