Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | RKGETIVAGFEQQEAAVLRGLVSQLEDMLTARAEEAPQDELAELTGIRTGPTESPDDPVLSRLLPDFHKLDPDNPTREDIDSAAAMRSLHEPDLLDKKVGVAKIVLDTLPRDGGNVRLTFEQADAWLGALNDVRLALGTALDVTEDMPDELPEDDPRAPHLGVYHWLTWVQETLIQSL |
1 | 3onmA | 0.05 | 0.03 | 0.62 | 0.58 | DisCoVER | | MLSDLAITTAHPHVI-LRT--SP-TL--W---Y--C----SV-DYQFPVPLVVMDEPSLYREMAIIAYVASSLSAIRAAVRAGLGVTAD-LRV-LGEPG--LP--E--T----RYVLCKDKQC---------------------------DNELALAIFSALQNSY------------ |
2 | 6tjvP | 0.10 | 0.08 | 0.86 | 0.83 | DEthreader | | -----GGADTPV-NLMKIIGMYKAYSIPMDFYWR-D----LLY-LGERVFIPKYINMEFSEDL-ARMMWH----DLFLEQARQATYMNVLG-LFWEVMAPVFFEISDRYDEGSITSDAMN-FLVGIFA--YV-AVF-RT--FTFHYLFADKFPVDLVQLGIAFQHAMYTVTSALQRPL |
3 | 1gcwA | 0.11 | 0.08 | 0.78 | 0.59 | CEthreader | | --------AFTACEKQTIGKIAQVLAKS-------------PEAYGAECLARLFVTHPGSKSYFEYKDYSA--------AGAKVQVHGGKVIRAVVKAAEHVDDLHSHLETLALTHGKKLVDPQNFPMLSECIIVTLATHLTEFS-----------PDTHCAVDKLLSAICQELSSRY |
4 | 2rjsB | 0.12 | 0.11 | 0.89 | 0.73 | EigenThreader | | IGSLGDVLRDTSGMTGLGSLVVGRALEQAQQAE-----------------IVTALL--IEAVRGSTSPGHDIARPHEGQIDTAANMRALMIPQVVGAVRDTLYHARHKLRIELNSANHGQPIAFAMDFVTIALTQLGRVLNRHLSYGLPEFLVSSGFAGAQYPATALVAENRMGLISA |
5 | 1ng6A | 0.17 | 0.11 | 0.63 | 0.26 | HHpred | | ----------EKDKLTVVRMVKASLQNEAIKLK-----------------K-DSLTEDEELTVLSRELKQRK--------DSLQEFSNANRLDLVDKVQKELDILEVYLPE-----QLSEEELRTIVNETIA-------EVGASSKA-------DMGKVMGAIMPKV----------- |
6 | 6s1yA | 0.09 | 0.07 | 0.77 | 0.42 | MRFsearch | | ----EFNLSKKTKAAADFAEVAKAVAEELQQFKTD------------------QLTNATLKRRI-------------------KKLAKLGYAALPADQFKELLGAIASMESNKCDLSLDPEPVRESFQKYVELNRQAALRNNFSSGAAVWLDDSTFEQQVDDVIEQIRPLYEQLHAYV |
7 | 1sj8A1 | 0.10 | 0.08 | 0.79 | 0.66 | FFAS-3D | | ---------LTSAQQALTGTINSSMQAV----------QAAQATLDDFETLPPLGQDAASKA----------------WRKNKMDESKHEIHSQVDAITAGTASVVNLTAGDPAET--DYTAVGCAVTTISGVKLLAALLEDEGGNGRPQPASAEPRQNLLQAAGNVGQASGELLQQI |
8 | 6w2rA | 0.10 | 0.09 | 0.88 | 0.60 | SPARKS-K | | --------GTTEDERRELEKVARKAIEAAREGNTDEVREQLQRALEIESGTK-----TAVKLALDVALRVAQEAAKRGNKDAIDEAAEVVVRIAEEQALRVLEEIAKAVLKSEKT-----EDAKKAVKLVQEAYKAAQRAIEAAKRTG---TPDVIKLAIKLAKLAARAALEVIKRPK |
9 | 4pk7A | 0.17 | 0.12 | 0.72 | 0.58 | CNFpred | | --------------EKHLDALLRQIRNIVEKH---TDTDVLEAC------------SKTYHALCNEE---------FTIFNRVDISRSQLIDELADKFNRLLEDFLQE------GEEPDEDDAYQVLSTLKRITAFH-NAHDLSKWDLFAC-----DMPEQIVIHALQCTHYVILWQL |
10 | 6tjvP | 0.07 | 0.06 | 0.88 | 1.00 | DEthreader | | -----GGADNLMKIIGMYKAYSIPMDFYWRDLLYLGER----------VFINPKYNMEFSEDLARAMWH------LFPDLFLEQARQATYMNVLGLFWEVMAPVFFEISRYDGITANFLVNGIFIALAFYVAVFY-TSPFRGTYGFADKFPVCRDILVQLGIAFQHAMYTVTSAVLQA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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