>PF09572 (255 residues) NLTNITPDVLRQHPSVLPILRMAAAPPIARDRLIGLAGVSPNLVKNMEEQQRLPPRMNSA TLDAELMKISQIIMRLTDKDIFSWLDTRQPPTDAEVHRAATIVADRLCGAVSDPIIRNAQ ERRQLATIRQWLEQRGYSYIGAGTGLSFERIQPGTFAFRLNIPVLLQGGSKQVNIPIDVV VMPLQSNFGQLPLLIEAKSAGDYTNPNKRRKEEAIKIAQLKSNYGDNVRFILFLCGYFDS GYLGYEAAEGIDWLW |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | NLTNITPDVLRQHPSVLPILRMAAAPPIARDRLIGLAGVSPNLVKNMEEQQRLPPRMNSATLDAELMKISQIIMRLTDKDIFSWLDTRQPPTDAEVHRAATIVADRLCGAVSDPIIRNAQERRQLATIRQWLEQRGYSYIGAGTGLSFERIQPGTFAFRLNIPVLLQGGSKQVNIPIDVVVMPLQSNFGQLPLLIEAKSAGDYTNPNKRRKEEAIKIAQLKSNYGDNVRFILFLCGYFDSGYLGYEAAEGIDWLW | |||||||||||||||||||
1 | 1y88A1 | 0.16 | 0.07 | 0.41 | 0.71 | DisCoVER | ------------------------------------------------------------------------------------------------------------------------LYFQGHMVARLL----E-------------EHGFETKTNVIVQGNC------VEQEIDVVAER-----DGERYMIECKFHNPVYTGLKEAMYTYARFLDVE-KHG-FTQPWIFTNTKFSEEAKKYAGCVGIKLT- | |||||||||||||
2 | 6pcvA | 0.06 | 0.05 | 0.80 | 0.83 | DEthreader | -----------------LA--K--RLLILYGLAEVAGLQV-GRKIYSIVFLLVATKAKEI-IKIPEAMGLCAGQWIYHTHEDAQEARASQ---------VD-NV-HL--EHGVVLEKIVEPRGCFGLTAKILEAFAYFAQRSPFKQAPLEHPLGDFCPNCHIN---------CITTMAAPSWKCELQLRRAIQAVACSELAALSWLVTGVL-L-HC-QSLLPEMLEDITLLVFFVLHFLPRLGASLRLHTA---- | |||||||||||||
3 | 1xmxA | 0.11 | 0.09 | 0.83 | 0.95 | CEthreader | LTIFGARGEFNSPQLDQQLYQLGERWASNALELGPGLATLNYLATTCRKEQKLDVELSDKQQGY--RELNLLLSDLVEA-------------------KIASYENGILTFINEEARRFANGEWLETLVHSTVKQ-------------IQDDMPTIQDRSLNVQVYRQLGEREVRNELDVATVVN-----NKLHIIECKTK----GMRDGDDTLYKLESLRDLLGGLQARAMLVSFRPLRHNDITRAEDLGLALIG | |||||||||||||
4 | 1xmxA | 0.11 | 0.09 | 0.85 | 0.82 | EigenThreader | PVRLVTPLLDTVIYQRLSDVLNKRNITSAIKSAIRELAETLKARGA----SCGL----RHRLLSAYEVFRSY-----HWPIFVVEPNSDDRIT---IADYLTIFTCRKEQKLNEEARRFANGEWLETLVHSTVKQIQD------DMPT----IQDRSLNVQVYRQLGE--REVRNELDVATVVN-----NKLHIIECKTKGMRDGDD----TLYKLESLRDLLGGLQARAMLVSFRPLRHNDITRAEDLGLALIG | |||||||||||||
5 | 1dc1B | 0.15 | 0.12 | 0.80 | 0.53 | HHpred | -SVAKTPKDLLYLEDIQDALLYASG--ISDKAKK-----------------FLT----E---DDKKESINNLIENFLEPA-------GEEFIDELIFRYLLFQGDSLGGT-----MRNIAQQKLTRAIISALDIANIPYKWLSRDKNWMDKPHRTLMYNITVSL--------VKKNVDICLFNCEPQQEKYLLLGELKGGIDPAGADEHWKTANTALTRIRNKFSEGLSPKTIFGAAIEHSEIWDQLQSGS---- | |||||||||||||
6 | 1xmxA | 0.17 | 0.12 | 0.72 | 0.90 | MRFsearch | ------DTQVQD--------------RITIADYLTIFGARGEF--------------NSPQLDQQLYQLGERWASNA-------------LELGPGLATLNYLATTCR----VELSDKQQGYRELNLLLSDLVEAKIASYE-----------PTIQDRSLNVQVYRQLGEREVRNELDVATVVN-----NKLHIIECKTKG-----MRDGDDTLYKLESLRDLLGLQARAMLVSFRPLRHNDITRAEDLGLALIG | |||||||||||||
7 | 1dc1B | 0.15 | 0.12 | 0.80 | 0.77 | FFAS-3D | -----TPKDLLYLEDIQDALL-------------YASGISDKAKKFLTE-------------DDKKESINNLIENFLE------------PAGEEFIDELIFRYLLFQGDSLGGTMRNIAGALAQQKLTRALDIANILDSRDKKYTNWMDKNGKHRTLMYNITV------SLVKKNVDICLFNCEPQQPEKYLLLELKGGIDPAGADEHWKTANTALTRIRNKFSEKGLKTIFIGAAIEAEEIWDQLQSGSRWI- | |||||||||||||
8 | 1dc1B | 0.11 | 0.09 | 0.85 | 0.62 | SPARKS-K | AASVATPKDLLYLEDIQDALLYAS-------------GISDKAKK----------FLTE---DDKKESINNLIENFLEPA-----------GEEFIDELIFRYLLFQGDSLGGNIAGALAQQKLTRAIISALDIANWLDSRDKKYTNWMDKPAKGISWTIHRTLMYNITVSLVKKNVDICLFNCEPQQEKYLLLGELKGGIDPAGADEHWKTANTALTRIRNKFSEKPK-TIFIGAAIEHSMAEEIWDQLQSGSL | |||||||||||||
9 | 1xmxA | 0.18 | 0.13 | 0.75 | 0.87 | CNFpred | ------PQLDQQLYQLGERWASNA--LELGPGLATLN----YLATTCRKEQKLDVELSDKQQGRELNLLLSDLVEAK--GILTFI----------NEEARRFANG------------EWLETLVHSTVKQIQDD-----------------MPTIQDRSLNVQVYRQLGEREVRNELDVATVVN-----NKLHIIECKTKGMR-------DDTLYKLESLRDLLGLQARAMLVSFRPLRHNDITRAEDLGLALIG | |||||||||||||
10 | 6jxgA | 0.10 | 0.07 | 0.73 | 0.83 | DEthreader | -----KAADKSIVTGVVGNCYQDGIRFV--GQLGPIACAKHFMCSCSDWAAQHSAGLDMTRILASWYFVGQ------------GYP---AV----T--WS-SWNGGL----NSCSDRGCDTGHALVAPLDAITPLATLVLSTSTSAAAAAAAETAIVFIT------------WNNGTALV-------ASKNVIVVINS----------VGPL--I-LEDILA-LSSVKAIVWAVSGQ--SGKLPYTFEFYGLS-- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |