>PF09462 (640 residues) LESGWHWLFTTLPLGEIDALGIARIGSRFSETCNNWKIVKQLLCPVLESYEPNTSASISY NTYCRALFHRCFHLINGWGWRDCKLILDTLYDFFARNTLYNLKQEENYTSPSFLDELDHN PSLDVTPSDPCFHIFLKIIASGLRSLSKRYDKKKVRNFAWRLLPNHGRVYPKEQPIHQAD LDALRNHHDLLCTLYFAVPDGCRPRLEAIKNLVHPANSHRETCNISIRSWARLVRFKLST DEDVSGLEAFADWHSYFVSEFIKQHMLARREIEAQNTKDNQFSHQLIERTISQNQRQIES LLKTALNSLQNAIQSAPTLEHAHRLISKSPISVVLGLFDPRLARVNTTVSEALQMLKAYV QKCSSASATGSANPPAPVDEDSQEYGDWADIEAMYGDEFSLATHPQGIEYMEKVLHPAVS QLVSNSFGEDHCPEDAILLNVVDCWTSIAQVLVKNGFRHWDNYLSLYDGDSWAVLRKTAQ TRKFTPKFLASCIEKDARFMCECKMQVLGMWMSSLVERVSMLKFQHSLTEALLNCDSNNT LLQNLPFSADRKDGRYSITLEQLSQRRLSLISSLLSNMRAHVQDLEITASRALSTEKQEY RELIQTMMSSMKANYQELGSSAASAQGAYVDFVHRVVGFL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | LESGWHWLFTTLPLGEIDALGIARIGSRFSETCNNWKIVKQLLCPVLESYEPNTSASISYNTYCRALFHRCFHLINGWGWRDCKLILDTLYDFFARNTLYNLKQEENYTSPSFLDELDHNPSLDVTPSDPCFHIFLKIIASGLRSLSKRYDKKKVRNFAWRLLPNHGRVYPKEQPIHQADLDALRNHHDLLCTLYFAVPDGCRPRLEAIKNLVHPANSHRETCNISIRSWARLVRFKLSTDEDVSGLEAFADWHSYFVSEFIKQHMLARREIEAQNTKDNQFSHQLIERTISQNQRQIESLLKTALNSLQNAIQSAPTLEHAHRLISKSPISVVLGLFDPRLARVNTTVSEALQMLKAYVQKCSSASATGSANPPAPVDEDSQEYGDWADIEAMYGDEFSLATHPQGIEYMEKVLHPAVSQLVSNSFGEDHCPEDAILLNVVDCWTSIAQVLVKNGFRHWDNYLSLYDGDSWAVLRKTAQTRKFTPKFLASCIEKDARFMCECKMQVLGMWMSSLVERVSMLKFQHSLTEALLNCDSNNTLLQNLPFSADRKDGRYSITLEQLSQRRLSLISSLLSNMRAHVQDLEITASRALSTEKQEYRELIQTMMSSMKANYQELGSSAASAQGAYVDFVHRVVGFL | |||||||||||||||||||
1 | 6xteA | 0.08 | 0.07 | 0.99 | 1.05 | CEthreader | ALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQEHPSIRTLSARATAAFILANEHNVALFKHFADLLPGFLQAVNDSCYQNDDSVLKSLVEIADTVPKYSLNNMQRQLALEVIVTLSETAAAMLRKHTNIVAQTIPQMLAMMVDLEDFDSNAVAGESALDRMACGLGGKLVLPMLQNPDWKYRHAGLMALSAIGEGCHQQMEGILNEIVNFVLLQDPHPRVRYAACNAVGQMATDF-APGFQKKFHEKVIAALLQTMEDQ-GNQRVQAHAAAALINFTEDCPKSLLIPYLDNLVKHLHSIMVLKLQELIQKGT--KLVLEQVVTSIASVADTAEEKFVPYYDLFMPSLKHIVENAVQKELRLLRGKTIECISLIGLAVGKEKFMQDASDVMQLLLKTQTDFPQISYMISAWARMCKILGKEFQQYLPVVMGPLMKTASIKPEVALLDTQDMENMSDDDGWEFVNLGDQQSFGIKTAGLEEKSTACQMLVCYAKELKEGFVEYTEQVVKLMVPLLKFHDGVRVAAAESMPLLLECARVRGPEYLTQMWHFMCDALIKAIGTEPDSDVLSEIMHSFAKCIEVMGDGCLNNEHFEELGGILKAKLEEHFKNQELRQVKRQDEDYDEQVEESLQDEDDNDVYI | |||||||||||||
2 | 3a6pA | 0.09 | 0.08 | 0.88 | 1.03 | EigenThreader | KYLRASMTNLVKMGFPSKTDSPSCEYSRFDFDSDEDFNAFFNSSRAQQGEVMRLACRLDPKTSFQMAGEWLKYQLS---TFSLVQWEAMTLFLESVITQMFRTLNREEIPVNDGIELLQMVLNFDTKDPLILSCVLTNVSALFPFVTYRPEFLPQVFSKLFSSVTFETVEESKAPRTRAVRNVRRHACSSIIKMCRDYPQLVLPNFDMLYNHVKQLLSNMEKCALMEALVLISNQFK--------NYERQKVFLEELMAPVASIWLSQDMHRVLSDQKDPGLED------PCGLNRARMSFCVYSILGVVKRTCWPTDLEEAKAG-------------------GLKLLDNLLALIRTHNTL-----YAPEMLAKMAEPFTKALDMLDAEKSAILGLPQPLLELMQRFFSTLYENCFHILGKAGPSMQQDFYTVTQLLSSARPMLRVFVKPLVLFYEALVSPILGPLFTYLHMRLSQKWQVINQVMDLITVCCVDLGKCLMKHEDVCTALLITAFNSLTLSCQRTTSQLCWPLLKQVLADAVTWLFTSVLKGLQMHGQHDGCMASLVHLAFQIYEALRAVME----QIPEIQKDSLDQFDCKL----------------LNP------------------ | |||||||||||||
3 | 2x1gF | 0.09 | 0.08 | 0.89 | 1.47 | FFAS-3D | -ELAESCLKTMVNIIIQPDCHNYPK--------TAFVLIKMFLDSLSEITKTEWKRENDNEDIIVHIYMLFVSSVERHSTILVHRIVQEILHCTDKPGI-------------------------YPVEESCSTMALAFWYMLQDEVFAHKCWEYIKPLYAHLTRSEQPDEKSLAKWSSDDLECFRCRQDISDTFMYCYDVLNDYILEILAAMLDEAIAKLEACIYSFQSIPRLMRVLAEIPYEKLNLGTALETMGSYCNWLMYIPPAINLLVRGLNSSMSAQATLGLKELCRDCQLQLKPYADPLLNACHASLNTGRMKNSDSVRL-MFSIGKLMSLLRPE-----EIPKYLDIIVSPCFEELQAICQ----------ATPAARIRTIFRLNMISTNTPVLLVMQRTMPIFKRIAEEAACSAMKHAITRSQPMLQDLCLFIVASTLEISKTAIVMFFKPLQHSFKLFESTPEQNFSNISDTMETFFGCLTQIIKKIPQVLEDKTLRLVFYAQRGMLPESGAIRNSIQFLTHFVMQSRNHAHV-----------------TEVVLATGEQTLYTAMMCVRSQVDKFADILLAMNRKYAAEMAVWMKSLMADKTRYTALIIKEKVNKR-LLQQHLSEMA--- | |||||||||||||
4 | 3nowA | 0.10 | 0.08 | 0.87 | 1.06 | SPARKS-K | CVSTAQFCLQTILNALSGLKN--KPDSKPDKELRNNREIDTLLTCLVYSITDRTISGAARDGVIELITRNAERLVEI-------RGLCRLLDVCSELE-------------------DYKYESAMDITGSSSTIASVCLARIYENMYYDEAKARFTDQIDEYIKLLAP--------DMESKVRVTVAITALLVGNQVVARE--GILQMILAMATTDD--ELQQRVACECLIAAS----SKKDKAKALEQGVDILKRLYNDGIRVRALVGLCKLGSYAAIRPFGDGAALKLAEACRRFLIKIRRWAADGLAYLT---LDAECKEKLIEDKASIHALMDLARGGN--QSCLYGVVTTFVNLC-----NAYEKQEMLPEMIELAKFAKQHI-------PEEHELDDVDFINKRITVLANEGITTALCALAK---TESHNSQELIARVLNAVCGKVVQEGGVALLRMALEG----------TEKGKRHATQALARIGITIEVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQ--------GVSKIEYYLMYLTRAAAQCLCNLVIKMFEGNNDRVKFLALLCEETATACAGALAIITSVSVKAIASWLDILHTLIPAVQHRG | |||||||||||||
5 | 4jlqA | 0.10 | 0.09 | 0.84 | 1.62 | CNFpred | -----IRSHAVACVNQFI---------------SRTQALMLHIDSFIENLFAGDEEPEVRKNVCRALVMLLEVRMDRLL-PHMHNIVEYMLQRTQD--DENVA----LEACEFWLTLAEQPICKD----VLVRHLPKLIPVLVNGMKY-NLRKCSAAALDVLANVYDELLPHILPLLKELLFHWVVKESGILVLGAIAMQGMIPYLPELIPHLIQCDKKALVRSITCWTLSRYAHWVVSQ-----------TYLKPLMTELLKRILDSNKRVQEAA-------CSAFATLEEEACTELVPYLAYILDTLVFAFSKYQ-HKNLLILYD--AIGTLADSVGHHLNK-PEYIQMLMPPLIQKWNMLKD-----EDKDLFP-------LECLSSVATALQSGF-----LPYCEPVYQRCVNLVQKTLAQAMLNYEAPDKDFMIVALDLLSGLAEGLG----GNIEQLVARSNTLMYQCMQDMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPFISVCNNATWAIGEISIQM-IPMVLHQLVEII-----NRPNTPKTLLENTAITIGRLGYVCPQEVAP--------------MLQQFIRPWCTSLRNIR------DNEEKDSAFRGICTMISVN | |||||||||||||
6 | 5vchA | 0.09 | 0.07 | 0.82 | 1.03 | EigenThreader | PALTALRLISNASGELSPSQVGVPIIEHLPTLSSSNPFERRSILLAISVLVTG-----SPDYTLSQFDKIIPATVTGLKDSEAVVQLAALKCIVQLSTNLQDEVARYLALDGLLEFIALNKLFQLETQQSPKLRAAIVSAIGSCAFAAGSGFVPYFKTSVQYLQQFIQNVSQIEGLSEDDIELKALTFENIST------GRAVKEYAEPLVNAAYEAIKTRLRESGYAFIAN----------AKVYGKDFAPFLQTIIPEIFKTLEQ-----------EEYTVN--------TGIAYEKEVAAAALSELAI-----ASKEHFL----EYVEPSLKVLAEQVNESLKETALHSWAIVKAVLLTA-------NLKEGEYPKGVPSGSYVD-----------------------ASALAVIQTVREVSLNNVIEEVEFQDLSEHLDQLCREALSVLKGEHACQ------TILDAS------ETEATLLDVALDIYVALSTNLVGGFAQVFTTAKPVILQLCKNKRSFAVGALSEIALGRDENEALIISLTNDKS--------LEVRCNASYGVGLLIEYS-------------SFDVSAIYSPVLKSLYEILSVADEKNLATEDDEATKEIVDRTFSNVCGCV | |||||||||||||
7 | 3icqT | 0.09 | 0.08 | 0.95 | 1.44 | FFAS-3D | AQDVENAVEAALDIGSLRSSSIFSEKTKYKPSTEWNNMIRDSVWSYIKELSFLDEPAYISNAVQHLL---TLLFLQLYNWND---FFASLQGVIAASSQDEIADSLVLKTDEMMLAYSNAKNYGTVGLCQVYAQWVPCMNLLYSFLQIEELRCAACETMTEIVNKKMKPLSSTDPNFDEHVAKLINAQGVELVAIKSDPSELSPELFQLYNLFPYSDDYDETSTAVFPFLSDLLVSLRKESSSKELSASLKEFLKSLLEAIIKKFQEMRKKLKIFQDTINSIDSSLFSSYMYSAITSSLSLIEFALYETYIFGEGLRGSQILALVTTSQVCREILVRYASFFDYESAAIPALIEYFESSLAMLGDLLNISVSPVTDMDAPVPTRNSDFNSQLYLFETSSGNLTPEEQALYCDSLINALIGKANAALSSDLSALENIIVYCSLMAIGNFAKGFPAREEVAWLASFNKASFLILDRMGFNEDIRGAVRFTSGRIIN----VVGPDMLPKVPQLISILLNSIDMNELVDSFISQLIHIYK-----------------------DNMMEITNRMLPTLLMRIFSSLSAQGTDDAVKQNDLRKSYISFILQLFDPLINSILHFANLVPATQKSSIALVSKMVSLW | |||||||||||||
8 | 4xriA | 0.06 | 0.06 | 0.95 | 1.05 | SPARKS-K | FSQYLLTLVQALAGIALKNAFSAREFARQAALQAKWLNVKQLALETL-----ASPNSKAGQAAAQVIAAIAAIELPRNQWPE---LMHALVRNASEGGIGFICETQDNAILTAVVQGARKEEPNNEVRFAAITALGDSLEFVGNNFKHEGERNYIMQVVCEATQA----------QDSRIQQGAFGCLNRIMALYYEHMRYYKALFGLTILGMKSD--DEDVAKLAVEFWSTVCEEEIAIEQMRPFYNFARVATNEVVPVLLQLLSTIIPPVIQFVEHMDGPEEKVLEPIVKTGMQPLIAMMESTAYALGRITEACSEAID-----PNTHLEPLIRSLFNGLMNSPKMAASCCWALMNIAERFA--------GEPGAAQNPLTPHFNVTNLLTVTAPMNAANDSLSAVASLSTVILQRLEETLPLQQQVVSVEDKLILEDMQTSLCTVLQATVQRLDKEIAPQGDRIMQVLLQILSTCSSVPEGVFAAISALANAMEEEFAKYMEAFAPFLYNALGNQPSLCSMAIGLVSDVTRSLGERNFMNYLLGNLRSTTLANQFKASAIGGHFETYLTIVAQVLQQAATTAGPDGSYEMIDYVISLREGIMDAWGGIIGAMKTSNKTNQPYVESIFALLNSIANDP | |||||||||||||
9 | 2qmrA | 0.11 | 0.09 | 0.82 | 1.62 | CNFpred | IDSFIENLFALAGDEE----------------PEVRKNVCRALVMLLEVR------MDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDI----NLRKCSAAALDVLANVYRD-ELLPHILPLLKELLFHH----------------EWVVKESGILVLGAIAMQGMIPYLELIPHLIQCLDKKALVRSITCWTLSRYAHWVVSQ-----------TYLKPLMTELLKRILDSNKRVQEA-------ACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQ-HKNLLILYD--AIGTLADSVGHHLN----KPEYIQMLMPPLIQKWNMLKDEDKDLFP---------LECLSSVATALQSGFL-----PYCEPVYQRCVNLVQKTLAQAMLNYEAPDKDFMIVALDLLSGLAEGLG----GNIEQLVARSLTLMYQCMQDMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPFISVCNNATWAIGEISIQM-IPMVLHQLVEII-----NRPNTPKTLLENTAITIGRLGYVCPQEVAP--------------MLQQFIRPWCTSLRNIR------DNEEKDSAFRGICTMISVN | |||||||||||||
10 | 5ijoJ | 0.06 | 0.05 | 0.95 | 1.02 | EigenThreader | ERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVSKYRQQFEELYKTEAPTWETHCLREQSMLLEIIFLYYAYFEMAPSDLLVLTKMFKEQGFGSRQTNRLVDETMLVEGMDELHQFAQDDIPHHAPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNLTRLLQSLASGGNDCTTSTACMCVYGLLSFVL-TSLTLGNQQDIIDTACEVLADHVQRVKPIIDLVHKVISTDLSIADCLLPIPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFGYGNLLMNS--EEYGVTIAFLRLITTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHKWRY-NSHGVREQIGCLILELIHAILNLCHETDLHS---------------------------SHTPSLQFLCICSLAYTVINIMGIGVDTIDMVMIKTVKLAFSVTNNVIRLKPPSNVVSPLEQALSQHGAGNNLIAVLAKYIYPAIQLLKRLATVAVYACLGAAAIRDAFLTRLQSKIERIKVMILEFLTVAVETQPGLIELFLNLSVNCLRLGSMKCTLLLILLRQWEKTKAKVFSAFITVLQMKEVSDIPQYSQLVLNVCETLQEEVHLAKELCEVDEDGDSWLQVTRRLPILPTLLT | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |