>PF09552 (288 residues) RKIYKTGQTRGASQNEIYQNRVSRNSTVLIPYQWWEKCKEPYPGAEYENGFIVLIDPDWY SDHPHADKTLAAKGIVLGVNAVLHFQQRAQWDRYDLRLGDLLPNGMPFTEPTQRISPIGG TVLARIHGTTAEGDKRSQIRVGFNETNLRGAGIRVYEYASTENLEKTRLQLESYYWLAEE SLEMAIDWGMSPKDARKRRDETLQHAHEAGLLEYQRLQAVRIVDEHNVTICPFCLERISA STFYERSEQAVGRETWDLTTTEISLFHIEELRVGALQHRPYNLGWGHH |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | RKIYKTGQTRGASQNEIYQNRVSRNSTVLIPYQWWEKCKEPYPGAEYENGFIVLIDPDWYSDHPHADKTLAAKGIVLGVNAVLHFQQRAQWDRYDLRLGDLLPNGMPFTEPTQRISPIGGTVLARIHGTTAEGDKRSQIRVGFNETNLRGAGIRVYEYASTENLEKTRLQLESYYWLAEESLEMAIDWGMSPKDARKRRDETLQHAHEAGLLEYQRLQAVRIVDEHNVTICPFCLERISASTFYERSEQAVGRETWDLTTTEISLFHIEELRVGALQHRPYNLGWGHH | |||||||||||||||||||
1 | 2wfkA | 0.06 | 0.03 | 0.57 | 0.58 | DisCoVER | LPSLKSSFVLFLPYGSVINYYGYVKPGPDGL-------------------------V-----------------------------------------------------------DGNKKAYYLYVWIPA-----VIAEGVRISPTIGPGDLVSDAFEKSPHW--F--DTWIRVER----S--AIPDQIAKAAKAKPV--QKLDD-----D----D--DGDDTEERHNKYNS-LTRI-----------KIKKLLVRGLYRISFTTYKPKGSFVASVGLLPLIHSNP- | |||||||||||||
2 | 5b68A | 0.07 | 0.05 | 0.70 | 0.67 | DEthreader | ---------TPAR-L--STAKYLDSPRSGV-----------------------MAQIY-SVRSTLD--NLASVVAQDGADFLLINPMHDSPPNPIYIRLQLCDEQLAA--QK-AVDAGMSIGIMADLAVGVHPSSQPPHGLGVQDALAQRGIMGTS----RRQYRTTVTTLPPTGYLEGEHIALREGVNTDPAAELAEDLQWQAEILDVALRGLAELLEGLH------VCLVDMVGEKRAQN-QPG-T-----------------VAKAS---------------KRD | |||||||||||||
3 | 1vt4I3 | 0.07 | 0.07 | 0.98 | 0.56 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 3kozA | 0.09 | 0.09 | 0.94 | 0.67 | EigenThreader | RMAAWHGADAQRKALDLIEEEVGRPINYHSYVDIAVMFAEEG-------VNGAHQDPQYNVLYRNINCESKTIMAWA--DMAQIDGAHNANATAREAWPPTAPPAPLPYAVALREMFEGYRMRAQMNTKYMEASATVTHVLNLLISKLTRADITITPDPWHIYNIEACDTAKQALIGM---DNVRMEETTSKRVAEFAAIEFAKKMG--EDEHSVGLREVIDYLGTSVPADAIL--ASTIKNMKRIHELAVEKGIRDKIMIGCGGGFGRGSKGIHVATFLVKKRREMR | |||||||||||||
5 | 4l0kA | 0.15 | 0.07 | 0.46 | 0.80 | HHpred | ------------------------------------------------------------------------------------------------------------KTVRTAYSKHFPHKCQLPLGHSGKDDD--ILKFNLDMQSLPELKIREK-AADYDSCIDVARKLTWLAYQLHGAPI-------PDSF-------TKNYLEEF----------FGPM-VAGSTNCEICKLPLTIDLFSEA---------------AVETAHKTPRL-----HNAENVGFAHR | |||||||||||||
6 | 4l0kA | 0.15 | 0.06 | 0.40 | 0.58 | MRFsearch | --------------------------------------------------------------------------------YVAILDDDILLEKFNLDMQSL-----------------PEITRLKIREK----------------------------AADYDSCIDVARKLTWLAYQLHG----------APIPDSFTKNYLEEFFGP------------------GSTNCEICKLPLTIDLFSEAA---------------VETAHKTP-----RLHNAENVGFAHR | |||||||||||||
7 | 1tjlA | 0.16 | 0.06 | 0.34 | 0.43 | FFAS-3D | ------------------------------------------------------------------------------------------------------------------------------------------------------------EYMNEAQLAHFRRILEALRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIVEDEDFGYCESCGVEIGIRRLEKTLAEIREKQ---------------------------------- | |||||||||||||
8 | 4fyeA2 | 0.13 | 0.10 | 0.80 | 0.64 | SPARKS-K | EPVPNQHLAYGYPGEQVFKDPMLDGKQVVVVNS--QYDKHGRPVTG-RDTLIHRFKA------PNSKE---------GEEQFIMYIPTKRQQRL------MGKDESDLVLGNS----SMARMIAGTRH---SDGTVTIHHDSFSGP-----GARMPDFADDYKKLAIKAVTLINQEEVIQTLAQRQIDRMTNEDLWNRAQLIKLYVEHNPL---------------SVTECVTAGQRVNQKEQFEYVRQMMG------SKAKITIQTGSNTEVEAVGYQARMSSWGVN | |||||||||||||
9 | 4a15A | 0.13 | 0.08 | 0.60 | 0.58 | CNFpred | ------------------------------PYESMKAA--------LPDADIVIAPYAYFLNRSVAEKFLSHWGVSRNQIVIILDEAH--------NLPDIGR--------------SIGSFRISVESLNR-AYGDPELSQKIH---------------VSDLIEMIRSALQSMVS-FQEFMEYMRIMNRSEREIRSLLNYLYLFGEY----VENEKEKV-----GKVPFSYCSSVASRIIAFSDQD-----------EEKYAAILSPE------------------- | |||||||||||||
10 | 1ps9A | 0.08 | 0.06 | 0.75 | 0.83 | DEthreader | ----------------------RVLMGSMHGEEYPDGRLAFYAERRHGVIVSGGIAPDAMLNDASQIPHHRTITEAVHKIALQILHTGVAEILIDFARCQLAREAGYDGV----------EVMGSYNELTNDQWGRRFA-DLVEWHEARPTINARPFLADLINTCIGCIGQFNIAKQI-PG------------------YETLRYYRRMI--LASGIVPR--SYLDVLRCGGIGFDTMYQPGESTSQNGFCNISSLGGLMTIH---DARRAI--A---TRL------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |