>PF09529 (215 residues) YGPSHLVVLAIFAVGAVLLVWIGRRQSEAQARVLGRVLAVLLIAAYAVALVYKLIRPDIQ TSVPLQLCDVAELAAAYALWSQRHWAFALAYYWGLLLSSQALITPDVGTPAEGAPDFPHH LFLTFFTLHVLVVWAAIYLTWGQRNRPSWRDYRFTVGVTFLWAAFTFIFNAITGTNYGYL NRKPPTASVLDVLGPWPIYLLTEIAIVLAVWALMT |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | YGPSHLVVLAIFAVGAVLLVWIGRRQSEAQARVLGRVLAVLLIAAYAVALVYKLIRPDIQTSVPLQLCDVAELAAAYALWSQRHWAFALAYYWGLLLSSQALITPDVGTPAEGAPDFPHHLFLTFFTLHVLVVWAAIYLTWGQRNRPSWRDYRFTVGVTFLWAAFTFIFNAITGTNYGYLNRKPPTASVLDVLGPWPIYLLTEIAIVLAVWALMT | |||||||||||||||||||
1 | 1xioA | 0.08 | 0.07 | 0.93 | 1.00 | SPARKS-K | LESLLHWIYVAGMTIGALHFWSLSRNPRGVPQYEYLVAMFIPIWSGLAYMAMAIDI-AHYARYIDWMVTTPLLLLSLSWTAKDWTLIGFLMSTQIVVITSGLIADLSERD---------WVRYLWYICGVCAFLIILWGIWRAKTRTQSSELANLYDKLVTYFTVLWIGYPIVWIIG------PSGFGWINQTIDTFLFCLLPFFSKVGFSFLDL | |||||||||||||
2 | 3rkoB | 0.14 | 0.13 | 0.95 | 1.19 | CNFpred | --MWATLMLLGGAVGKSAQTWLADAMGPTPVSALIHAATMVTAGVYLIARTHGLFLMTVLHLVG-IVGAVTLLLAGFAALVQIKRVLAYSTMSQIGYMFLALGVQ--------AWDAAIFHLMTHAFFKALLFLASGSVILACMGGLRKSIPLVYLCFLVGGAALSALTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHG | |||||||||||||
3 | 6gs1A1 | 0.07 | 0.04 | 0.57 | 0.67 | DisCoVER | -----------AFYLIFSIE--LWER----F----------------------------GYYGLGIMVYGLVAIGGWLG------DKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMAAIAVGNGLFKANPSSLSVNI------------------------GSFFS-MIATPLASVAFALSVVG--------------LL-ITIVNF- | |||||||||||||
4 | 6d9fA | 0.07 | 0.07 | 0.90 | 0.83 | DEthreader | ---DSAPGLEGAMT-LDLTPEQC----PDIVELEFFTTQLVDEARHSMVFRRHLLVSIAEVSAYRVL--ILDFAL-TVR-GDFVGGVAVFTIIIEGVLAPAAELSERKWLLDPAAG--AIARGAAID-EVRHLTVGSSVVRRHRRPRKAALLDIVRRGREIWDGIPD--RK---HVLRREELFQMVWP--TTPEQRYAMAEQWTDRMAAARLVHG | |||||||||||||
5 | 6i9kA | 0.06 | 0.06 | 0.99 | 0.36 | CEthreader | IIVIGIISVSGNGVVMYLMMTVKNLRT---PGNFLVLNLALSDFGMLFFMMPTMSINCFAETWVYGMIGSLFGSASIWSLVGALLRMLFVWIWSLGWTIAPMYGWSRYVPETIDYIDTAINPMSYLIAYAIFVYFVPLFIIIYAKKMNNEDNKKASAEFRLAKVAFMTICCWFMAWTPYLTLSFLGIFSDRTWLTPMTSVWGAIFAKASACYNPI | |||||||||||||
6 | 3frrA | 0.10 | 0.07 | 0.64 | 0.73 | EigenThreader | GSG----------------------FKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAAMEILELYCDLLLARLDAESVSTLIWAAPRLQS----------------------------EVAELKIVADQLCAKYSKEYGKLCRTRLMHKLILVERYLIEIAKNYNVPYE-----PDSVVMAEA----------------------- | |||||||||||||
7 | 5tj5A | 0.11 | 0.07 | 0.67 | 0.31 | HHpred | ------------------------------------------------------------VTFPFMFAGFLMTLAALSLVLNEKKIFDMAFLMGVFSMYTGFLYNGTE-----N----ALLFSNSYKMKLSILMGFIHMTYANHLDIIGNFIPGLLFMIFGYLSVCIVYKWAVDWVNMFLSPGTIDDELYPHQAKVQVFLLLMALVCIPWLLLV- | |||||||||||||
8 | 5ezmA | 0.13 | 0.12 | 0.89 | 0.22 | MRFsearch | --TKGLVGIALPGLVLVVYTLVTRDWGLWRRLHLALGVVVMLVITVPWFYLVSVRNPSVFYFLPLVLPWAGIFPKLWTAMRARFRPALMAGIWAIAIFVFFSISRS------------KLPGYIVPVIPALGILAGVALDRLSPRSWGKQLIGMAIVAACGLLASPVVATLN---------ANHIPNSFYRAYAVWVAVAFVVMLLGIAVARLLL | |||||||||||||
9 | 6nwfA | 0.12 | 0.10 | 0.85 | 0.87 | FFAS-3D | -QAWLWIGVISMALGSVFFGFGAHNAKNERWQILYTLNFFICLIAAGLYLAMAVRFVTWFCSTPL------LLLDLTFLGRTSLPLTGSLLGANAYMLVTGFVATVTPKP---------MSYIWYIVSCAAYLAIVYLLAAAERKHPRSKQAFRTLVTVHLVLWTLYPIVWILSPEMFY--------TLLD--------IASKVGFGFLSLNTL- | |||||||||||||
10 | 6nwfA | 0.12 | 0.11 | 0.90 | 0.97 | SPARKS-K | TQAWLWIGVISMALGSVFFGFGAHNAKNERWQILYTLNFFICLIAAGLYLAMAINGRPTYWVRFVTSTPLLLLDLTFLGRT-SLPLTGSLLGANAYMLVTGFVATVTPKPM----------SYIWYIVSCAAYLAIVYLLAQPYRIASKQAFRTLVTVHLVLWTLYPIVWILS----------PEGFSTFTQGSETMFYTLLDIASKVGFGFLSL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |