>PF09590 (591 residues) FAANRQWIGPEEAEELLDFDIATQMSEEGPLNPGVNPFRVPGITEKEKQNYCNILQPKLQ DLRDEIQEVKLEEGNAGKFRRTRFLRYSDEHVLSLVHAFIGYCIYLGNRNKLGSLRHDID IEAPQEEYYNNREKGTTDNIKYGRRCCLGTVTLYLILFIGVIVYSQTAGAQVVWRLPPLV VPVEESEIIFWDCWAPDEPACQDFLGAMIHLKAKTNISIREGPTLGNWAREIWATLFKKA TRQCRRGRIWKRWNETITGPSGCANNTCYNVSVIVPDYQCYLDRVDTWLQGKINISLCLT GGKMLYNKVTKQLSYCTDPLQIPLINYTFGPNQTCMWNTSQIQDPEIPKCGWWNQMAYYN RCKWEEAKVKFHCQRTQSQPGSWRRAISSWKQRNRWEWRPDLESEKVKISLQCNSKKNLT FAMRSSGDYGEVTGAWIEFGCHRNKSKHHSEARFRIRCRWNVGSNTSLIDTCGNTQDVSG ANPVDCTMYSNKMYNCSLQNGFTMKVDDLIVHFSMTKAVKMYNIAGNWSCTSDLPSSWGY MNCNCTNSSSSYSGTKMACPSNRGILRNWYNPVAGLRQSLEQYQVVKQPDY |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | FAANRQWIGPEEAEELLDFDIATQMSEEGPLNPGVNPFRVPGITEKEKQNYCNILQPKLQDLRDEIQEVKLEEGNAGKFRRTRFLRYSDEHVLSLVHAFIGYCIYLGNRNKLGSLRHDIDIEAPQEEYYNNREKGTTDNIKYGRRCCLGTVTLYLILFIGVIVYSQTAGAQVVWRLPPLVVPVEESEIIFWDCWAPDEPACQDFLGAMIHLKAKTNISIREGPTLGNWAREIWATLFKKATRQCRRGRIWKRWNETITGPSGCANNTCYNVSVIVPDYQCYLDRVDTWLQGKINISLCLTGGKMLYNKVTKQLSYCTDPLQIPLINYTFGPNQTCMWNTSQIQDPEIPKCGWWNQMAYYNRCKWEEAKVKFHCQRTQSQPGSWRRAISSWKQRNRWEWRPDLESEKVKISLQCNSKKNLTFAMRSSGDYGEVTGAWIEFGCHRNKSKHHSEARFRIRCRWNVGSNTSLIDTCGNTQDVSGANPVDCTMYSNKMYNCSLQNGFTMKVDDLIVHFSMTKAVKMYNIAGNWSCTSDLPSSWGYMNCNCTNSSSSYSGTKMACPSNRGILRNWYNPVAGLRQSLEQYQVVKQPDY | |||||||||||||||||||
1 | 4a6rA | 0.07 | 0.03 | 0.44 | 0.59 | DisCoVER | ------RGEG--V--YLW-------------DSEGNKI--------------------------------------------------------ID--G------------------------------------------------MAGLWC------------------------VNVGY-----------------------------------------------------------------------------------------------------G------------------KDFAAAQME----------------ELPFYTHAVELS----------LLAVT---GFDRVFYTNS-GSESVDTMI-----MVRRYWEKKTLIGRWNG------YHGSTIGGAS-----LGGMKMHDLPIPGMAHIEQPWWGKDMTPDEFGVAARWLKIADKVAAFVGEPIQGAGGVIVPYWPEIEICYDVLLVADEVICGFG-R--TGEWFGHQHF----FQPDLFTAAKGLSGLPIGAVFVGKRVAFNHGFTYSGHPVCAAVAHANNLIMRVS--AP--P-LVMTR-- | |||||||||||||
2 | 1wygA | 0.05 | 0.03 | 0.62 | 0.67 | DEthreader | KLGLCGTKGEGGGSVNVQRIARSHGSQGCTPGIVMSM------------------Y-TLLRNQPEPTVEEIENFLCR---PIGFRTFA------------TE-GIEMKFKNMLF----------------------------------------ED------NVQLPLPHLAA--------QASGEAVYCDD-IP------RYE-NELSLRLPGFVCFLTFA--V--GHIIGA------VADTPEHAQ--AR-VKI-YEDLPAIITDASF-ETNCTIFVTMTQSFVAKMLGV----VRVKRMGGGF-----GGKETRSTV---TGGRHPFLAFSNGGNTE-----DLSRSIMRALMGRICKTLPSNT-F-------FNQKFGISQGLTKMVQVASRALKIPTIHISETSTNTSPAADLNQGEACILLPWEVMSLSATGFYKTP---------L----------------------SGNPFHYF---------------------AIDIGQGAFVQGLGLFTM----------------EELHYS------------PEGSLHTRGPSTYKIPAFGSIPIEF---------S | |||||||||||||
3 | 1vt4I3 | 0.07 | 0.07 | 0.95 | 0.59 | CEthreader | MTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------------------- | |||||||||||||
4 | 5ifeA | 0.06 | 0.04 | 0.71 | 0.70 | EigenThreader | HLGDDDEEP------------EFSSAMPLEDTFFFQPRPLKNPGN-----------------------PNRHIEDEFDAYIIVSF--------------------------VNATLVLSIGETVE--EVTDSGFLGTTP--------------------------TADKRVNEWKTRQVVIALTGGELVYFEMDPSGQ------------LNEYTERKEMSADVVCMSLA-----------------------------NVPPGEQRSRFLAVGLVDNEM----------FLYL-NIGLQNGVLLRTVTGDLSDTRTGSMSSRSWLSYSYQSRFHLTPLSYETLESEQCPEILALEKLG--AVFNQVA-FPLRKFVIHPSNNLIIIETDHNAYTPESIFGAPKAGNGQWASVIPIQGNTVQLEQN---------EAAFSVAVCSNTGEDWYVLVGVAKDLILNPRSVYTYKLVNNGEKLEEVPAAIAPFQG-RVLIGVGIANYISGIQRVIVSDV-------QESRWVTTASDYDTVAGADKFGNTNDEVDNGASQGETIPGGSVYTTLSGG-----------IGILVPFT | |||||||||||||
5 | 4tlgA | 0.15 | 0.08 | 0.57 | 0.41 | HHpred | --------------------------------------RVGDLSPQQQE--------ALARFRENLQDLPILP-NADDYFLLRWLRARNFDLQKSEDMLRRHMEF---RKQQDNI-VTWQPPEVIQLYDSGGLCGCPVYFNIGSLASKQDMIRKRIKVCELLLHECELQTQ---KLG---RKI-EMALMVFDMEGLSLKPAVEVYQQFFSILEANNLIVIRAP----KLFPVAFNLVKSFMSEETRRKIGDNWKQELTKF-----------------------------ISPDQLPVE-FGGTMTDPDG---NPKCLTKI-----NYG-G---------------EVPKSYYLCEQVRLQ--YEHTRSVSLQVENEILFPGCVLR--------------------------------------------------W-QFASD------GGDIGFGVFLKTKMGEQQ-------SAREMTE--VL-----PSQRYNA-----------------------HMVPEDGSLTCLQ-AGVYVLRFDNTYSRMHA----------------------------------------- | |||||||||||||
6 | 2iwhB | 0.15 | 0.05 | 0.35 | 0.28 | MRFsearch | ----EHFFGELAKTAANAMQAVAHIANQSNLSPSVEPYIVKEIQSVASETLISIIKALLPHLTNAIVETNK-----------------WQEKIAILAAFSAMVDAAKDQVAL-----------------------TKKEVKAAATAAMTKATETVRFIPSLIQCIALGATTFVAEVTPATLSIKRKSAVIIDNMCKDPQVIAPFLGKLLPGL---------------------KSNFATIADPEAREVTLRALKTLRR------------------DVSTTLQVVNELLK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 5twvB | 0.16 | 0.13 | 0.85 | 0.54 | FFAS-3D | ------FAGP-----LCIFGIVDHLGKENHVFQPKTQFLGVYFVSSQEFLGNAYVLAVLLFLALLLQRT--------------FLQASYYVAIETGINLRGAIQTKIYNKIMHMSTSNLSMGEMTAGQICNLVAIDTNQLMWFFFLCPNLWTMPVQIIVGVILYILGVSALIGAAVIILLAPVQY------FVATKLSQAQRTTLEHSNERLKQTNEMLRGMKLLKLYA---WESIFCSRVEVTRRKEMTSLRAFAVYTSISIFMNTAIPIAAVLITFVGHVSSTVKALVSVQKLSVQIIGGFFTWTPDIPTLSNITIRIPRGQLTMIVGQGKSSLLLATLGEMQKVSGAVFWNSNL----------PVAYASQKPWLLNATVEENIT---------FESPFNKQRYKMVIEACSLQP-DIDILPHGDQTQIGERGI------NLSGGQRQRISVARALYQQTNVVFLDDPFSALDELLRDDKRTVVLVTHKLQYLPHADWIIAMKDGTIQREGTLKDFQRSELFEHWACTKYL--------------------------SSAGIL----LLSLLVFSQLLKHMVLVAIDY | |||||||||||||
8 | 5n8oA | 0.07 | 0.06 | 0.89 | 0.74 | SPARKS-K | SERKVQFTYTDVLARTVGIAGIDEAISREQLIPLDREKGLFTSG--IHVLDELSVRALSRDIMKQNRVVPRTAGYDAVSVLAQSGQGGAAGQRERVAELVMMAREQGREVQADRRSQMNLKQDEELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQGSALMGVNTYRWQ----GGE--------------QRPATIISEPDRNVRYARLAGDFAASVKAREQAILTQAIRSELKTQGVLGHPE----VTMTALSPVWLDSRSRYLRDMY-------RPGMVMEQWNPET-----RSHDRYVIDRVTAQSHSLTLRDAQGETQVVRSL-----DSSWSLFRPEKMPVGERLRVTGKIPGLRVSGGDRLQVA---------SVSEDAMTVVVPGRAE---PASLPVSDSPFTALKLENGWVETPGHSVSD-SATVFASVTQMARDVRLYSSLDETRTAEK----LARHPSFTVVSEQETLLETAIAGLHAQQAIHLALPVLESNLAFS-----MVDLLTEAKSFAAEGTGYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVTPLM | |||||||||||||
9 | 6qhnA | 0.11 | 0.04 | 0.40 | 0.69 | CNFpred | ---------AAEARAVADRAAAGFA-------------GWSVLGPNARRAVLMKAAAALEARKDDFVQAM-------MAEIGATAGWAMFNLMLAASMIREAAALTT---QIGGEVIPSDK-----------CLALALREPVGVVLGIAPWNAPIILGVRAIAVPLACGNAVILKASEICPRTH-EGVVNVVTNAP--QDAGEVVGALIDHP---------------AVKRINFTG---------STGVGRIIAKRAAEHKPCLLELGGKAPLVVL-DDADLDEAAKAAAFMNQGQICMSTERIIVVEA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
10 | 2pffB | 0.04 | 0.02 | 0.56 | 0.50 | DEthreader | -------------A--VFT------PDKDYLLSIPISCPL----TVLFFIGVRCYEAYP---P------QDYVNKTNSHLKQVEISLVVSPFHS---N--SFNAKDIQIPVYDGSDLRVIERIVDC------------L--PVKWETTTQFKAHILDFGPGGA--VIVAGTLDINPDD--------------------------------------------------------------GGGGGGGGGGG--------------------------GG-GGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----------------GGGGGGGGGGGGGG-G--------GGGGGGG--GGGGGGGGGGG---G-------------------------GGGG-GGGGGGGQ--------------G-Q-MGLYAAQDVWRADILDIVINNPLSFTQPTLYAMSSLVEVVFYR--GMTMQV-VPRDGRSNYGMIQQYVAAGD-----------------KIDIIE---LQKSLSLEEVEG-LFGGGGGGGG-------------- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |