Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | IPAIPLTMSAGLLFGSLTGTILVSISGTVAASVAFLIARYFARDRILKMVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGTWAYVSAGA |
1 | 3tdoA | 0.11 | 0.10 | 0.95 | 1.00 | DEthreader | | IMLTGNNMVMSAGMLSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLV-DKGPV-AEFFANTA-ASKASM-LF-RGCVFIEHVANMTIYSVSLTI-GGAIYNLVAVTLGNIVGGALFGL |
2 | 3kcuA | 0.08 | 0.08 | 0.99 | 1.00 | DEthreader | | CVLTSTVLIVVAARITWGQLAKNWLNVYFGNLVGALLFVLLMWLSEYMTAGQWLNVLQTADHK-VHHTFEAVCLGILAFVFHIANMFMIPMGIVMFITNLIPVTIGNIIGGGLLVGLTY |
3 | 3kcuA | 0.05 | 0.05 | 0.97 | 1.00 | DEthreader | | IVLTSTVLIVVAAITWGQLAKNW-LNVYFGNLVGALLFVLLMWLSGEY-MTAGQWGLNVLQTADHKVHHT-ACLGLAVFVAHIANMFMIPMGITV-MNFITNLIPVTIGNIIGGGLLVG |
4 | 3tdoA | 0.10 | 0.09 | 0.97 | 1.00 | DEthreader | | VILTGNNMVMSAGMLSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLV-DK-GPVAEFFANTA-ASKASM-FLFRGLCFIEHVANMTIYSVSLVTIGGAIYNLVAVTLGNIVGGALMLY |
5 | 3o7pA2 | 0.05 | 0.04 | 0.90 | 0.57 | DisCoVER | | ------RHWRWA-VLAQFCYV-GAQTACWSYLGTMVCFF-IGRFTGTWLISRF-APHKVLAAYALIAMALCLISAFVGLIALTLCSAFMSIQYSDAAGNIPTAE-LIPALCFAVIFIF- |
6 | 4fc4A | 0.09 | 0.08 | 0.93 | 1.00 | DEthreader | | TILTGHTMFLTLGISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGS--LL-----SIVHSVALAKTTAP-LFKGACNFIEHVANMTLFALSWYTLAGIGHNLLWVTLGNTLSGVVFGL |
7 | 3v5sA2 | 0.15 | 0.15 | 1.00 | 0.56 | CEthreader | | LPEILTSAYASYMHAPGISIGNAIGSCICNIGLVLGLSAIISPIIVDKNLQKNIFAAVIGIDGFSWIDGVVLLILFIIYLPELMVSLAAAKRNLGVLGNVIGSNIADIGGALAVGSLFM |
8 | 6wtxC | 0.13 | 0.13 | 0.99 | 0.97 | EigenThreader | | ISNTATAAMMLPLVLGVLVAYSASIGGILLLFGGGLCLSNVLKQTGTSVFLANALSDMVSHMVILVVATFVVFLTEFA-SNTASAALLIPVFMSPVLLSVLIAVAASCAFPNAIVFASG |
9 | 4a01A | 0.13 | 0.13 | 0.94 | 0.27 | HHpred | | --GSAAL-VSLALFGFVSLTPKVFIGLIVGAMLPYWFSAMTMKSVGRQFNTAKPDYATCVKISTDASIKEMI----PPGALVMLTPLVVGILGETLSGVLAGSLVSGVQIAISASNTGG |
10 | 4huqS | 0.09 | 0.08 | 0.90 | 0.22 | MRFsearch | | --TFLIVALIAKWFGPWWGMLTAAVVDVIGTFIGFTVSAVLGSLIYAVFLYRVSWWRVIGASVLIALLVNTLL----------NTLWVTIMYQTPFWSLLPVRALKELIVTPVQIVLVY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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