Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | LPRVPTTRYLESTKLTNDILFSGYRPITYPVKENPLFRNINKYNNDFLSTQETQEKNNPVLPQKNHEAFSVLTGEKGTGGIMSGGVNGTWKYNPTVPENLLPYNWWSTSIMGMEYYPEWNNVPRRFLKTLKPFEV |
1 | 3f3fD | 0.07 | 0.06 | 0.86 | 0.83 | DEthreader | | YVLIYDRVFHNATVNLMEAILNLSLLLRYFILDG--QDVENRSEFI-ESLLNWINRSDGE--SRTWESFCGFLLYYIPSLLSYLQMS-------V-ITNDWEQP--CV----DIISGKIHSLVESLDSCTFMIEG |
2 | 1vt4I | 0.07 | 0.07 | 1.00 | 0.70 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
3 | 3qb0A1 | 0.06 | 0.06 | 0.95 | 0.50 | EigenThreader | | PNCLVVDIGHDT---CSVSPIGMSKSTRRNIAGKFINHLIKKALEKEIIPLFAIKQRKPEYDYANNRGFFQECKETLCHICPDNETRYGFAEELFLPKEDIGLADLVYSSIMSSD----VDLRATLAHNIPGLSD |
4 | 3k1qA4 | 0.11 | 0.07 | 0.69 | 0.30 | HHpred | | LVDAPN-DYFDRERMARRDLFRRLRAPAD----RSAIKDR------AVFDFLASLVNPT-TANPVLDTSFSMAY---------LGASSAHADEPVIPRRIVQF-GYDVVLLDLSR-------------------- |
5 | 2pffB | 0.28 | 0.05 | 0.19 | 0.63 | MRFsearch | | ------------------------------------------------------------------DDYGFKQGGGGGGGGGGGGGQGSQE-------------------------------------------- |
6 | 1nwxD | 0.12 | 0.11 | 0.96 | 0.36 | FFAS-3D | | VPRIEDSKAIDKAAKELALI-TLQKPIITKAKKSISNFKLRQGMPVGERMYVFLEKLINIGLPRIRDFRGINPNAFDGRGNYNLGIKEQLIFPEITYDMVDKTRGMDITIVTTAKTDE---EARALLQSMGPFR- |
7 | 5jcss | 0.10 | 0.10 | 0.94 | 0.92 | SPARKS-K | | EIYIDELHSRSTA---FDRLTLG-----FELGENIDFVSIDDGIKKIKLNEPDMSIPLKHYVPSYLSRPCIFILLLSDEEPIEESLAAVIPISHLGEVGKWANNVLNCTEYSEKKIAERLYVFITFLTDMGVLEK |
8 | 4q2bA | 0.06 | 0.01 | 0.24 | 0.42 | CNFpred | | -------------------------------------------------------------------------------------------------------SYLPLQLLDRFVDPLWGELAANTRRLWLASSP |
9 | 3psfA | 0.04 | 0.04 | 0.83 | 0.83 | DEthreader | | GISAELSKTIKVDFYIHLFQILENKLFQMKFQDI--SQEVKDNLTKNCQKLVAKTVRHKFMTKLDQ-APFIPNVDPKIPAGVEDEVALRMHSLLIVNL-S-V----EVNKATDNY--------------LNEPHI |
10 | 6h9hB1 | 0.13 | 0.12 | 0.90 | 0.56 | MUSTER | | L-ALPAGKKLWPNDLREALAKHDLPPLFFSR--DPQTGHAITRAMRNEKRVRGYIEQHGHEPPPPTEEQRANPLAIPGIRIVGSSLATGERYKPLLEAATLPAIQIVTQRCGR-------GVGVELEQH----TL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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