>PF09587 (250 residues) TLLFVGDISFAGPIKYYVDHKYHTYNDTFNDVASFIREADISVGNLESPFANQHVLTHIL RGSKSILLYAIPKAASALRFAGFDAVTIANNHLNDLGGVGANFTTEVLEKTGIKYFGISF GKYDSSQEPFIIKRGRITIAFLGYCKVVTSEKNCSEMRKLFNSGPAIYEDDIATRDIRRL KKAKVDIIVIFMHYGEELTLEPVSSQKHINKHLMSLGVDMIIGTHPHVLQDHCLQDNKLI SYSLGNFLFH |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | TLLFVGDISFAGPIKYYVDHKYHTYNDTFNDVASFIREADISVGNLESPFANQHVLTHILRGSKSILLYAIPKAASALRFAGFDAVTIANNHLNDLGGVGANFTTEVLEKTGIKYFGISFGKYDSSQEPFIIKRGRITIAFLGYCKVVTSEKNCSEMRKLFNSGPAIYEDDIATRDIRRLKKAKVDIIVIFMHYGEELTLEPVSSQKHINKHLMSLGVDMIIGTHPHVLQDHCLQDNKLISYSLGNFLFH | |||||||||||||||||||
1 | 1oidA1 | 0.16 | 0.14 | 0.88 | 1.17 | DEthreader | TVLHTNDHHGHFWRNEY------GLAAQKTLVDGIRKVSVLLLSGGDIN------T--------GVPSDDAEPDFRGMNLVGYDAMA-IGNHEFDNPLTVLRQQEKWA---KFPLLSAIYQTERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFT--D-IEFRKPADEAKLVIQELQQEKPDIIIAATHMGH--YDNGEHPGVEMARALPAGSLAMIVGGHSQDPVMPDQQNGIWIVQAHEWGKYL | |||||||||||||
2 | 1oidA1 | 0.13 | 0.11 | 0.89 | 1.17 | DEthreader | ITVLHTNDHHG--HFWRN--G-YGLAAQKTLVDGIRKVSVLLLSGGDINT-VPESDL----------QDAE-PDFRGMNLVGY-DAMAIGNHEFDNPLTVLRQQEKWA----KFPLLSAIYQGERFKPWALFKRQDLKIAVIGLTTDDT---AKIGNPEYFTDIEFRKPADEAKLVIQELQQEKPDIIIAATHMG-H-YDNGEHPDVEMARALPAGSLAMIVGGSQDPVCMPDQQN-GIWIVQAHEWGKL | |||||||||||||
3 | 2z06A | 0.18 | 0.14 | 0.77 | 3.35 | HHpred | RVLFIGDVMAEPGL-RAV-------GLHLPDIRD---RYDLVIANGENA-ARG--------------KGLDRRSYRLLREAGVDLVSLG-NHAWDHKEYALLESEPVVRPLNYPP-GTPGK----GFW--RLEVGGESLLFVQVMGRIFMD-----------P-L-DDPFRALDRLLEEEK---ADYVLVEVHAEA------TSEKMALAH-YLDGRASAVLGTHTHVPTLDATRLGTLYQTDVGMTGT- | |||||||||||||
4 | 4b2oA | 0.17 | 0.13 | 0.78 | 0.83 | DisCoVER | RILFIGDVVGSP-G----------RDMVKEYVPKLKYKPHFTIINGENAA---------------HGKGLTEKIYHSLIQSGADAIT-MGNHTWDK-----KEIFDFIDDVPNLVRPANFPEGTPGKGITYVKANGKELAVINLQGRTF----------LPPLDDP---FLKADELIAEAA-KRTPYIFIDFHAE-AT-----SEKLALGWYTDG-RASAVVGTHTHVQTDNRILKGTAYITDVGMTGP- | |||||||||||||
5 | 4b2oA | 0.16 | 0.12 | 0.76 | 0.50 | MRFsearch | -ILFIGDVVGSPGRDMV--------KEYVPKLKTKYK-PHFTIINGENAAHG---------------KGLTEKIYHSLIQSGADAITMG-NHTWDKKEIFIDDVPNLVRPANFPEGT-------PGKGITYVKANGKELAVINLQGRTFLPPL-------------DDPFLKADELIAEAAKR-TPYIFIDFHAEA------TSEKLALGWYTD-GRASAVVGTHTHVQTADNRILGTAYITDVG----- | |||||||||||||
6 | 1oidA | 0.17 | 0.16 | 0.92 | 1.22 | SPARKS-K | TVLHTNDH--HGHFWRN-EYGEYGLAAQKTLVDGIRKEVSVLLLSGGDINT--GVPESDL-------QDA-EPDFRGMNLVGYDAMAIG-NHEFDNPLTVLRQQEKWA---KFPLLSANIYQKSTGKPWALFKRQDLKIAVIGLTTDDTAKIG----NPEYFTDIEFRKADEAKLVIQELQQEKPDIIIAATHMGHYDHGCNAPGDVEMARALPAGSLAMIVGGHSQDPCKPDQQNGIWIVQAHGKYVGR | |||||||||||||
7 | 1oidA | 0.16 | 0.14 | 0.88 | 0.71 | MAPalign | TVLHTNDHHG---HFWRNEYGEY----GLAAQKTLVDGIVLLLSGGDINTG-------------VPESDA-EPDFRGMNLVGYDAMAIG-NHEFDNPLTVLRQQEKW---AKFPLLSIYQKGERLFKPWALFKRQDLKIAVIGLTTDDTA----KIGNPEYFTDIEFRPADEAKLVIQELQQEKPDIIIAATHMGHYDNGEHGCNA-PGDVEMARLPLAMIVGGHSQDPVKPDQQNGIWIVQ-AHEWGKY | |||||||||||||
8 | 2z06A | 0.18 | 0.14 | 0.78 | 0.77 | CEthreader | RVLFIGDVM-----------AEPGLRAVGLHLPDIRDRYDLVIANGENAARG---------------KGLDRRSYRLLREAGVDLVSLG-NHAWDHK------EVYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIF----------------MDPLDDPFRALDRLLEEEKADYVLVEVHAE------ATSEKMALAHYLDG-RASAVLGTHTHVPTLDATRKGTLYQTDVGMTGTY | |||||||||||||
9 | 4b2oA | 0.16 | 0.13 | 0.79 | 0.92 | MUSTER | RILFIGDVV--------GSPGRDMVKEYVPKLKTKYK-PHFTIINGENAAHGKG---------------LTEKIYHSLIQSGADAITMG-NHTWDKK-----EIFDFIDDVPNLVRPANFPEGTPGKGITYVKANGKELAVINLQGRTFLPPLDDP-------------FLKADELIAEAAKR-TPYIFIDFHAE------ATSEKLALGWYT--GRASAVVGTHTHVQTADNRIKGTAYITDVGRFKTN | |||||||||||||
10 | 4b2oA | 0.16 | 0.13 | 0.78 | 2.21 | HHsearch | RILFIGDVVG-SPGRD-------MVKEYVPKLKTKYK-PHFTIINGENAAHGK---------------GLTEKIYHSLIQSGADAITMG-NHTWDKKEDFIDDVPNLVRPANFPE-GTP-----GKG-ITYVKANGKELAVINLQGRTFLP--------------PLDDPLKADELIAEAAK-RTPYIFIDFHAEAT------SEKLALGWY-TDGRASAVVGTHTHVQTADNRILGTALGTIIKRFKTN | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |