>PF09545 (366 residues) MTYYENIREMTKIVPVQLVNFEEPRDKARTPTQASSNFITNKEQGDWAENLIARAINETS NNFVAVKYGKSDNLVAGEDGFDAFYQDFQNELDTIGKRPDLLIFNKVDFDNSLGFDISQE PHEEITDYVKKAIAGIEVRSSAFLIDRYEEAMQARTEKFVQIALETKDKILTDFSDVLEH PARQSYIELLNSITASTLNVADFRVPSWSSSDRLIQVKNLFKQLKNAIKEIQKRDYLSIT PKVEDLKVVYKWIETFNVPHFYFQVFFDKVYGISFEQILKIISDSDNDGVIFSVETDTKN QNKTTIKINSKFGVPIALKVDEPLHESVRKEMDRGRLLFYVTFKGGTAYLDIENLRAILN LEESIF |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MTYYENIREMTKIVPVQLVNFEEPRDKARTPTQASSNFITNKEQGDWAENLIARAINETSNNFVAVKYGKSDNLVAGEDGFDAFYQDFQNELDTIGKRPDLLIFNKVDFDNSLGFDISQEPHEEITDYVKKAIAGIEVRSSAFLIDRYEEAMQARTEKFVQIALETKDKILTDFSDVLEHPARQSYIELLNSITASTLNVADFRVPSWSSSDRLIQVKNLFKQLKNAIKEIQKRDYLSITPKVEDLKVVYKWIETFNVPHFYFQVFFDKVYGISFEQILKIISDSDNDGVIFSVETDTKNQNKTTIKINSKFGVPIALKVDEPLHESVRKEMDRGRLLFYVTFKGGTAYLDIENLRAILNLEESIF | |||||||||||||||||||
1 | 2d33A | 0.07 | 0.05 | 0.70 | 0.61 | DisCoVER | GLER--E--TL--RVNADGTLLTHKWITTDFAEALLEFI-IEHMLTFMRDLHRYTAR-NMGDERMWPLSMPSYLAQYGRFKTLYRALMQ--T-----ISGVHYNFSLPISAGYFRVIRN--------YGWVIPYLFGASATSLRLSDLGYTNKSQS-GLKQAI------K----------------------T----P--SYAKIGIEKDGKRLQINS--N--VLQIENEL----YA-P---------I--RPKRIEYIEVSLDINPPIGVMVWCAL-------ADAPE----MSSSELACTRVNWNRVILEGRTFSARIL----GIGG--------TGKFAEAYRNLLR-------EEPLEILE- | |||||||||||||
2 | 3zyvA | 0.03 | 0.02 | 0.64 | 0.67 | DEthreader | VMIHFSA-TACLV------------------HPVQERIAKGHGTQCG-F-----------------CTPGM--VM----SIYTLLRNHPEPSTEQIMLNLCRG--------KQLKTLAGRHLTSDLPFRQAPRQQN----TGMQSFQDVPGRPIMHQSGIK--T-EAVFCDDMSVLPGELFAVVPKEMDIYVAAFTQEMVSKPLLVAFILERRDDM-T---GVELGQGINKSTAD-----AACSE--VE--ID-CLTGAH--------------K--NI--R----------TDIVMD---------DIGQIGAQGLEELK---------------------GPHQYKIA---AGTFLGCSFFAAI | |||||||||||||
3 | 4p7hA1 | 0.09 | 0.09 | 1.00 | 0.51 | CEthreader | QSILITGESGAGKTVNTKRVIQYFAVIAAIGDPGKGTLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVIFQLKKPELLDMLLITNNPYDYAFISQGETTVASIDDAEELMATDNAFDVLGFTSEEKNSMYKLTGAIMHFGNMKFKLKQEEPDGTEEADKSAYLMGLNSADLLKGLCHPRVTKGQNVQQVIYATGALAKAVYERMFNPRQYFIGVLFEQLCINFTNEKLQQFFNHHMFVLEQEEYATDMTFKAKLFDNHLGKSANFQKPRNIKGKPEAHFSLIHYNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFANYQTVSALHRENLNKLMTNLR | |||||||||||||
4 | 4v0qA | 0.08 | 0.07 | 0.93 | 0.60 | EigenThreader | RGGWSYYCAGGWNIVKLMSGKDVFYLPPEKCDGESSP---SPTVEESRTIRVLKMVEPWLKNNCIKVLNPYM------PTVIEHLERLQRKHGGRNSTHEMYWISK---DVDLGAEPETPNMDVIGERIKRIKEEHNPFGQQRVFKEKVRKVMEITAEWLWRTLGEEFTKKVRTNAAVEDWKLVDRERELHKLGKCGSCVYNMMSRAIWYMWLGVRYLEFEALGYILRDISKIPGGAMYADDTEHRQLANAIFKLTYQNKVVKVQRPTPDIISRKEAQLVRQMEGEGVLTRMAISGD------DCVVKPGKVRKDIPQWQPSKGHHFHELIMKDGRKLVVPCRP-------QDELIGRARISQGAG | |||||||||||||
5 | 2pffB | 0.15 | 0.12 | 0.83 | 0.58 | HHpred | YLEGNDIHALAAKLLQENDTKTKIRMAKRPFDSNSALFRAVG---------------EGNAQLVAIFGGQGNTDDY-FEELRDLYQTYH------VLVGDLIKFSAETLSEEWLENPSNTPDKDYLLSIPISCPLI------G-------VIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQG-LVTA-VAIAE---------TDSWESFSVRKAITVLFFIGVRCYE------AYPNTSLPPSILED-SLENNEGVPSPMLS-----ISNLTQEQVQDYVNKTNSAGKQVEIVNGAKNLNLTLRKAKAPS---GLDQSRIPFSE--RKLKFSNRFLPVASPFHSHLLVASDLINKDLVKNNVSF | |||||||||||||
6 | 2q6tA2 | 0.09 | 0.05 | 0.58 | 0.40 | MRFsearch | -TGFKELDQLIGTLG---------------------------------------------PGSLNIIAARPA------MGKTAFALTIAQNAALKE-GVGVGIYSLE------------MPAAQLTLRMMCSEARIDM---------NRVRLGQLTDRDFSRLVDVASRLSEAPIYIDDTLTLMEVRARARRLVSQGLIIIDYLQ-LMSGPNRQQEIAAISRGLK-------------------------ALARELGIPIIALSQL-----------------------GSIEQD------ADLVMFIYRD-----------GIAEIIVGKQRNPTGTVELQFHASHVRFND-------------- | |||||||||||||
7 | 5nl6A | 0.14 | 0.08 | 0.57 | 0.69 | FFAS-3D | LDFLRATEGMVH------------------------DYEQRAQALENIEAAIYHQVKEQINETKNYRKGDKRAFIKEQGDLATLFGQINSKLRGMKRPV--------------YVAPEGLDPKSLEGYIAN-ISEAERALRSKLNTAMRNCLIALRKAFADPANATDAKI-NEYRTFVTDETSEEQVATLKAK-----------------LEELKQVEAQLPPIEEAEKACEDADNEYTDVSFDDLQ--FNYEQTVS----------------MFEKKIVYIEA---------------------------------------------------------------------------------- | |||||||||||||
8 | 5amqA | 0.12 | 0.10 | 0.88 | 0.55 | SPARKS-K | FWKHPIYKEFKMSMPVPERRLFEESVKFNAYESERWNVKIREYTKKDYSEHISKSAKNIFL-------ASGFYKQPNKNEISEGWTLMVERVQDQRQKPSIHFIWGAHNPGN------SNNATFKLILLSKSLQSIAFKSLGKMAIEYEEFCMSLKSKARSSALSEKLKLFKNFCGIVSKPKDANMYLASLTMMEQSKKILSKSNGLKPDNFILNEFGSRIKDAYDNMHKIFETG--YWQCISDFSTLMKNILSVSQNRHNTFRIAMNNVFAIVF---------------------PSADTVVYSIIVLHKEEENIFN----PGCLHGTFKCMNGYISISRA-----IRLDKERCQRIVSSPGLFL | |||||||||||||
9 | 5h8wA | 0.11 | 0.09 | 0.78 | 0.69 | CNFpred | ---DETKRFLFDELPTA------------------EEFYDYGERNNVCPYESMKAALPD-ADIVIAPYA----YFLNRSVAEKFLSHWGVSR-----NQIVIILDEAH---------------NLPDIGRIGSFRISVESLNRADREAQAYGDPHVSDLIEMIRSALQSMVSERCGKGDVRIFQEFMEYMRIMNK-------------RSEREIRSLLNALYLFEYVENEKEKVGKVPFSYASSVASRIIAFSDQDEKYAAILSPGYMQAAALDPSGILEVLK-------------------ESKTIHMSGTLDPFDFYSDITGFEIPFKKI-PENRYIAYYDGVSSKTLDEKELDRMATVIEDII | |||||||||||||
10 | 5yijA | 0.06 | 0.04 | 0.60 | 0.67 | DEthreader | --SKG-ER-Q---------------L--P-CIHDDHVLKLEQQFFRDLLAK----------------AIAQNRDKGST--FKEVLITTLMTPLTSK--------PFKIKLNDLSKMSGTATMDALVAVKSPDFTPRHSYAVEPFLRMQAAKLAEVKSSIEKAQRAPDLETIFNLQNEVEVKNVGPVLENSLSGMESDTDTLSLAFPSQWFARQAKRQMDAIKQMVGNVVLDALTQCQ----------------------------LEKQNIA----------------------IQS------QELESLQRAV--------------------------------------I--HVGT--D-VDFS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |