Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | TPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISRMVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGKNAVQTLFKNQ |
1 | 6yacA | 0.01 | 0.01 | 0.89 | 1.00 | DEthreader | | ---------LAMLGSLTIIVAHHMYAAVALLPIPL-GTA-DFLVHHIHAFTIHVTVLILLKGVLFARSKLRFSAWDHVFLGLFWMYNAI-SVVIFHFSWKMSTGNFAQSSGRD |
2 | 1yewC | 0.04 | 0.04 | 0.93 | 1.17 | DEthreader | | -------EIVEIVTASIWGYLWKTRDRLLTPRE-LRRNFTHLVWLVAYAWAIYWGASFTEQDGTWHQTIVRDTFTPSHIIEYLSYPIYIITGFAAFIYAKTLPFFPLHYGFVI |
3 | 1uk5A | 0.10 | 0.07 | 0.73 | 0.58 | DisCoVER | | --PKHGVLKVEAILE-KVQGLEQAVDSFEGKK----TDKKYLMIEEYLTKELLALDSV---DP-----------EGRADVRQARRDGVRKVQTILEKLEQKA-SG-------- |
4 | 1jb0A2 | 0.03 | 0.03 | 0.89 | 1.00 | DEthreader | | ---------LAMMGSLSIIVAQHMYAAVAM-MPIVLGTA-DFMVHHIHAFTIHVTVLILLKGVLFARSKLRFSGWDHVFLGLFWMYNCI-SVVIFHFSWKMSTGNFAQSAGRD |
5 | 1sj8A1 | 0.14 | 0.14 | 1.00 | 0.48 | CEthreader | | QQALTGTINSSMQAVQAAQATLDDFETLPPLGQDAASKAWRKNKMDESKHEIHSQVDAITAGTASVAETDYTAVGCAVTTISSNLTEMSRGVKLLAALLEDEGGNGRPLLQAA |
6 | 2ficB | 0.10 | 0.10 | 1.00 | 0.62 | EigenThreader | | VYEPDWPGRDEANKIAENYHQKLVDQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNT |
7 | 2g0uA | 0.15 | 0.12 | 0.75 | 0.42 | HHpred | | ---------------------MSN--PPTPLLADYEWSGYLTGIGRAFDDGVKDLNKQLQDAQANKNPSDPTALA----NYQMIMSEYNLYRNAQSSAVKSMKDIDSSILEH- |
8 | 3i9wA | 0.10 | 0.09 | 0.88 | 0.37 | MRFsearch | | -----------MNMARQLSEASAWELFAAQNLTSADNEKMWQAQGRMLTAQSLKINALLQALREQG--FDTTAIEQQEQEISRSLRQQGELVGQRLQLRQQQQQLSQQIVAAA |
9 | 5tptA2 | 0.23 | 0.19 | 0.82 | 0.74 | FFAS-3D | | -----------RMALENYLAALQSD---PPRPHR--ILQALRRYVRAENKDRLHTIRHYQHVLA----VDPEKAAQMKSQVMTHLHVIEERRNQSLSVAQEIQEEIDELLQEQ |
10 | 6w2wA2 | 0.05 | 0.04 | 0.94 | 0.71 | SPARKS-K | | -------ENEAAKECLKAVRAALEAALLALLLLAKHPGSQAAQDAVQLATAALRAVEAACQLAKQYPNSDAKKCIKAASEAAEEASKAAEEAQRARDEIKEASQKAEEVKERC |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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