>PF09544 (294 residues) VLASGAATAQPSPTVSGLGVRRVEISAEPSSAVPPPEVQISPRMSTSFEFDSALDPAKVV LEGEERFSLVDLGRSTLRLVPSEQLLPGERLLLTVRFQDGSVPLDAAFVLVAHPARGERI VEVWRQARTAESYQQEAKEARAETQQCHEENARMRAEQREPSGIAGLLANGVIQKEEGVA AKLLRVNEEVRQHPGNALWAHRAWSYRAPVRVAVAVEFENPDAANPWTAEGASLVSKPGT SLKILTVWQKAPISRYPFGRVVVEAEATPDAAQGPFTLKLWGPGGLRAITLSGV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | VLASGAATAQPSPTVSGLGVRRVEISAEPSSAVPPPEVQISPRMSTSFEFDSALDPAKVVLEGEERFSLVDLGRSTLRLVPSEQLLPGERLLLTVRFQDGSVPLDAAFVLVAHPARGERIVEVWRQARTAESYQQEAKEARAETQQCHEENARMRAEQREPSGIAGLLANGVIQKEEGVAAKLLRVNEEVRQHPGNALWAHRAWSYRAPVRVAVAVEFENPDAANPWTAEGASLVSKPGTSLKILTVWQKAPISRYPFGRVVVEAEATPDAAQGPFTLKLWGPGGLRAITLSGV | |||||||||||||||||||
1 | 2qsvA | 0.11 | 0.07 | 0.64 | 0.75 | DisCoVER | ----------------------------GPLQVSNARLLFSPEGVVRLVVNNTDLQVAVVSLPSFVSLDRRLQAEPRELNLSLAVPPGKDEPLVLEVTSPEKKAVDSVVSLPLVDNFP----------------------------------------------------------------------ALTAAQTGVELSTYLDGQLDGETTKAAIEIRNVGA-GPLRLHSVTTRNP----ALTAVPDR-TEIKPGGSTLLRIAVDPQVKWQSIAADISIICNDPLRRIKVKA- | |||||||||||||
2 | 6lz1A | 0.08 | 0.06 | 0.77 | 0.83 | DEthreader | FDTAWCSQIGGS---GEIRQF-DTF---------GYSSQIPQRDRFLTQK---LSWNNINSFPTFNWCHMPNTYTG----LPSWN---GELYFEF--------HRGTY----------LLQFHDVSCIEM-VYKDAIPIMSKVLKNTEALLWILLNTLPWNVRG-VITETNKLVYSLHPANRVLLANQYV-FEVSLY-VLATISLEGYDCSFTGNFTCVWECKFLK-CHQKFADYSDFTYGVSVL-NDCKYSLLRSHTIRYAVYP-HS--KP----TV-A-------------- | |||||||||||||
3 | 4c47A | 0.05 | 0.03 | 0.61 | 0.48 | CEthreader | ------------------------------------------------------------------------------------------------------------DYFADKHLVEEMKEQQKEQETKINLLEKQQKEQEAKINLLEKQQATIINTTKKVTEVVGRVERKQRLFDYTELDPSQTHYFIINNGNIGLAGRILSIEPIDNGSVIHLDLVNLLSIPVSNLAFNMTWGTKKPLLLNTKMDSTIELLPGAWTNVTLTLKGVSPNNLKYLKIGIDMENVIFD------ | |||||||||||||
4 | 6h7wJ | 0.06 | 0.04 | 0.71 | 0.78 | EigenThreader | ---------FSTPDADKRAMVDVKL-------DKNRRPLYMDGESVKVRPKDGKRLEHIKVQFLSLVQELAAPHPQFDFNFKNVEKQYESYFVRVTVSRRMADVIREKDIWVYSYRI-----------------------------------------------------PPELNSSIKMDVGIE----------DCLHIEFEYSYHLKDVIVGRIYFLR----LKIKHMLSIIRRVAPNQTLVRFEIMDGSPSRGETIPIRLFLGGFDL---TPTYYLSLVDARRYFKQSEII | |||||||||||||
5 | 1yewA | 0.14 | 0.12 | 0.85 | 0.54 | HHpred | ---------------------KFHVFEGWPETVDEPDAFLMPGPVFIRKIGGQLVPRSVRLEGTYDFRVVLKARRDWHVHTMMNVQGGGPIWITVE---G-SMSEFRNPVTTLTGQ---TVDLSRRPIFIPRLLM-----------VDAG----RADSATDRKVILIVVMAMSSAPITIPLQAGTMRMKPLELPAPTVSVVEDATYRVPRAMRMKLTITNH-GNSPIRLGEVRFLDSDVYKEDGLSVSDNSPLAPGETRTVDVTASDAAWEVYRAGLLFFFDATGNRQVVIDA- | |||||||||||||
6 | 2pn5A1 | 0.10 | 0.07 | 0.73 | 0.65 | MRFsearch | ---------------TVVKQSQITVYR------YAYRVELIKGLPFKCALQFTGISGKVEVSDVRFETTTTSGLIKLELQPSEG---TEQLSIHFNAVD-GFFFYEDVNKVETV--TDAYIKLELKSP---------------------------------------------IKRNKLMRFMVTCTEFVYYVMSKGNIIDAGFMRPN-KQPKYLLQLNATEKMIPRAKILIATVAGRTVVYDFADLAFQE-----LRNNFDLSIDEQEIKPGRQIELSMSGR-PGAYVGLAAY | |||||||||||||
7 | 5vmmE | 0.09 | 0.08 | 0.87 | 0.71 | FFAS-3D | ---KNPAIKDKDHSAPNSRPIDFEMKKENGEQVKPARVIFTDSKPEI----------ELGLQSGQFWREVYEGDKKLPIKLVSYDTVKDYAYIRFSVSNGTKAVKIVSSTHFNNKEEKYDYTLMEPEKLKAEYKKKLEDTKKALDEQVKSAITEFQNVQPT--------NEKMTDLQDTKYVVYE-SVENNESMMDTFVKHPIKTGMLNGKKYMVMETTNDD-----YWKDFMV---EGQRVRTISKDAKNPYVEKTLYDAIVKVHVKTIDYDGQYHVRIVDKEA--------- | |||||||||||||
8 | 4es8A | 0.08 | 0.07 | 0.89 | 0.79 | SPARKS-K | ------------EELPDDL---MNFKGTWEVSADGSSGRFFSGATDSYVFHLIPKPGWREHNEVKDS-YIKIDKQSIAARYKTSTTAPYSVAFKVNTKSLIKDHKITFEQGQIASGITVDYRIGSAFNKTTDDSFKISDESKYASNVEQGFKQREQGRTLKEGPMSLVLLSKVEKKLDVEFKNLKIIDVT-----NPSQLDKGVAYVGNKN--VQLTLKSDDGRTNFEGDEISLFNSRGELLQTVTVTKDQQNP--------ISITLSEDKNKEKLKVSIKQKQSKKTFFFEVG | |||||||||||||
9 | 4d94A | 0.09 | 0.06 | 0.61 | 0.87 | CNFpred | ------------------ISGKVEVSDV-----FETTTTSDNDGLIKLELQPSEGTEQLSIHFNFFYEDVNKVDAYIKLELKSPIKRNKLMRFMVTCTE---RMTFFVYYVMSK---GNIIDAGFMRP----------------------------------------------NKQPKYLLQLNATEKM------IPRAKILIATVAGRTVVYFADLDFQ-----ELRNNFDLSID------------EQEIKPGRQIELSMSGRP-----GAYVGLAAYDK----------- | |||||||||||||
10 | 1ulvA | 0.11 | 0.07 | 0.64 | 0.67 | DEthreader | ------------------EGTMSEVYYPHADTPN-R-VELADPKASVTDSTFG-------------------V--SYTEWKLNGLRTQYSTVSHEDKTF---AFIASLT------------------AE-TH-------------------------------------GA--YY--GSRIGALSDPAGDDNYRYYAFDLTGVDVYDAGDDYAFVATIAGEVTNPWISHQRVNIYGLEHAWSVIVAVSLLAVP---EARQIVTVALGGLDPATARMSVAMFGNAVRNADVLVLG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |