>PF09546 (322 residues) FNVEKITKDLSAGKLEWNMDSLFKKVLGLLLKEIYLNAKIMLQLIVLAIICGILTNLQSS FGKEGVGEVAFFACYIFLVGVMIKSFTYAVNLGRDVIDNMVMFMQSMVPTLMTLLISTGN ITSASIFQPAILFSVQIIGTIIKNFLIPVLFFTTALSMVNNISDKFHVTKLIDFMKQLGK WCLGILLTGFIGVITVQGLASSVVDGVGSKTAKFAVGNFIPVVGGILSDAVDTVIGCSLI LKNAIGIAGLIIIVLICFIPVVKIMALITIYRLTGAIIEPVSDKRIVQCITDLGNSLTLI FAMVVSVAVMFLLSITIVIGAG |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | FNVEKITKDLSAGKLEWNMDSLFKKVLGLLLKEIYLNAKIMLQLIVLAIICGILTNLQSSFGKEGVGEVAFFACYIFLVGVMIKSFTYAVNLGRDVIDNMVMFMQSMVPTLMTLLISTGNITSASIFQPAILFSVQIIGTIIKNFLIPVLFFTTALSMVNNISDKFHVTKLIDFMKQLGKWCLGILLTGFIGVITVQGLASSVVDGVGSKTAKFAVGNFIPVVGGILSDAVDTVIGCSLILKNAIGIAGLIIIVLICFIPVVKIMALITIYRLTGAIIEPVSDKRIVQCITDLGNSLTLIFAMVVSVAVMFLLSITIVIGAG | |||||||||||||||||||
1 | 6idpA | 0.10 | 0.10 | 0.98 | 1.29 | FFAS-3D | ---SSLAKQLFQ----MTWPMLFGVLSLMSFQLVDSPIQMVIIGIQVGLGIATTAVISRAIGAGKTEYAKQLGGLVIVIGGIGVALIALVLYLETVFAIIDHYWLWWLAFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIFAAIATIIAFGVGIAIVAPKVWQDLNISQSLTALGHIMGPAMLSQLLPPLSSMFATKLLAVAAWALGSRFEFFATMSLPPMIGRMLGTHIRQLVRIACQFVLGFQLLIALVTVSQILNLHLVIVPISLGALLMVSVANALGKSYVALTISALRGIEGLFIGALVGNIIAGWAAWLAYQKA- | |||||||||||||
2 | 5gpjA | 0.13 | 0.12 | 0.97 | 1.26 | CNFpred | FRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGI----YTKAADV-NPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLN-HELTAMLYPLIVSSVGILVCLLTTLF-IEPALKKQLVISTVLMT--GVAVVSFVAL-FLCVAVGLWAGLIIGFVTEYYTSYSPVQDVADSCNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMA-IRERTDALDAAGNTTAAIGFAIGSAALVSLALFGAFVSRA | |||||||||||||
3 | 5l22B1 | 0.08 | 0.07 | 0.85 | 0.94 | DisCoVER | -------------------------YKKTLIIVGLFSLFINILF-LLPSIYMLAVYDIVVPSTSPTLLVITALAVVLYFALGLLQSVR-----AKVMQIISLKLDSENKEVFTSSFEYAK--ASAQPI-NDLYQLKQFL---TSPVLFAIFDLVPIYFGVLF-VFHYYGVMAILSMAVIVALAILNEYITKKKL---KESNELLVRSTNFLNRALLNAEVEALGMRNNLYKKWMNFYSKHLSAFEEATDR------NNFLSNLTRIFRIMAQSLMLGLGGTTG-MIVAGSILLGRILGPIDTIVNWQIGNTKVAYTRLNEF- | |||||||||||||
4 | 4av3A | 0.06 | 0.05 | 0.74 | 0.83 | DEthreader | ALLMIFTT---------FL-GA--SA-SAGIVGMKMATRANVRVAEAA--R-----------------TTKK-IGPALKVAYQGGSVMGLSVGGFALLGLVLVYLFGKGQVNLNYFPIYVHQVPKETIQALISYPIFFALVGLGCSMLGILYVIVK--KPS----DNPQRELNISLWTSALLTVVLTAFLTYYL-LQGLDVLGF----------S--FSAIIIFSGTLVGILAD-GLY--A------------------ATSVSVDSYGPIADNAGGSEVRKITDHLDAVGN-TA-IG--FA--SA-FA--SL-ASY-FSII | |||||||||||||
5 | 4av3A | 0.09 | 0.09 | 1.00 | 0.85 | CEthreader | AHETKAIFKVAIVIAILLMIFTTWQTGVAFLLGAVMSASAGIVGMKMATRANVRVAEAARTKKIGPALKVAYQGGSVMGLSVGGFALLGLVLVYLIFGKWMGQVDNLNIPFAMTVSGYAAIVSSIILASYMFPIYVQKIGENLVHPIFFALVGLGCSMLGILYVIVISLWTSALLTVVLTAFLTYFYLKDLQGLDVLGFRFGAISPWFSAIIGIFSGILIGFLGMKSVFPPTLTLVLGILFADYFAGLYGVAIAALGMLSFVATSVSVDSYGPIADNAGGISVRKITDHLDAVGNTTAAIGKGFAIGSAIFAALSLFASYMF | |||||||||||||
6 | 2onjA1 | 0.05 | 0.04 | 0.74 | 0.82 | EigenThreader | AIGIALFIFVIV-----RPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQRFYAN------------------NQVGQVISRVINDVEQTKDFILTGLWLDCITIIIALSIMFFLDV--KLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISG---------------------SITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLID-EDYD-------------------------------------- | |||||||||||||
7 | 2e76A | 0.16 | 0.09 | 0.54 | 0.28 | HHpred | ------------------------------------IFYCLGGITLTCFLIQFATGFAMTFYYKPT-----------------------VTEAYASVQYIMN---E-VSF--GWLIRSIHRWSA-----------------------SMMVLMMILHVFRVYLTGFKKP-------RELTWISGVILAVITVSFGVTGYSLPWVGYWAVKIV-SGVPEAIPVVGVLISD---LLRGGSSVGQATLT---RYYSAHTFVLPWLIAVFMLLHFLMIR----------------------------------------------- | |||||||||||||
8 | 5xjjA | 0.12 | 0.12 | 0.99 | 0.55 | MRFsearch | --LTAELKRVTRLAAPMATVTIAQYLLPVISVMVAGHTNVTGFSIMYGLVGALETLCGQAYGAKQYEKIGTYTYSAIASNIPICFIISIIWFYIENILIPVLFAQAIVIPLTRFLLTQGLVLPLLYTAVTTLLFHVFVCWVFVATSVSFWFYAVILSCYVRFSSEDFVSCVKQFFQYGVPSAAMICLEWWLLLILCSGLLSNPKLETSVLSICLTTETLHYVISSGVAAAVSTRVSARVSVLAGLCLWLVESAFFSILLDLSPLLCLSFILAVLNGVARGSGWQHIGAWNNIFSYYLGLWCGVVIGSTVQATVLAIVTASM- | |||||||||||||
9 | 3mktA | 0.11 | 0.11 | 0.96 | 1.27 | FFAS-3D | -RYKKEASNLIK----LATPVLIASVAQTGMGSIAASIWLPSILFGVGLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTAMATKTVGYMHAVVPAYLLFQALRSFIGFIGLLLNIPLNWIFVVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFEKELIRLFRLGFPVAAALFFEVTLFAVVALLVATVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLAANVGLMTGLATACITALLTQLLLFAAIYQCMDAVQVV--------AAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMT- | |||||||||||||
10 | 2x1gF | 0.08 | 0.08 | 0.96 | 0.95 | SPARKS-K | PLYAHLTRILVRKLAKWS-----SDDLECFRCYRQDISDTFMYCYILEILAAMLDEAIADLQRHPKLEACIYSFQSVQIPRLMRVLAELLGTALETMGSYCNWLMYIPPAINLLVRGLNSAQATLGLKELCRDLKPYADPLLNACHASLNLMFSIGKLMSLLRPEEYLDIIVSPCFEELQAICAARIRTIFRLNMISTLFSSLVMQRTMPIFKRIAEMW----VEE----IDVLEAACSAMKHAITNLRSQPMLQDLCLFIVASFCCAPTLEISKTAIVMFFKPLMQQLLREFIQHSFKLFSNISDTMETFFGCLTQIIKKI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |