>PF08961 (198 residues) ADKEIAAHLQTSCKPSAEDSDDQNVLVPVTQRYSPSTEKHAQDIQGVFDRDPDTLLFLLQ KKKEPVETCIGSKAPKDDKTIIEEQATKIADLKRHIEFLVAENERLRRENKQLKAERARL QKSPVDKELDVDADFVEKSELWGLQQHSETASSAATWQKFATTAGKAKDIPIPNLPPLDI PSPELPLLELSEDILKGL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | ADKEIAAHLQTSCKPSAEDSDDQNVLVPVTQRYSPSTEKHAQDIQGVFDRDPDTLLFLLQKKKEPVETCIGSKAPKDDKTIIEEQATKIADLKRHIEFLVAENERLRRENKQLKAERARLQKSPVDKELDVDADFVEKSELWGLQQHSETASSAATWQKFATTAGKAKDIPIPNLPPLDIPSPELPLLELSEDILKGL | |||||||||||||||||||
1 | 1oxbA | 0.06 | 0.04 | 0.67 | 0.57 | DisCoVER | ------STIPSEI-I-------NWTILNEIISMDDDDSDFSKGLIIQFIDQAQTTFAQ-MQRQLDGE-KNLTELD-------NLGHFLKGSS--A----------A--LG--LQ-RIAWVCERIQNLGHFFLVTLSDKIDDDEEIKISIYLILI--A--KA--LNQSR-LEFLARELSK------------------- | |||||||||||||
2 | 1no3A | 0.04 | 0.03 | 0.75 | 0.67 | DEthreader | -GNDTFP-YP------NPNLIRCSKLHHDPIMLITVNDSCYHQLVSHWLNTAVVEPFIIATNRHSVHIYKLLHPHY-R-DTMNINGLARSLVNDIERYSVEMSA-V--V------------------------KDWVFTDQA------IKTWVHEYVF-YYSDLRDPLQWKVEVHGD-----WTASALHA-EVYDNPS | |||||||||||||
3 | 1vt4I3 | 0.03 | 0.03 | 1.00 | 0.48 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 2tmaA | 0.10 | 0.10 | 1.00 | 0.65 | EigenThreader | ALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEEL | |||||||||||||
5 | 1r05A | 0.22 | 0.09 | 0.38 | 0.48 | HHpred | ------------------------------------LERRRDHIKDS----FHSLRDS-------VPSLQGEKASR--AQILDKATEYIQYMRRKVHTLQQDIDDLKRQNALLEQQVRALEGSGC------------------------------------------------------------------------- | |||||||||||||
6 | 5dfzD | 0.14 | 0.09 | 0.61 | 0.35 | MRFsearch | --NDCCNILI------------------------NRLKSEYDDAIK-ERDTYAQFLSKLESQNKEISES-------NKEKQYSHNLSEKENLKKEEERLLDQLLRLEMTDDDLDGELVRLQEKKVQL----------------------ENEKLQKLSDQNL--------------------MDLNNIQFNKNLQSL- | |||||||||||||
7 | 1nkpA | 0.15 | 0.07 | 0.44 | 0.61 | FFAS-3D | -----------------------------------GHMNVKRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQLGG---------------------------------------------------------------------------- | |||||||||||||
8 | 6yvuB | 0.10 | 0.10 | 0.99 | 0.74 | SPARKS-K | KLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKADRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLSLKDKT-KNISAEIIRHEKELEPWDLQLQEKESQIQLAESELSLLEETQAKLKKNVETLEEKILAKKTHKQELQDL | |||||||||||||
9 | 5dfzD | 0.16 | 0.10 | 0.60 | 0.50 | CNFpred | -------------------------------------INRLKSEYDDAIKERDTYAQFLSKLESQNKEISESN----KEKQYSHNLSEKENLKKEEERLLDQLLRLEMTDDDLDGELVRLQEKKVQLENEKLQKLSDQNLM-----DLNNIQFNKNLQSLKLQY---------------------------------- | |||||||||||||
10 | 6yvuB | 0.11 | 0.08 | 0.72 | 0.83 | DEthreader | ---------------------------------------L-KERSILDDIKLS-LKDKTKNISAIIEKEWDLQLQEK-ESQIQLAESELSLLEETQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEASKPRLDDVILRLRQF-------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |