Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | IYFLAYGLGVTLACVVIFNYEKTSSPIINSVMYFLRRSQNAKQLLGDNINFKQSWPWIWGTLNTVRGDIDIEFSVQGSQNSGILKLKATRESKLHPFHIHHWVLQINDAQKTQVNLL |
1 | 2ciuA | 0.12 | 0.09 | 0.80 | 1.00 | DEthreader | | --------------------SG-DTQLFNRAVSMVEKNKDIRSLLCERLKAYGRNRPIVSTKKLGRTHHYMRFHVESKKKIALVHLEAKESKQNYQPDFINMYVDVP-G-EKRYYLI |
2 | 2ciuA | 0.12 | 0.09 | 0.79 | 1.17 | DEthreader | | --------------------SG-DTQLFNRAVSMVEKNKDIRSLLQCELKAYGNRPIV-STKKLGRTHHYMRFHVESKKKIALVHLEAKESKQNYQPDFINMYVDVP--GEKRYYLI |
3 | 2ciuA | 0.13 | 0.10 | 0.79 | 1.30 | HHpred | | ----------------------GDTQLFNRAVSMVEKNKDIRSLLQCRLKAYGELKWIVSTKKLKEGRHYMRFHVESKKKIALVHLEAKESKQNYQPDFINMYVDVPGE--KRYYLI |
4 | 2ciuA | 0.12 | 0.09 | 0.79 | 1.81 | DisCoVER | | ---------------------DT--QLFNRAVSMVEKNKDIRSLLQCRLKAYGELRPIVSTKKLGRTHHYMRFHVESKKKIALVHLEAKESKQNYQPDFINMYVDVPGEKRYYLIK- |
5 | 2ciuA | 0.12 | 0.09 | 0.78 | 1.55 | MRFsearch | | ------------------------TQLFNRAVSMVEKNKDIRSLLQCRLKAYGELRPIVSTKKLDRTHHYMRFHVESKKKIALVHLEAKESKQNYQPDFINMYVDVP--GEKRYYLI |
6 | 2ciuA | 0.10 | 0.09 | 0.82 | 1.60 | SPARKS-K | | ---------------------SGDTQLFNRAVSMVEKNKDIRSLLQCDLKAYGELIPIVSTKKLDRTHHYMRFHVESKKKIALVHLEAKESKQNYQPDFINMYVDVPGEKRYYLIKP |
7 | 2ciuA | 0.12 | 0.09 | 0.79 | 1.11 | MAPalign | | ----------------------GDTQLFNRAVSMVEKNKDIRSLLQCDLKAYGENRPIVSTKKEGRTHHYMRFHVESKKKIALVHLEAKESKQNYQPDFINMYVDVP--GEKRYYLI |
8 | 2ciuA | 0.12 | 0.09 | 0.80 | 1.36 | CEthreader | | ---------------------SGDTQLFNRAVSMVEKNKDIRSLLQCDLKAYGELIPIVSTKKLDRTHHYMRFHVESKKKIALVHLEAKESKQNYQPDFINMYVDVPG--EKRYYLI |
9 | 2ciuA | 0.12 | 0.09 | 0.80 | 1.21 | MUSTER | | ---------------------SGDTQLFNRAVSMVEKNKDIRSLLQCRLKAYGELIPIVSTKKLDEGHHYMRFHVESKKKIALVHLEAKESKQNYQPDFINMYVDVPGEK--RYYLI |
10 | 2ciuA | 0.12 | 0.09 | 0.80 | 2.95 | HHsearch | | ---------------------SGDTQLFNRAVSMVEKNKDIRSLLQCRLKAYGELKWTVSTKKLKEGHHYMRFHVESKKKIALVHLEAKESKQNYQPDFINMYVDVPGE--KRYYLI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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