>PF08737 (437 residues) TLMMGYAQIQGSFTLDGSLVNLGPFEQVKRKAVVGGHGGGVIGVETTKRDSGLLRGFGWG SITSSIGELLGGGELSTIKEMRGIASSKSIPLLSTPQSILFVDLQLAPGESKTFEYSFKL PKGLPPTHRGKAMKISYSLVIGTQRPGGAKDKHVKSVDVPFRVLGSVNSHGEILGHDLMA PYIILRDQARVKTIDNTNTASTTTLHNHNHQQQPQQARQKLLGDKPAANEDSFLSYVDEL LSSRSLQLQNGARAPGLLSPTASGPPSRRQSNYSLNSNTSSHFNPFGPQTHMPALTAKEA IDLAILRSNIASHYSNQSTNRFEIARNGRRVAVVMLARPAYRLGEQITMAIDFEDAEIPC YAVHVALETAERVDSSLALRSEASVHRVTRKVLVSSSEATMFAKRVVFTPTIPVTATPEF VTSGVSLEWKVRVEFVV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | TLMMGYAQIQGSFTLDGSLVNLGPFEQVKRKAVVGGHGGGVIGVETTKRDSGLLRGFGWGSITSSIGELLGGGELSTIKEMRGIASSKSIPLLSTPQSILFVDLQLAPGESKTFEYSFKLPKGLPPTHRGKAMKISYSLVIGTQRPGGAKDKHVKSVDVPFRVLGSVNSHGEILGHDLMAPYIILRDQARVKTIDNTNTASTTTLHNHNHQQQPQQARQKLLGDKPAANEDSFLSYVDELLSSRSLQLQNGARAPGLLSPTASGPPSRRQSNYSLNSNTSSHFNPFGPQTHMPALTAKEAIDLAILRSNIASHYSNQSTNRFEIARNGRRVAVVMLARPAYRLGEQITMAIDFEDAEIPCYAVHVALETAERVDSSLALRSEASVHRVTRKVLVSSSEATMFAKRVVFTPTIPVTATPEFVTSGVSLEWKVRVEFVV | |||||||||||||||||||
1 | 3lh9B | 0.12 | 0.07 | 0.57 | 1.04 | HHpred | ---------EVEILLNDAESRKREHKTKKKYFLFYDTVSGKVSLSLKNPHQGIKIE------------FIGQIELY-------YDRGNHHEFVSLVKDLAR-PGEITQ--SQAFDFEFTHVEKPYESYTGQNVKLRYFLRATISRRLN-----DVVKEMDIVVHTLSTY-----------PE-----------------LN---------------------------------------------S------------SI-----------------------------------------------------------KMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLSVEIKIKHMEIDIIKRETTGTG----P--NVYHENDTIA-KYEDGPVRGESIPIRLFLAGELTPTMRNKKFSVRYYLNLVLID | |||||||||||||
2 | 2r51A | 0.12 | 0.06 | 0.53 | 2.17 | CNFpred | ETVSGKVSLSLKN----------PNKRLEHQGIKIEF-------------------IGQIELYYDRG--------------------NHHEFVSLV-KDLARPGEIT--QSQAFDFEFTHVEKPYESYTGQNVKLRYFLRATISRR-----LNDVVKEMDIVVHTLS----TYPELN--------------------------------------------------------------------------------------------------------------------------------------------SSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGP---NVYHENDTIAKYEIMDGAPV-RGESIPIRLFLAGELTPTMRDIKFSVRYYLNLVLID | |||||||||||||
3 | 3lh9B | 0.08 | 0.05 | 0.60 | 0.78 | DisCoVER | SVEVEILLN-----------DAESR--KRAEHKTEDGKKEKYFL---------------------------------------------FYDGETVSGKVSLSLKN-------------PNKRLEHQGIKIEFI-------GQIELYYDRGNHHEF-----VSLVKDLARPGE--ITQSQAFDFEFTHV---------------EKPYESY----------------------------------------TGQNVKLRY---------FLRATIS--RRLDVVKEMDIV----------------VHTLSTYPELNSSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLSVEIKIKHMEIDIIKRETTG--T----GPNVYHENDTIAKYEIMAPVRGESIPIRLFLAGYELTPTMRKKFSVRYYLNLVLI- | |||||||||||||
4 | 6rutB1 | 0.05 | 0.03 | 0.60 | 0.67 | DEthreader | ---------------EVVQYFVLLVPKVALEYHNLNVKES-----------------EAWKPL-LTTDQIA---R-EKGMGATVVDHIDPKM-----------YNARNLLQTTGFFAGGLIDLPLRMAVSGVLALTM-D-ATRLQLEKHLNLVAQGQG-----------------EDLQIF------------RPDIPVGAWL--------------------KHVYQLFNWSNKNNSPNSLFAAILLLKIFYGENEFR--L----YLNV------------VQ-----------RF-TTGPNLDTFDQFLDFPSNTFLLLRS--------LLGTIPVLYNALGFVGSGLNWPWSPALKSLPTLFQLYQPNKV---YNKLI--EPVDATAALLLLTTKN------IKAKLG-------------------------- | |||||||||||||
5 | 2q3zA | 0.07 | 0.06 | 0.98 | 0.64 | CEthreader | QLTTPANAPIGLYRLSLEASTGYQGSSFVLGHFILLFNAWCPADAVYLDSEEERQEYVLTQQGFIYQGSAKFIKNIPWNFGQFQDGILDICLILLDVNPKFLKNAGRDCSRRSVYVGRVGSGMVNCNDDQGVLLGRWDNNYGDGVSPMSWIGSVDILRRWKNVFAAVACTVLRCLGIPTRVVTNYNSAHDSNLLIEYFRNSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEKSEGTYCCGPVPVRAIKEGDLSTKYDAPFVFAEVNADVVDWIQKSINRSLIVGLKISTKSVGRDEREDITHTYKYPEGSSEEREAFTRAN--HGMAMRIRVGQSMNMGSDFDVFAHITNNTAEEYVCRLLLCARTVSY--------NGILGPECGTKYLLNLTLEPFSEKSVPLCILYEKYRDCLTESNLIKVRALLVEPV | |||||||||||||
6 | 6h7wJ | 0.11 | 0.05 | 0.45 | 0.78 | EigenThreader | LEHTIKVQFIGTIEMF---------------------------------------------------------------------------FLSL---VQELAAPLQHP-QTFDFNFKNVEKQYESYNGI--NVKLRYFVRVTVSRR----MADVIREKDIWVY------------------------------------------------------------------------------------------------------------------------------------------------SYRIPPELNSSIKMDVGIEDCLHIEFEYSKSKYHLKDVIVGRIYFLK----IKHMELSIIRRETTGVA-PNQYNESE------TLVRFEIMDGSPSRIRLFLGGFDLTPTFRDVNKFSTRYYLSLVLID | |||||||||||||
7 | 5cl2A | 0.16 | 0.08 | 0.51 | 0.74 | HHpred | ---------------------------LEKDAYFGEEVQGTVHVKGGKIIRYIDL------------QLSTRYV----IVKDDEEHRKYATIHSFR---VTGSFTIQPGEEHQFPFTFTLPLDTPITV-G---KVEVAVVTDLDIQGG----IDKSDHDRIFVEAHPWIEN---VLEAIENLGFRLNEADCEQAPY-FQRRLP-F----VQE---------FEFVP--TSGYYRQMLDELELIFLLDED----GLEIIF-----EVDRRAGWLEEMEQLVRVFSQSELED--TE-ELEEVLEEILDQY--------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 3lh9B | 0.14 | 0.06 | 0.47 | 0.62 | MRFsearch | --QGIKIEFIGQIELYY---------------------------------------------------------------------------DRNHHEFVSLVKDLARTQSQAFDFEFTHVEKPYESYTGQNVKLRYFLRATISRRL-----NDVVKEMDIVVHTLS-------------TYPEL-----------------------------------------------------------------------------------------------------------------------------------NSSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLSVEIKIKHMEIDIIKRETTGTG-------PNVYHENDTIAKYEIMDGRGESIPIRLFLAGELTPTMRDIKFSVRYYLNLVLID | |||||||||||||
9 | 3lh9B | 0.14 | 0.07 | 0.48 | 0.80 | FFAS-3D | ----------------------------------------------------------------------DAESRKRAEHKTEDGKKEKYFLFYDGETVSGVSLSLKPGEIQAFDFEFTHVEKPYESYTGQNVKLRYFLRATISRRLNDVVKEMDIVVH-----------------------------------------------------------------------------------------------------------------------------------------------------TLSTYPELNSSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLSVEIKIKHMEIDIIKRETT-------GTGPNVYHENDTIAKYEIMPVRGESIPIRLFLAYELTPTMRDKKFSVRYYLNLVLI- | |||||||||||||
10 | 4wa0A | 0.10 | 0.08 | 0.75 | 0.94 | SPARKS-K | SSPLDYAIFSGALNTN------------KNLTVEN---GSVYSGGDLTIDGGAVFNIDNLISKGEVINQDSDSRC--------RDNNIVVNIIYVEKSLKA---NRISPRDAKTIYVGQE------QLYGAGYKFVQLFSVKLAGPGVNEVSTLASIRGTLEVIDGLKSNSAVYCNSLVVSRLILENGAKLYLATTPDASTIISIQNNGGTISYSS-----SFSYPSPP-----AEIDEIRNRDYTSGLLTTP-----LPADSVGSNQLGSTADTSQTPPQIVIYGES-----YIND-NEARIEISARLGSPIVDFSTLQLHLISRGN-----ITFVGGGLTINGSIISLFNINATGNPYAGLTLKYQPSPPIQQDIESNTGIQPSQ-------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |