Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | EIAVYMGDNGETTSLYQNGKVMVYQRNQGCWRVSRERDFSLGDNFNIKALREIMDELIEFLGHCKTFVGLSITGIPYFVLEKSGCSIWEFEGNPLDFLDYILAKEEEEQRENSQQNSTILPTPVETFSGCYRISIKEIQEKNLGVSSKQVLLPFIRQGKFYSLEVLCNHVPPWLENEILLNQLESRTEV |
1 | 1t3vA | 0.08 | 0.05 | 0.58 | 1.46 | HHpred | | IIAIPVSENRPISHFGRAPYFAFVKVKNNAIADISVEENPLAQDHV----HGAVPNFVKE-KGAELVIVRGIGRRAIAAFEAMGVKVIKGSGTVEEVVNQYLSGQLKDSDYEHD--------------------------------------------------------------------------- |
2 | 2yhaA | 0.08 | 0.07 | 0.85 | 0.83 | DEthreader | | IWTYLEKANEGV---------MTFAELNRINPRFSPGMSMSV-PGSEKEFFAKVKELMSSH-QF-VVVLLRIYNMVKRAADIGVHTVCCVEKFLSTGQLYFANVGLKLTNH-NILMVVGYDVTHQSPASAPSI-V--GLVSQWPA---MVWN-NPHGQESM---CDARIHQKELFA-VKTDDFA----- |
3 | 2wfbA | 0.11 | 0.06 | 0.53 | 1.17 | DisCoVER | | RIAVTAEGDGLVDRFGRAAGFVVVDA----AMAAEYVDNGSQTLS----GA--GINAAQVLAGAGVLLTGYVGPKAFQALQAAGIKVGQLELTVRQAVQRFLDPM-------------------------------------------------------------AAGPN------------------ |
4 | 1dt9A | 0.05 | 0.04 | 0.75 | 0.83 | DEthreader | | GFIVI---------DG-S-GALFGTLQGNTREVLHKFTVDLPKKLRMEKRHNYVRKVAETAVLFGLVLAGSADF-KTELSQSFDQVKLVDISGFNQAIELSTEVLSNVKFIQEKKLIY-CFGV---------EDTLKALVEILIV---LIMRYLYLTPEQEK---------------FTES-------- |
5 | 1p90A | 0.10 | 0.06 | 0.57 | 1.24 | SPARKS-K | | RVAIASNNGEQLGHFGSCLRFLVYQVSAKDASLVDIRSTL-----DVALAEDKNAWRVEQIQDCQVLYVVSIGGPAAAKVVRAGIHPLKKGCAAQEAIAELQTVMAPWLAKLV---------------------------------------------------------------------------- |
6 | 2eq5A | 0.05 | 0.04 | 0.81 | 0.76 | MAPalign | | TIGLIR--------VITLILNHGIESAFPELK-VVSRCIDQPKGITEREAEPKIIRLAKEFEGVDAIIISCAADPAVEKVRKLSIPVIGA-------GSSVSAL------------------ALAYGRRVGVLNLTLDLLTDWGREVINAAKRLKEK-GVEVIALGCGMSTIIAPVLEEEVGIPVIDPV |
7 | 1p90A | 0.11 | 0.06 | 0.58 | 2.34 | HHsearch | | RVAIASNNGEQLDHFGSCLRFLVYQVSAKDASLVDIRSTLDVALAE-----DKNAWRVEQIQDCQVLYVVSIGGPAAAKVVRAGIHPLKKPCAAQEAIAEVMAGSPPPWLAKLV--------------------------------------------------------------------------- |
8 | 4jx2A | 0.06 | 0.05 | 0.75 | 0.83 | DEthreader | | GQLILF-----INS---TLYIYN-S-------DRQLKLKQLASNAALDQLHSKISQL-K-IDWHAKVIIRFLVPFVQALSNNKLARIYITPAAKDYYNTVWGARHNRRIIANTSIFLPDRPAI--------PGDYTYR--SEPTEL-SNTVG-------------FW-AGELYISIPGITTGFP----- |
9 | 1p90A | 0.13 | 0.08 | 0.59 | 1.05 | FFAS-3D | | RVAIASNNGEQLDHFGSCLRFLVYQVSAKDASLVDIRSTL-----DVALAEDKNAWRVEQIQDCQVLYVVSIGGPAAAKVVRAGIHPLKKPKGAQEAIAELQTVMA-------------------------------------------------------------GSPPPWLAKLV----------- |
10 | 2yx6C | 0.08 | 0.05 | 0.57 | 1.18 | SPARKS-K | | RVAIPAEDDINVSHFGRSRYFVFVDIEGEDVKNVEVVEVPFEEHG---DLPNFIKDH-----GAKIVLTYGIGRRAIEYFNSLGISVVTVYGRISDVIKAFIGGKLKIDYDWKEK-------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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