>PF08902 (262 residues) ILSVSRRTDIPAFYSDWFFNRIKEGFVLVKNPFNSKQVSKVILNPKVIDCIVFWTKNPKK MMKRLDEIKEYNYYFQFTLNSYDKTLETNVPEKKYLVNTFIELSKRIGKDRVIWRYDPII LTDKFTKDYHYKWFEYLAKRLSPYTNKCVISFLDLYRKTERNLKEINILPIDKDDMFELA EKFSKIASKYNVTIETCSEEIDLSKFNIKHGKCIDDRLISKVVDEKLSIDKDPNQREVCG CVKSIDIGAYNTCNHGCLYCYA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | ILSVSRRTDIPAFYSDWFFNRIKEGFVLVKNPFNSKQVSKVILNPKVIDCIVFWTKNPKKMMKRLDEIKEYNYYFQFTLNSYDKTLETNVPEKKYLVNTFIELSKRIGKDRVIWRYDPIILTDKFTKDYHYKWFEYLAKRLSPYTNKCVISFLDLYRKTERNLKEINILPIDKDDMFELAEKFSKIASKYNVTIETCSEEIDLSKFNIKHGKCIDDRLISKVVDEKLSIDKDPNQREVCGCVKSIDIGAYNTCNHGCLYCYA | |||||||||||||||||||
1 | 6xi9A | 0.05 | 0.04 | 0.75 | 1.00 | DEthreader | EVHITG-GVVPKQNLEFYSDFFR-R----------------AKAHRPELHIKALTVEYYIFHGMKYMQEAGLDSMPGGAEFHREKIAHDKCNAEQWLDIHEQAHKL-GM-KTNATM-LYGHI--EQFWHRVDHMERLRRQQDGGFQAFIPLKFRNQ-HN--QMDH--VPEVSVIEDLRNYAIARIYMD-NFDHIKAYWITALSLNFGVDDIDGT----------------LDDAMSDLLPIE-------------------- | |||||||||||||
2 | 6xi9A | 0.06 | 0.04 | 0.76 | 1.00 | DEthreader | EVHITG-GVVPKQNLEFYSDFFR-R----------------AKAHRPELHIKALTVEYYIFHGMKYMQEAGLDSMPGGAEIVREKIAHDKCNAEQWLDIHEQAHKL-GM-KTNATM-L-YGHI-EQFWHRVDHMERLRRQQDTGGFQAFIPLKFRNQHN--QMD--HVPEVSVIEDLRNYAIARIYM-DNFDHIKAYWIAQLSLNFGVDDIDG-T-------------LDDAMSTDLLIPIE-------------------- | |||||||||||||
3 | 4fhcA | 0.12 | 0.09 | 0.73 | 1.15 | HHsearch | YLQTTLVVNLDDIQAQKYINERAEITRFESDIVGIDHLKKAEIGATDYGRLRFVTKYEH--VDHLLDARNGKTRFRFSINS-RYVFEPGTSSFDGRLAAARKVAGA-GY-KLGFVVAPIYRHEGW-ERGYFELFQELARQLEGDLSDLTFELIQAKRVIEQRYPKTRLYVYRDEEAKELEDTMRRYIEQFFAYVQYFT---------------------------------------------------------------- | |||||||||||||
4 | 1j5sA | 0.08 | 0.06 | 0.82 | 1.00 | DEthreader | IVDPHN-H-LD---AKDIVE--NKPWEVEGDHYVWLTIDLRMPKLRMVEILCTTDDPVST-LEHHRKAKEVTILPTWRPDMNVDKEGWEYVMFLALWKSHEHFKEHG---CVASDHALLESTQDEINDYKAFMMVQFGKMNQETNWVTQLHIG-AL-RDYRDLFKP--STNFL-RIAEGLRYFLNEFDG-KLKIVLYVPLPTISTIAVYVGAPW----------------NDSPFGMHLLGMVTDSRKL------------- | |||||||||||||
5 | 1j5sA | 0.08 | 0.06 | 0.82 | 1.00 | DEthreader | IVDPHN-H-LD---AKDIVEN--KPWNEVEGDVMKWLIDMPLLRDMKVEILCTTDDPVSTLEHHRKAKEEVTILPTWRPDAMNVDKEGEYKMFLALWKSHEHFKEHG---CVASDHALLESTQDEINDYKAFMMVQFGKMNQETNWVTQLHIGALR-DYRDFK------TNFL-RIAEGLRYFLNEFDG-KLKIVLYVLHLTITIAFVYVGAPW----------------DSPFGMMHLLGMVTDSRKL------------- | |||||||||||||
6 | 1j5sA | 0.08 | 0.06 | 0.82 | 1.00 | DEthreader | IDHNH--L--D---AKDIVEN-KPWNEVEGDHYVWWLIDLPLLRDMKVEILCTTDDPVST-LEHHRKAKEVTILPTWRPDMNVDKEGWEYVMFLALWKSHEHFKEHG---CVASDHALLESTQDEINDYKAFMMVQFGKMNQETNWVTQLHIGALR-DYRDS-FK----TNFL-RIAEGLRYFLNEFDG-KLKIVLYVHLPTITIAFVYVGAPW---------------DSPFGMEMHLLGMVTDSRKL------------- | |||||||||||||
7 | 4fhcA | 0.14 | 0.09 | 0.65 | 0.88 | HHpred | RFEAACTSDIVGISLKKAIEFIGAT------D---Y--G----------RLRFVTKYEH--VDHLLDARNGKTRFRFSINS-RYVFEPGTSSFDGRLAAARKVAGA-GY-KLGFVVAPIYRHEG-WERGYFELFQELARQLEGDLSDLTFEFTKAKRVIEQRYPKTRLYVYRDEEAKELEDTMRRYIEQFFAYVQY------------------------------------------------------------------ | |||||||||||||
8 | 6efnA2 | 0.10 | 0.07 | 0.70 | 0.78 | DisCoVER | YLPISCTLQLTNELSEQWILVMQK---LA-----------------AHGVADITLTGKLIFKELVVVASSLFTNVNVFSNGL---------NW--RDEEVELLSHLG---NVSVQISIDGMTHLRGRKGGFKESMNTIKKLSEANIPVIVAMTI--------N--ESNADE----VSDVVEQCAN----AGAFIFRAGKVQQLREAWLNIID-------------------------WEDFCTPGYLAWYIRADGYVTPCQ- | |||||||||||||
9 | 4fhcA | 0.11 | 0.08 | 0.68 | 0.48 | MRFsearch | ----------VYVNLDDIFAQAQKYINER-----APEITRFEAACTDYGRLRFVTKYHVDHLLDARHN--GKTRFRFSINSVINHFEPGTSSFDGRLAAARKVAGA--GYKLGFVVAPIYRHE-GWERGYFELFQELARQLEMDLSDLTFELIQHKRVIEQRYPKTRKYVYRDEEAKELEDTMRRYIEQFFAYVQYFT---------------------------------------------------------------- | |||||||||||||
10 | 1j6oA | 0.10 | 0.09 | 0.85 | 0.58 | SPARKS-K | ----------------HHHHVDTHAHLHFHQFDDDRNAVISSFEENNIEFVVNVGVNLEDSKKSLDLSKTSRIFCSVGVHPVPED-------------FIEHLEKFAKDEKVVAIGETGLDFNISPAEVQKRVFVEQIELAGKLNLPLVVHIRDAYSEAYEILRTESLPEKDYEWAKKFIDLLREVVKRVGIVLETDCPFLPPQPFRGKR---NEPKYLKYVVETISQVLGVPEAKVDEATTENARRIFLEVKE-------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |