Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | HTVYRGVKDCDFKLEPSIMRLGYSDENELINAEKRLFKAFKQQALPHLEYTPKNDWEWLALAQHHGLPTRLLDWSKNPLIALYFAIEEETNSD |
1 | 3cumA2 | 0.07 | 0.05 | 0.72 | 0.59 | DisCoVER | | ITAEAPWPGVENAPADYSGGF-----------A--QAKDLGLAQEAASSTPGSLALSLYRLLLKQGAERDFSVVQKL---F--DP-------- |
2 | 4xhaA | 0.04 | 0.03 | 0.87 | 1.00 | DEthreader | | KYRICP-------D-FKQMDGVLTTTLFDTVKSALAYNDWADQLMFGSL--NLLEEYAIEFFKNKHGLVIKETWKPAVTEQKFLGLLPFED-- |
3 | 4tviA1 | 0.06 | 0.05 | 0.95 | 0.62 | CEthreader | | LGAASQATWLGSLVFDGARLFEGV-----TPDLDRHSARANDSARALGLEPTLSANDIEALAREGVYIRPMYWAEEGDASTVAPLASSTDFAL |
4 | 5mmmf | 0.09 | 0.08 | 0.82 | 0.58 | EigenThreader | | PGLRQYE------TMAVLRDMTEDERLTLTQKYAGVIPLYSIKRKNKAGETN----NYL------DGIYLLFTYTKPE-SISPLEAALVTDDD |
5 | 2pffB | 0.12 | 0.10 | 0.83 | 0.37 | HHpred | | ----------LLGFTPGELRSYLKGATSWVSVRKAITVLFFRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVNKTNS------ |
6 | 4mz0A2 | 0.13 | 0.12 | 0.90 | 0.40 | MRFsearch | | -LLFTGQGSQYVNMGRQLYQQAPVFRKALEQCNEILKSLLEILYPANLDQTFALEYALFKLWQSWGIQDVVMGHSVGEYVAATVA-------- |
7 | 3gvhA4 | 0.16 | 0.10 | 0.59 | 0.36 | FFAS-3D | | -------------VTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPETNPLDAMVWALQKFSGLP------------------------- |
8 | 5cwcA1 | 0.09 | 0.09 | 0.98 | 0.69 | SPARKS-K | | -SEKEELRERLVKICVENAKRKGDDTEEAREAAREAFELVREAAERA-GIDSSEVLELAIRLIKECVENAQREGYDISEACRAAAEAFKRVAE |
9 | 6d0yC | 0.12 | 0.10 | 0.82 | 0.53 | CNFpred | | ------------TIYTTLVGL---LNARNYNFGGEFVEAMIRQLKESLKANNYNEAVYLVRFLSDLVNCHVIAA--PSMVAMFENFVSVTQEE |
10 | 2ptzA | 0.05 | 0.04 | 0.86 | 1.00 | DEthreader | | ASGFQE---------MIAP-VKATSFSEALRMGSEVYHSLRGIIKKKYGDAVNVGGFAPPI-NEPLLMAICMDCAETYYLVAQL-RECI-ALK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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