>PF08889 (215 residues) QPSYLPWLGFFEQMTRSDKFVLLDDVQYTRRDWRNRNKVRVKEGWVWLTVPVQQKSRFSQ SLLETRIDNSVSWRRKHLETLRQHYCKAPFFEKYFPRCQQIYEKDWEFLFDLCLETIQFL KEEMGIETPLLRSSEMKLSGEKTERLVSICRELGATHYLSGESGSDYISQEDFSNQGIEL EYQNYEHPVYPQRYPGFVPHLSTIDLLFNCGEQSL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | QPSYLPWLGFFEQMTRSDKFVLLDDVQYTRRDWRNRNKVRVKEGWVWLTVPVQQKSRFSQSLLETRIDNSVSWRRKHLETLRQHYCKAPFFEKYFPRCQQIYEKDWEFLFDLCLETIQFLKEEMGIETPLLRSSEMKLSGEKTERLVSICRELGATHYLSGESGSDYISQEDFSNQGIELEYQNYEHPVYPQRYPGFVPHLSTIDLLFNCGEQSL | |||||||||||||||||||
1 | 4wbdA | 0.10 | 0.10 | 0.95 | 1.33 | DEthreader | QAGLTGPLYTIHKIISIPIFWVAGEDHD---LDEINFVHTSEEGPVKKKLPQSYWK--KSSAASTSLDQ-EKCAA-WIDDVFAAFEETDHTNTLLDNVKRCL-RESVTFTDFFELLIADLFQ--EEGLVLLNSGIKEFINNVVTRPLMQEFLIPTLAFIAGPGEINYWGELKAFAKMPPVMPRLNITILERHIERISPQEWNIMYYLNRYGPKFT | |||||||||||||
2 | 4wbdA | 0.12 | 0.12 | 0.97 | 1.00 | CEthreader | QAGLLTGPLYTIHKIISIIVIFWVAGEDHDLDEINFVHTSEENGPVKKKLP----QSYWKKSSAASTSLDQEKCAAWIDDVFAAFEETDHTNTLLDNVKRCLRES-VTFTDFFELLIADLFQEEGL--VLLNSGDPGIKKLETAMFQKILRENDELARAVSDQQAFMRQPIIESGKEQANLFYEYEDERFLIEKDNGRFVIKELDLGWTRDELHT | |||||||||||||
3 | 4wbdA | 0.10 | 0.09 | 0.94 | 1.20 | EigenThreader | AGLLTGPLYTIHKIISIIVPIFWVAGEDHDLDEINVHTSEENG---PVKKKLPQSYWKKSSAAST--SLDQEKCAAWIDDVFAAFEETDHTNTLLDNVKRCLRE-SVTFTDFFELLIADLFQ---EEGLVLLNSGDPERFVVTRPLMQEFLI---PTLAFGEINYWGELKQAFAVMGFKMPPVMPRLNSIKPLLAPQERIWNIMYYLNRYGPKFF | |||||||||||||
4 | 4wbdA | 0.11 | 0.10 | 0.96 | 1.33 | DEthreader | QAGLTGPLYTIHKIISIPIFWVAGEDHDLD--EINFVHTSEENGPVKKKLPQSYWKK--SSAASTSLDQ-EKCAAWIDDVFAAFEET-DHTNTLLDNVKRCL-RESVTFTDFFELLIADLFQ--EEGLVLLNSGIKEFINNVVTRPLMQEFLIPTLAFIAGPGEINYWGELKFAFKMPPVMPRLNITILERHIDRNSPQIWNIMYYLNRYGPKFF | |||||||||||||
5 | 3ip5A2 | 0.09 | 0.05 | 0.53 | 0.62 | DisCoVER | DDQQGG-IAGKYLAK-DAKVAIIHDK--------------------------------TPYGQG--------------------------------------------LADETKKAANAAG--VTEVVSIIYWGGL-----HT-EAGLIIRQAAKAKLVSGDGIVSELA--IAGDA-VGTLNTFG-YVMYEWK-------KGPDGKFTYIQ---- | |||||||||||||
6 | 2zufA2 | 0.08 | 0.07 | 0.77 | 1.00 | DEthreader | VNPTKLHMGHARNAILGAVQNYIDDLGI----QFA-------------QVYWG------------YLRLKEEFERIMNE-LRE--R-----G-LKDNPIDHA---GRKLAEEVVRAQMVTTYKLGVKYDLLVWEDILFEATYTGKDIAYHLWKAIVINVIGAEQKH-PQLAIKYQAALYHLAYEHVERP-------TWV-FTVDEVIQEAVAEIG | |||||||||||||
7 | 3e61B | 0.04 | 0.03 | 0.78 | 0.51 | CEthreader | ------------------------------------------------LIGLLLPDMSNPFFTLIARGVEDVALAHGYQVLIGNSDNDIKKAQGYLATFVSHNCTGMISTAFNENIIENTLTDHHIPFVFIDNGISTNHFKGGQLQAEVVRKGKGKNVLIVHEQRVQGIKYILDQQRIDYKMLEATLLDNDKICSNDLLAINVLGIVQRYHFKVP | |||||||||||||
8 | 5x68A | 0.09 | 0.07 | 0.74 | 0.57 | EigenThreader | GGGLVGSLQACFLAKRNFQIDVYEAREDTRVASINL-ALSQIVSQGIPMRRMIHSLSGKKS---AIPYGT-----------------------------------KSQYENLNKDLLTAAEK----YPNVKMHFNHRLLCNPEE----------GDLIVGCDGA--YSTVRSHLMFSHCVLLGDAAHAIVPFFGQGMNAGFEDCLVLMDKFSNDL | |||||||||||||
9 | 4wbdA | 0.14 | 0.12 | 0.89 | 0.39 | HHpred | QAGLLTPLYTIHKIISIPIFWVAGDHDL---DEINFVHTSEENGPVKKKLPQSY-W-KKSSAASTSLDQ-EKC-AAWIDDVFAAFEETDHTNTLLDNVKRCLR-ESVTFTDFFELLIADLFQEEGL--VLLNSGDPGIK----KLETAMFQKI-----LRENDLARVSDQAFMRQAGYKPIIES--GKEQANLNGRFVIKWTLHTHMEE-HPE-- | |||||||||||||
10 | 6hm9A2 | 0.17 | 0.11 | 0.64 | 0.37 | MRFsearch | -------------------------------------------KMVGLTIDDA---------------WGNEYLPRILEILKKHDVKATFFLENLRFAKMIVDASSDEIRDQLQKTNRMIEAATNQKVRWFRPP----SGSFRDEVVKIADDFQMGTIMWTVPEPDVLLQRVMRKIGAIVLMHP------------TSSTTEALDTMITKL---- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |