>PF09531 (627 residues) ALHRRFVHASALALSVCYFVAFLLGDKSSFLWSWFPIGACGFRAVLLFLSSLVVFVLRVG QMHLGSRTTASPIGTFKYLVPLNIIQTFGWYLFSAWWFSEIYKWSCPTSAQLEWVKRGRP HERAALNERPIYLHTYHVLLAIAQSIVHLYYDYDRVPIPVVKPDSGASDRRTHPLAPVSK RIQSALPEMIRGGLTRSALVAAICPFAYVLLLRRPAWSFTLYFAKLFWNFPRSAADPPGV IPDFGVGMIVRTAISGALLTLCWQSANLFFSMFISKEPLKLGQPLTSEAKDPNGSLLTGL KAKKETVKAFAFWELSLISQQFPDRRKAIFNDIDREGGSTWSQILQSATEVIKGVSSRID EKKTPISNAKPEQQTEKSQPVLHALPRLAEPPKEDNIFASSPKAVSRHEKIGEALSSAAK KYGQSPDWTPAARARARDVFDRASSAMLSPERKQKLLASSRELKLLTGPTSKPENVHPLL AQALRSPIGLIFRQTYARRLSGIVLGTPHANTSSIVDAIESLTRLLIASLAEDQYGKVQG DVPGVVRLFTETITVLEPFVNGGLDAHWTDVNFPPSSDPDAQAKARRVPEVDLVLDTLRS CLKDLLSAFNLYFKDVGLVGKDLRLAK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | ALHRRFVHASALALSVCYFVAFLLGDKSSFLWSWFPIGACGFRAVLLFLSSLVVFVLRVGQMHLGSRTTASPIGTFKYLVPLNIIQTFGWYLFSAWWFSEIYKWSCPTSAQLEWVKRGRPHERAALNERPIYLHTYHVLLAIAQSIVHLYYDYDRVPIPVVKPDSGASDRRTHPLAPVSKRIQSALPEMIRGGLTRSALVAAICPFAYVLLLRRPAWSFTLYFAKLFWNFPRSAADPPGVIPDFGVGMIVRTAISGALLTLCWQSANLFFSMFISKEPLKLGQPLTSEAKDPNGSLLTGLKAKKETVKAFAFWELSLISQQFPDRRKAIFNDIDREGGSTWSQILQSATEVIKGVSSRIDEKKTPISNAKPEQQTEKSQPVLHALPRLAEPPKEDNIFASSPKAVSRHEKIGEALSSAAKKYGQSPDWTPAARARARDVFDRASSAMLSPERKQKLLASSRELKLLTGPTSKPENVHPLLAQALRSPIGLIFRQTYARRLSGIVLGTPHANTSSIVDAIESLTRLLIASLAEDQYGKVQGDVPGVVRLFTETITVLEPFVNGGLDAHWTDVNFPPSSDPDAQAKARRVPEVDLVLDTLRSCLKDLLSAFNLYFKDVGLVGKDLRLAK | |||||||||||||||||||
1 | 6wg3E | 0.10 | 0.09 | 0.87 | 1.31 | FFAS-3D | SVRKRVIKILRDICITEMCVKMIRRVNDEEGIKKLVNETFMTRKILNITDVVAACLLQNLLKSEEDSSYKPVKKACTQL--VDNLVEHILRLVACITTLFLFSKIRPQ----------------LMVKHAMTMQPFMVICNVAKILELVV--------PLMEHPS----------ETFLATIEEDLMKLIIKYGMTVVQHCV--SCLGAVVNFKFVWACFNRYYGAISKLKSQHQEDPNNTSLLTNKPALLRSLFTVGALCRHNIKDKVLEL-----------------------LMYFTKHSDEEVQTKAIIGLGFAFIQHPQEVKNLYNNIKNSSVNLKIQVLKNLQTYLQEEDTRMQQADRDWKKVAKQEDLKEMGDVSSGMSSSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHDPEPAMRNKADQQLVEIDKKYAGFIHMKAVAGMKMSYQVQ---QAINSALCSHLYSMIRGNRQH--RRAFLISLLNLFDDTAKTDVTMLLYIADNLACFIMHHIDI----TLSVSGSNLLQSFILLLLMLKQHLKNLCGFSYSPSESAKVYDKAINRKTGVHFHPKQTLDFLKRSIVKQYLDFKLLMEHL----------- | |||||||||||||
2 | 6xu2A | 0.14 | 0.09 | 0.67 | 1.53 | CNFpred | VIKRMLVQCMIRTLSARATAAFILANEVALFKHFADLLPGFLQAVNDSCVLKSLVEIADTVPKYLRPHLEATLQLSLKLCGDTSLNNMQRQLALEVIVTLSETAA-------AMLRK-----HTNIVAQTIPQMLAMMAVAGESALDRMACGLG--------------------GKLVLPMIKEHIMQMLQNPDWKYRHAGLMALSAIGEGCHQQMEGILNEIVNFVLLFLQD--------PHPRVRYAACNAVGQMATDFAPGFQKKFHEKVIA-------------------ALLQTMEDQNQRVQAHAAAALINFTEDC---PKSLLIP-------YLDNLVKHLHSIMVLKLQELIQKGTKLVLE-------------------------------------------QVVTSIA------------------SVADTAEEKF-------------------------VPYYDLFMPSLK-----------------HIVENAV-ELRLLRGKTIECISLIGLAVGKE----KFMQDASDVMQLLLKTQTDFNDME--------------------------DDPQISYMISAWARMCKILGKEFQQYLPVV--MGPLMKTAS | |||||||||||||
3 | 6xe6A | 0.06 | 0.05 | 0.78 | 0.59 | DisCoVER | -KSYAALIADWPVVVLIVVCALVGPLLGFEPRGTAIGQRLVTWNNM-DRYSRV-VFG-IEKLVMCYT---------------KSMFITLMTMFAIISSLIVSYFLYRVVFHFEFFP--------------FMNLTALIILVGIGA--DD---AFVL-CDVWNYTKFDKPHA-ETSETVSITLQHA---ALSMFV-TSFTTAAAFYAN-YVS----------------NITA----IRC---------FGVYAGTAILVNYVLMVTW-LPAVVVLHSRIFFEKVLPCIVI----KFRYLWL-------FLALTVGGAYIVCINP--K---MKLPSLELSEFQVFRSSHPFERYDAEYKKMPITVIWGVSPEDN-------GNPLNPKSKGKLTFNIASPASQ-DEQDFTSCFI-KTP-GPRFDINDT--------IR--AV--VL-EFQSTYLFTLAYEKMHQFYEFYDLQDSLSDGTLIAMGLSVAVAFSVMLL-------TTWNIIISLYAIISIGTIFVT-VGSLV---LLGWELNVLESVTISVAVGLSVDFAVHYMAMAATTFAGAMMMPSTVLAYTQLGTFMMLIMCISWAFATFFF-------------QCMGPQGTCGQ- | |||||||||||||
4 | 6tbuA | 0.06 | 0.05 | 0.91 | 0.57 | CEthreader | TGSAFITLMSCVAICFSLGLAYFFYAILEFEFFPYMNLLAVVVIIGIGADDVFLFLKIWHCVLTES-------------LENIMALTMRHAAASMFVTSLTTAGAF-----YASYSSSITAIKCFGIFAGTVVVTNYLLMITWLPASVSIMERLFKKSINRFCQMFEECITKSIMNYAYLWLLIFGALGASSAVIVFW-------------------------YPGLQLPEKSHFQLFVSKHPFEVYSSLKQQFWFEKPYNFKMHMHFVWGVQAVDDGDYTNPNSYGHLHYDNNFNVSSRPAQLWILDFCQSVRQQPFYKELPNCFIENLIDYMKRRCIPCCDAQFPFEPHIFEYCLPQSISNMYDTTFFRPGVAGPKFAEAFTPLLVKALVIEFESNVAYSTIYANIRQFYESVEHWFQMQLKTAPPELQGGWFTSDLKFYNVQDTLSHDTFVAICLAMAASLAVLLCFTVNILISIYAVLTVSLSIFNTVAVLILLGWQLNILESIAVSTAIGLAVDFSLHYGIHYRMSPV--KERLAATQFVLSRIIGPTVMAATTTGLAGGIMMAS------------NILPYIQIGVFLVVVMIVSWFYATFFLMSLLRVAGPQHGFLEL-- | |||||||||||||
5 | 6xe6A | 0.06 | 0.05 | 0.83 | 0.78 | EigenThreader | PVVVLGMCTMFIVVCALVGVLVNYIAILNNRERDVSHTLKLLRTCYQILHYLVMMNIYLDNFENWNTGIEFGTVYPAIAIVIVLLVMCVYTKMFAIISSLIVSYFLYRVVFHFEF------FPFMNLTALIILVGIGADDAFVLCDVWNYTKFDKPHAE----------------------TSETVSITLQHAALSMFVTSFTTAAAFYANYVS---------------NITAIRCFGVY----AGTAILVNYVLMVTWLPAVVVLHERCHKVLFAISEASRIFFE-------KVLPCIVIKFRYLWLFWFLALTVGGAYIVC----------INPKMKL------------PFERYDAEYKHGEELHMPITVIWGVSPEDNGNPLNPKSKGKLTLDSSFNIASPASQAWILHFCQKLRNQTLFTLAYEKMHQFYKEVDSWISSELSNLEFYDLQDSLSDGTLIAMGLSVAVAFSVMLLTTISLYAIISIAGTIFVTVGSLVLLGWELNVLGLSVDFAVHYGVAYRL--------APDPDRESRVGSAMAMAALTTFVAGAMMMPS----------TVLAYTQLGTF--MMLIMCISWAFATFFFQCMCRCL---GPQGTP------ | |||||||||||||
6 | 2pffB | 0.10 | 0.07 | 0.67 | 0.48 | HHpred | ---------------------------------HVLLVP----TASFFIASQ----LQEQFNKILPEP-TEGFAADDEPTTPAE------------LVGKFL-GYVS---SLVEP-----SKVGQFDQVLNL-----CL-----TE----FENCYLEGNDI------------------HALAAKLLQENDTTLVKTK----E-------LIKNYITARIM-AKRPFDKSGEGNTDDYFEELDL--YQTYHVLV-GDLIKFSAETLSELIRTTLDEKVFTQGLNILEPSNTPDKDYLLSIPISCPGVIQLAHYVVTAKLLFTPELRVTAVAIAE---TDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSI--LEDSLENNEGVPSPLSISNLT------Q---EQVQDYVNKTNSLPAGKQVGKVSGPPQ--SLYGLRKAKAPSGLDQS-RIPFERKLKFS--------------NRFLASPHSHLLVPASDLINKDLVKNNSFNAKD-------------IQIPVYDTFRVLSGSIERIVDCIIRLPVKWETTTQ-FKATHILDFGPG----------------------------------------------------- | |||||||||||||
7 | 1zrtC | 0.11 | 0.06 | 0.52 | 0.42 | MRFsearch | --WWIWGIVLAFTLVLQIVTGIVLAMHPHVDLAFASVEYIHANGASLFFLAVYIHIFRGLYY--------------GSYKAPREITWIVGMVIYLLMMGTAFMGY-------------------VLPWGQMSFWGATVITGLFGAI---------------------------------PGIGPSIQAWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHTT---GNNNPTGVELPFWPYFVIKDLFALALVLLGFFAVVAYMPNYLGHPDNYV---QANPLSTPAHIV-------PEWYFLPFYAILRAFA------------------ADVWVVIL-------------------------------------------------------------------------------------------------------------------------------------------------------------------DAKFFGVIAMFGAIAVMALAPWLDTSKSGAYRPKFRMWFWFLVLDFVVLTWVGA-------------------------YDWISLIASTYWFAYFLVILPLLGATEK------------ | |||||||||||||
8 | 6yufD | 0.13 | 0.12 | 0.95 | 1.28 | FFAS-3D | SEIQHLSVLLKVANVLNILSKVAHEIPLS--------EAVVIRIVYLFPKVSTLDNSFKTKLPNCNSSSFPLFQTLQYLFRRDFIIEESIQYYSTLFVRLIQSCSIQNLFDSEIVQSESKSTEALHSGESILSKSRHEEYRIANHIVAYLLSR---------SLKQNKTESDNSFAILTKILLEDLLNMLTETIIRQFAMNLVMTVSSKNAALDLISLIVNKVLALFDLFYFLCKGDISLENILPYNYNKDIFIISLYHSSLFLNLKFFVSLIIGF--LDSPQAINQMKTIPSILRISKSNDQSAIVRDTVLDLLGTYIMAYRETIPQIYGCIISGISDPSTIVRKRAIKQLCEVYSKLLTRSNDEEETSPASNELDCQKGYEQLTFLEKQKLRVQYFPILKLCAEPSTERHVLLVTSLKTTSKEEINLSTLHTQIRLLLSCLFNQLIEVVTETKGILYELKPYLRSASTIEEQRFLYYVVAIFRQVLPFQISESFLRSLESVLLQRLTKGTATLMEIVPCLCSLFTRL----------NDYERLKKIVVSCLKSLEEARHSENNFQKHSLDFISPKDAKGQLRIHIIDNMSRILSTLDMIIAELFKSFLELLDEDLIFEADQKLSL | |||||||||||||
9 | 3nowA | 0.08 | 0.07 | 0.87 | 0.94 | SPARKS-K | KDQDIYVNMVHLVAALCVERTKGVLTELGV--------PWFMRVLDVSTAQFCLQTILNALSGLKNKPDSKPLCTRNNREIDTLLTCLVYSIAARDGVIELITRNVHYTALE------------------WAERLVEIRG--LCRLLDVCSEL-----------EDYKYESAMDITGSSSTIASVCLARIYENMYEAKARFTDQIDEYIKDKLMESKVRVTVAITALLNGPLNQVVAREGILQMILAMATLQQRVACECLIAAGIRVRALVGLCKLGSYGAAIRPFGAALKLAEACRRFLIKPGKDIRRWAADGLAYLT-LDAECKEKLIED---------KASIHALMDLARTTFVNLC--NAYEKQEMLPEMIELAKFAKQHIP---EEHEL-----------DDVDFINKRITVLANECALAKTESHNSQELIARVLNAVCKELRGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITINPEVSFSGQRSLDIRPLLNLLQQCTALENFESLMALTNLAQRIIKE----QGVSKIEYYLMLTRAAAQCLCNLV---------------MSEDVIKMFEGNNDRVKFLALLCEGALAIITSVSVKCCEKILAIASWLDILH | |||||||||||||
10 | 6xteA | 0.07 | 0.06 | 0.92 | 1.51 | CNFpred | GFLQAVNDSCYDDSVLKSLVEIADTVPKYLRPHLEATLQLSLKLCRQLALEVIVTLSETAAAMLHTNIVAQTIPQMLAMMNAVAGESALDRMACGLGGKLVLPMIKEH--IMQMLQNP------DWKYRHAGLMALSAIGEGC-ILNEIVNFVLFLQDPHPRV------------RYAACNAVGQMATDFAPGFQKKFHEKVIAALLQTME-QRVQAHAAAALINFTEDCPKSLLIP---YLDNLVKHLHSIMVLKLQ-KLVLEQVVTSIASVADTA----EEKFVPYYDLFMPSLKHIVENALRLLRGKTIECISLIGLAVKEKFMQDASD-------VMQLLLKT-ISYMISAWARMCKILGKEFQQYLPVVMGPLMKTASIKPEVALLDTQDMENMSDDDGWEFVNLGDQQSFGIKTAGLEEKST---ACQMLVCYAKELKEGFVE--YTEQVVKLMVPLLKFYFHDGVRVAAAESMPLLLECAGPEYLTQMWHFMCDALIKAIGEPDSDVLSEIMHSFAKCIEVMGDGCL----NEHFEELGGILKAKLEEHFKNQELRQ----VKRQDEDYDEQVEESLQDEDDNDVYILTKVSDILHSIFSSYKKVLPWFELLPLIVNLIM | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |