>PF09484 (596 residues) IEAVARIGKQRIGEHAQSGCEDILYYIVENPNLNGGYNHALVVTLEEKDGDFSYRGVELE ELKDYRRYLYKGKKGNATDATPTCKIAKDIEKTFEKKFLRWFDGIDSSDLSGEERATLKN IKNVLFSNKDKIFKELQEKRSHLKQRENCIITLGFVKDGDLKYLADYPAFRNVLLKNSCD RFFRKYGGESRGTDALCSVCKEQKDEVYAYAIPWPFHTFDKPGFIAGGFRQSDAWKNTPV CLNCAINLDAGKKYIEESLDFSFYGFRYLLIPKLIIGDDYQEILDILSGMKKELKMSRKT RNRITDDEDEILDMVKDQKDFFSNSLMFYKKDNSAYRILLHIDGILPSRLRRLFEAKERV EGAFGIYNEMVLSEDKGRLIFDFGVLRRFFPRESGNVTHDKMFLEIVNRIFVGRYVDRHL LISFMMKRIRDDFVHGRSTLMNTLNGFMLLHYLKELNLLKDLEVDRMSGIVLKREELEAL PLDKRVERFFEANREFFDSDAKKATFLEGVLVQKLLNIQWMEKNAKPFYTKLHGLKMNEA LIKRLLPEIQNKLEEYEKNYYRELEAIIAEHFVLSGRGWKETDDELSFYFVLGMNL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | IEAVARIGKQRIGEHAQSGCEDILYYIVENPNLNGGYNHALVVTLEEKDGDFSYRGVELEELKDYRRYLYKGKKGNATDATPTCKIAKDIEKTFEKKFLRWFDGIDSSDLSGEERATLKNIKNVLFSNKDKIFKELQEKRSHLKQRENCIITLGFVKDGDLKYLADYPAFRNVLLKNSCDRFFRKYGGESRGTDALCSVCKEQKDEVYAYAIPWPFHTFDKPGFIAGGFRQSDAWKNTPVCLNCAINLDAGKKYIEESLDFSFYGFRYLLIPKLIIGDDYQEILDILSGMKKELKMSRKTRNRITDDEDEILDMVKDQKDFFSNSLMFYKKDNSAYRILLHIDGILPSRLRRLFEAKERVEGAFGIYNEMVLSEDKGRLIFDFGVLRRFFPRESGNVTHDKMFLEIVNRIFVGRYVDRHLLISFMMKRIRDDFVHGRSTLMNTLNGFMLLHYLKELNLLKDLEVDRMSGIVLKREELEALPLDKRVERFFEANREFFDSDAKKATFLEGVLVQKLLNIQWMEKNAKPFYTKLHGLKMNEALIKRLLPEIQNKLEEYEKNYYRELEAIIAEHFVLSGRGWKETDDELSFYFVLGMNL | |||||||||||||||||||
1 | 1vt4I | 0.07 | 0.06 | 0.83 | 0.71 | DisCoVER | GGGGGGG--G---------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGG-GG---GG-GG--GGGG--GGGGG--GGGGG--G---G--GG-GGG--GG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GG---GGGGGGGGGGGGGGGGGGGG-G--GGGGGGGG--GGGGGG--GGGGGGGG--G--GG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGG-GGGGGGGGGGGGGGGGG--GG-GGG-GGGGGGGGGGGGGGGGGGGG---------GG--GGGGGGGGGGGGGGG-GGGGGGGGGGGGGG--GG-----GGGGG-GGGGGGGGG-GG-GGG-GGG-GGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGG- | |||||||||||||
2 | 1llwA | 0.06 | 0.04 | 0.63 | 0.67 | DEthreader | --------------------------CGV------------GFIANLRGKPDHTLVEQALKA----MEHRGGCDNDSGDGAGV--------VNSDVL--KQPHIEQIYVCSFSCRTIVYKLG--YLDLKNPGY-------------------T-SNF----AVYHRPMLLGHNGEANSDSYNLDSALELAAMIPEAYK----SGQEPWDGPAL-D-NGL------GSEAGRLAPGQM---------QRFAQVTNPPIDPLRENLVMSKM------KRFCTGGMSLGALS-------------------SGEGGEDRLANSAIKQIASG----------PEYLMSGYIAMLRRSKPGVTL-S------------------DLAQLIYD---LYRLVNTDRTVGTRLSGAIAKGNNFGNITLGTLHLQGEAVPHPQASFAPEDNVIIGNTCLYGA--TGGN------LYAN-------------------FAVRNSV-G--K-AVIEGIVVLGPVFLDEVGDLP-EK------------------------------LQRITASKGEEQLKSLITAHVE---H--TGSPKGKAILANW | |||||||||||||
3 | 4hnwA | 0.07 | 0.07 | 0.97 | 0.79 | CEthreader | ENDQFLEALKLYEGKQYKKSLKLLDAILKKDGSHVDSLALKGLDLYSVGEKDDAASYVANAIRKIESASPICCHVLGIYMRNTKE---------YKESIKWFTAALNNGSTNKQIYRDLATLQSQIGDFKNALVSRKKYWEAFLGYRANWTSLAVAQDVNGERQQAINTLSQFEKLAEGKISDSEKYEHSECLMYKNDIMYKAASDNQDKLQNVLKHLND---IEPCVFDKFGLLERKATIYMKLGQLKDASIVYRTLIKRNPDNFKYYKLLEVSLGIQ-GDNKLKKALYGKLEQFYPRCEPPKFIPLTFLQDKEELSKKLREYVLPQLERG-----VPATFSNVKPLYQRRKSKVSPLLEKIVLDYLSGLDPTQDPIPFIWTNYYLSQHFLFLKDFPKAQEYIDAALDHT-PTLVEFYILKARILKHLGLMDTAAGILEEGRQLDLQDRFINCKTVKYFLRANNIDKAVEVASLFTKNDDSVNGIKDLHLVEASWFIVEQAEAYYRLYLDRKKKLDDLASEQIANDIKENQWLVRKYKGLALKRFNAIPKFYKQFEDDQMRKGTPRAYLEMLEWGKALYTKPMYVRAMKEASKLY | |||||||||||||
4 | 5f0oA | 0.06 | 0.05 | 0.90 | 0.67 | EigenThreader | GVRAFAACCLSDILRLYAPDTYLINNLLEYRSIVILTDL-----------------------PSSSLF---NIFYSPTNSTIQECDSLPMSALKMVFNKKRAESLDGIPGFEISLIICQTYSNRLGRHFIKFYSEIMYEVL-GEASSAY------------------KTLVKIGNLTSELWKYAGSVTGLLYQLLCSDNELFRESATKCVSKMLGTHSLINFAVAHSDTYKIWLSKMADISPHVRQAWVDDISKGLAKALIDSDHTVRLSAIQTFHEVPVKRLWECLLVHLTRETRRDLRDECIDAVARIYTESIESIPKT---------NENKEIWGVVETLQGFNNRRQDQMSTVLWKFIEFCEETNSQSPAASLSDTKLIKTVEWISSGFPSHLNVEQILLAFRLIKVAVAESKHLTVRNAVSELFKRLRKKRFTRDNFSTVFRVLIYRAA---PIIFNTTLSLAEAMRTVYKISKTFFFQKLEDYAKEGNPLEAKYAIKLLGNVLVLAEITKMQQLLEKDSTEIDIYTGKADALSAKVFSLKLFANKIKVM---AMTHAFTERTLKLFFYLVASGGELVKLRCCAGLHILKI | |||||||||||||
5 | 1vt4I | 0.11 | 0.09 | 0.78 | 0.58 | HHpred | -----ETGEHQYQYK------DILSVFVDNPKSKEEIDHIIMSKDAVSGTLLFWQEEMVQKFVEELRINYKFLM------SPIKTEQRSMMMYIEQRDRLYNDNQVFKYNVSRLQPYLKLRQALLEDSGK-TWVALDVCVQCMD---FKIFWLNLKIDPNWTSRSDHSSNIKLRIHSIQAELRRLL---KSKPYENCLLV-----------------------L--LNVQNAKAWNAFNLSILLTTRFKQVTDFLSAATTTHI-----S-LDHHSMTLTPDEVKSLLKYLDRPQDLP---REVLTTNPRRLSIIAESIRDG-----------LATW---DNWKHVNCDKLTTIIESSLNVLEPAKMFDRLSFPPAIPTILLSLIVLYSLVEKQPKTISIPSIYLELKVKLENEYALHRSIVDHYFYSHIGHHLKNIEPERMTLFRMFLDFRFLEQKRHDSTAWNAGSI-----------L-NTLQQLKFYKPYI--C-DNDPKYERLVNAILDFLPKIE-ENLSKYTDLLRIALMAEDEAIFEEAHKQVQR--------------------------------------------- | |||||||||||||
6 | 4xdnA | 0.12 | 0.07 | 0.56 | 0.68 | MRFsearch | -----------------------------------------------------------------------------------------IPEDALQELRSTE--LHTVGPELYAWKLALEMVIQLCKNITDHLNEFKNFFDTNKQNEGKGCVIKIMP--RIALKVELPMIFH------------------------------------------------------------------YKELKNILLLLQSVSYIVNCYD-----EKGNFSRK-----FLPKVYSTTQKLIKNIAAGGVSMNELDSRIQTYKS--------ILEFCEFYK-------VWEQTLLPSPGYVRLLQAMKVQFEGAVEEYTRLA--------------------------SSEVKMISLLNCYTVQAQGELVEQCNKVWLQVEKLLQETLQFNPIWECTVTILWLFSHFEPFSWNPLP---------------CSDKQRAEYVSKLREFYSSKALLLQILVNYLGGRMCRQQGGM--------------RKVQYVIGIWHLMNCTVAGKDVALTNAKLEALVKQITS---------------------- | |||||||||||||
7 | 5o9zG | 0.06 | 0.05 | 0.88 | 0.98 | FFAS-3D | PPAWIASARLEEVTGKLQVARNLIMKGTEMCPKS---------------EDVWLEAARLQPGDTAKAVVAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVELEEPEDARIMLSRAVEETYENARKVLNKARENIPTDRHI-----------------WITAAKLEEAKIIDRAITSLRANGVEINREQWIQGSVATCQAVMRAVIG--------IGIEEEDRKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKPAARSILAL----------AFQANPNSEEIW--------LAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEW-------VQDNIRAAQDLCEEALRHYEDFPKLWMMKGAREAYNQGLKKCPHSTPLWLLLSRLRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLERTKSVDALKKCEHDPHVVAKLFWSQRKITKAREWFHRTVKFYKFELQHTEEQQEEVRKRCE-------SAEPRHGELWCAVSKDI | |||||||||||||
8 | 4fyeA | 0.12 | 0.11 | 0.89 | 0.73 | SPARKS-K | ---------------ITENIETYVTHLLSEPVPSQNQH----LAYGYPGERQVFKD----PMLDGKQVVVVNKHGRPVTGQPVIQEANNYIDNLVAAAKSLIDKDKKGEKDKDFLEQLAKVEGSLQQFTQAVAKASDKEGHNIRSHNRDTLIHRFSKEGEEQFIMYIPCYT-----KRQQRLMGKDESDLVLGNRMIAGTRHSDGTV---TIHHDSFSGPGARMPYSDFKGADDYKKLAIKAVTLINQEEVIQTLAQRQIDRMTNEDLWKIPRPLPPDAEKARAQLIKLYVEHNRVAAENQKEQFEYVRQMMDAFTEVETAVGYQARMSSSDNSVTKVNQMTDDVIYDKAGALHTLLNALKEVKGAYREALFSKGEGKWDQALDQLKNQVDGYEKSKKQESAIYELHNQIDALRKYQINKALQELKEQISPVIQNKETRLQHFYNSCAYLTQAQELYYENTWHHGKNNF---------------KLQTLMASLSCELDSNNDRGQRLAQKIVGNALWTAM----SEDFLDHTHGKEVSN--VEQLDRELT-------------TIQALHHTANTSGGKFEIQDKANLFGKVANFAK | |||||||||||||
9 | 3nd2A | 0.07 | 0.05 | 0.71 | 0.99 | CNFpred | ------------------------------------------------------------------------------------------TQQFAQRWITQVS-------PEAKNQIKTNALTALVSIEPRIANAAAQLIA-------AIADIELPH--------AWPELMKIMVDNTGAEQPENVKRAS---LALGYMCESADPQSQALVSSSNNILIAIVQGAQSTET------SKAVRLAALNALADSLIFIKNNMEEGERNYLMQVVCEATQAEVQAAAFGCLCKIMSLYYTMKPYMEQ--ALYALTIATMKSPNDKVASMTVE----------------FWSTICEEEIDIAYELAQ-YNFALSSI--------KDVVPNLLNLLTRQNDDWNVSMSAGACLQLFAQNC---GNHILEPVLEFVEQNITA-DNWRNREAAVMAFGSIMDGPDK---------------------VQRTYYVHQALPSILNLMNDVKETTAWCIGRIADSVAESIDPQQHLPGVVQACLGLQDHPKVATNCSWTIINLVEQLAEAPIYNFYPALVDGLIGAANR-IDNEFNARASAFSALTT | |||||||||||||
10 | 7khaI | 0.08 | 0.05 | 0.54 | 0.67 | DEthreader | --------------------------ENTSYI-G--------------------------------------DAK-----------------------------------------------------------------------------------------------------------------------------------------GKQER-------CHAAFIAHIKAYCDTADQEAAFSYVTALNYL-RQKVTIA-DATVVF-W----------AERSS-PAE-DIFAGM--VAIRSG-ATDIMPDMDE-SV-RFH-VLGLSPNA-ARLSVRFWEVDTVHMLDKVGRHYRELE-IIP-Q--FNN----EQEFPSLSTLLRQTAVLNKTENISPVLGGLFRAMLTGGPYPQ-SLLPAVLGRIRAEHARPKRLEVVTYYRAALIKAYL--IRN-RKLE--V-------------------VSLDP--A--RTDRPYLLGRLFAVLEKAQEDAVP---GAT--IKDRYLASANPQVFHMLLKNASNHTAKLRAIHYEIMMQEIIDN-ISDFPVTMSSEQGLFMIGYYHQRK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |