Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | LPDRNVTAATIEEAYVQFVLHCNPAVPAETDTAALREAFRVPPKSGGKSFSTFTLFQLIRQLETKEIKTWAELALKLGVEPPDQDKGQSSQKIQQYAVRLKRWMHSMHVDAFFEYLMDHPHPYWTEIPDDPTPVCEAGRDGVMAEDDMALRALLPHIKPRRGRKRPEDDD |
1 | 6lqfA | 0.07 | 0.06 | 0.81 | 0.61 | DisCoVER | | KHHIVCSEEFLRDVMQFLLIRGHTRL---V-PPGGLAEFPDAVLNSKRLDLFN-LYREVVSRG--GFINWKGVFSKMRNHT----------RMTGVGNTLKRHY-----ETYLLEYE----YAHDVDGECCLIWVNCGSCGEWAH-FG-CDRRPGLGAFEYVCPNC---- |
2 | 4av3A | 0.05 | 0.04 | 0.81 | 0.83 | DEthreader | | VAFFIPLGFALLCLFVGAISSI--LAS----------IS-PIFF----ALVGLGCSMLGNISLWTSALLTVVLTAF-LTYLKLQGLFGAISPWFSAIIGIFSGILIGMLSFVTSVSVDSY-----------VGTAAIGKGFIG--SAIFAALSLFYAIGGPSLILIIM-- |
3 | 6lqfA | 0.07 | 0.06 | 0.96 | 0.66 | CEthreader | | AHIQVCSEEEFLRDVMQFLLIRG----HTRLVPPGGLAEFPDAVLNSKRLDLFNLYREVVSRGGNGINWKGQVFSKMRNHTLTNRMTGVGNTLKRHYETYLLEYEYAHDVDGECCLICRSSTAGDWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGLEYVCPNCSV--- |
4 | 6lqfA | 0.07 | 0.06 | 0.90 | 0.67 | EigenThreader | | AHIQVCSEEEFLRDVMQFLLIRG--HTRLVPPG--GLAEFPDAVLNSKRLDLFNLYREVVSRG--GFHVGNGIWKGQVFSKMRNHTNRMTGVGNTLKRHYETYLLEYEYAH----DDVDGECC---LICRSSTAGDWGSCGEWAHGCDKDYAKTDGLEYVCPNCSV---- |
5 | 1ryuA | 0.19 | 0.11 | 0.58 | 0.61 | HHpred | | --GGEPERKMWVDRYLAFTEEKAMG-------------MTNLPAVGRKPLDLYRLYVSVKEIGGTQVKKWRELATNLNVGTS-----------SSAASSLKK--------QYIQCLYAFECKIEREDPPPDI-------------------------------------- |
6 | 2kk0A | 0.13 | 0.08 | 0.61 | 0.43 | MRFsearch | | -----PKRKEFLDDLFSFMQKR-------------GTPVNRIPIMAKQVLDLFMLYVLVTEKGVINKKLWREITKGLNLP----------TSITSAAFTLRTQYMK-YLYPYECEKRGL---------------------SNPNELQAAIDSNR---------------- |
7 | 2eqyA | 0.10 | 0.06 | 0.64 | 0.65 | FFAS-3D | | GSSGEAQTRVKLNFL-----------------DQIAKYWEKIPHVERKILDLFQLNKLVAEEGGFAVRKWTKIATKMGFAPGK-----------AVGSHIRG-HYERILNPYNLFLSGDS---LRCLQKPNLTSDTKDKE------------------------------ |
8 | 6b7qA2 | 0.13 | 0.11 | 0.87 | 0.50 | SPARKS-K | | --RRQPNVDEIAAARIIQQILANP------------DCIHDHVLINGQKLEQQFFRDLLAKLNDTDIGNIDTLMRHEDTEHSTNPEAVPVKIGEYWINDQRINNNITQKKHDLIFLMQNDAWYFSRIAQN--------RDGSTFKEVLITTLMTPLTSKALVDTSQAKPP |
9 | 5l90A | 0.09 | 0.06 | 0.75 | 0.54 | CNFpred | | --------PKIARITNELLQEVE-----HLEDIDIVEHLS--------YPLPVMVIADILGVPIEDQRQFKDWSDIIVAGPSN-NERETLEKLQQEKMKANDELETYFYRIIEEKRTRPGDDIISVLL-----QAKEEGKQLTDEEIVGFSILLL--------------- |
10 | 6n7pX | 0.09 | 0.07 | 0.81 | 0.83 | DEthreader | | TYGPWNIKEAITN--YDINLLREYNGE--EMVE-LVRVVLNVAQLNELALFNDIIIDLVESLEFREVAR--QVITL-DLFFYEN-LAPTF-KIEDLAIETILGLI-FKLPSVSQ-----PFA----------------GRAFFHLDLKLRYLDWFSQMWWNEWEDDFKYF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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