Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | CLTTNVPQKEIEKVNELYKNDSLVSKIAHTAAEIEGTYYGKLTRVEEIIAFAKRIGAKKIGIATCIGLMNEAKIFAKILKAKGLESYSVICKVGSIDKTEIGIAEEFKIQKGCHEALCNPILQARLLNREKTDLNVIVGLCVGHDSLFIKYSKAPVTTL |
1 | 2vlbC | 0.12 | 0.09 | 0.70 | 0.83 | DEthreader | | ----------------------------LVPADGARIASGSLMMSTAVLNGLRALGVRRVALATAY-IDDVNERLAAFLAEESLVPTCRSLG--T----------------GVEMARVTLVDLCVRAFEAPSDGILLSCGLLTLAIEVERRLGVPVVSS |
2 | 5x2mB2 | 0.10 | 0.06 | 0.65 | 0.46 | CEthreader | | --------------------------------------PSDIRQVDAMVQLIKKFNWNWVAVVGSEYGQQGVQQFSKKAEDMGVCVAYQGLIPIYDD------------------PKPAIQTIINNIQTTEVKVVVVFSLVSPAVSFFEEVITGVWIAS |
3 | 1jflA | 0.12 | 0.10 | 0.87 | 0.50 | EigenThreader | | HPKQIPDRTAYILQLIWTAKRLEECGFVEDIRKAIK--IPIISMIEETAKKVKELGFKKAGLLATTGTIVSG-VYEKEFSKYGVEIMTPRGIYEGVKA---------------GNLKLGRELLLKTAKILEAECIIAGC---TEVSVVLKDLKVPLIDP |
4 | 3lzcA1 | 0.26 | 0.15 | 0.58 | 0.46 | HHpred | | --------------------------------------LHE-IPKSEILKELKRIGAKRVLIQSPEGLRREAEELAGFLEENNIEVFL------------HG-------EI-NYGACDPADREAKL---VGCDALIHLG----HSYMK-LPLEVPTIFV |
5 | 2xecA | 0.13 | 0.12 | 0.89 | 0.42 | MRFsearch | | --MHTVSPEGLAAMNAQRERPGEHHRVESAVAEQLATGALVRSSAGALVEGLRALDAQRVALVT-PYMRPLAEKVVAYLEAEGFTISDWRALE-VADNTEVG--------------CIPGEQVMAAARSLDEVDALVISCCVPLVETAEREFGIPVLSA |
6 | 3pdiA2 | 0.10 | 0.09 | 0.86 | 0.57 | FFAS-3D | | -------SQALRDFARLLDDPDLTARTEALIAREEA-------KVRAALEWRARLEGKRVLLY---TGGVKSWSVVSALQDLGMKVVAT--GTKKSTEEDKARIRELMGDDVKMLDEGNARVLLKTVDEYQADILI----AGGRNMYTALKGRVPFLDI |
7 | 5cwjA | 0.14 | 0.12 | 0.86 | 0.74 | SPARKS-K | | --DSEEEQERIRRILKEARKEESLRQAIEDVAQLAKKSQDSEEAIRVILRIAKESGSEEALVAEIAKLEEAIRVILRIAKESG-------------SEEALRIRAVAEIAKEAQDVLEEAIRVIRQIAEESGSEEARRQAERAEEEIRRRAQ------- |
8 | 2vlbA | 0.11 | 0.09 | 0.82 | 0.72 | CNFpred | | -------------SLSFYRGAAFNAALTVAMREATG---PCTTMSTAVLNGLRALGVRRVALATAY-IDDVNERLAAFLAEESLVPTGCRSLGITGVEAMARVDTAT-----------LVDLCVRAFEAADSDGILLSCGTLDAIPEVERRLGVPVVSS |
9 | 5w6lA | 0.11 | 0.09 | 0.89 | 1.00 | DEthreader | | QE-LDSDRDQIEGIYRSSHEDDAWDRRYGY-DELTNKLASATGVDEQ-LAVLLDDRK-GLLIGEVHGSDVNGLRFVNEQDALKVVIGLEHDASARPNVQ-----G-TE------HGLYRAGAANNIAVEVLQKFVAIYGKA-HLQSPGITHRLDLPALK |
10 | 2xecA | 0.15 | 0.13 | 0.90 | 0.51 | MUSTER | | MRMHTVSPEGLAAMNAQRERPGEHHRVESAVAEQLATGGSQASSAGALVEGLRALDAQRVALVTPYM-RPLAEKVVAYLEAEGFTISDWRA---------LEVADNTEVGCIPGEQ---VMAAARSLDLSEVD-ALVISCCLPLVETAEREFGIPV--L |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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