Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | TVKVPKVHLTPSAREEITARRAVWGTEVYTDDSDIIAACIHGGWIRGEWADDIDADMLDLDRGLAAPEKEVPANKRRKQKEKEEKARQEANAATFLDKPPKTGPVTVPIERDMHVTLLILPRLEKYSSTTRFGIQSREF |
1 | 1jbiA | 0.12 | 0.07 | 0.60 | 1.12 | DisCoVER | | PIAITC---------------------FTRGL-DI--RK-EKADVLCPGG--CPLEEFSVYGNIVY----A-----------------------SVSSICGAAVHRVISNSGGPVRVYSLPGRENYSSVDAGIQSASF- |
2 | 1jbiA | 0.34 | 0.17 | 0.49 | 1.31 | HHpred | | DVLCPGGCPL--------EEFSVYGNIVYASVSSICGAAVHRGVISN---------------------------------------------------------------SGGPVRVYSLPGRENYSSVDANGIQSQML |
3 | 1jbiA | 0.34 | 0.17 | 0.48 | 1.63 | MRFsearch | | -VLCPGGC--------PLEEFSVYGNIVYASVSSICGAAVHRGVISNS---------------------------------------------------------------GGPVRVYSLPGRENYSSVDANGIQSQML |
4 | 1jbiA | 0.34 | 0.17 | 0.49 | 1.21 | SPARKS-K | | DVLCPGGCPLEEFS--------VYGNIVYASVSSICGAAVHRGVISNSGG---------------------------------------------------------------PVRVYSLPGRENYSSVDANGIQSQML |
5 | 1jbiA | 0.35 | 0.17 | 0.47 | 1.17 | CNFpred | | DVLCPGGCP----------EFSVYGNIVYASVSSICGAAVHRGVIS---------------------------------------------------------------NSGGPVRVYSLPGRENYSSVDANGIQSQML |
6 | 4zyoA | 0.13 | 0.10 | 0.79 | 0.83 | DEthreader | | -FYVSALGIT-GAH-RLWRKARLP---------L-RLFLI-IANTMAFQ---NDVYEWARHRAHHDPHNSRRGWVRKHPAVK-EKGSTLDLSEAEVMFQRRYYKLLMCPTRYV-----------YDYSRWNFTFFCMAY |
7 | 2cf2C1 | 0.09 | 0.09 | 0.98 | 0.67 | CEthreader | | ---VDKRESYTKEDLLASGRGELFGAKGPQVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEGKGRALGTGQVLPTAKKVTYRIHFKRIVNRRLIDGEVLVDGRLIYTAS |
8 | 6nvwB3 | 0.07 | 0.07 | 0.99 | 0.73 | EigenThreader | | ALLFSGPYGNVAQSMSAYMKANWAKNLKEFENAASEYGDI--AYYHVGRYPVRNSGEYSFYWGEDNRVQQYINGMEARDINEINYTASFAKTMTFGEKSLIGIPHGMNRGSENHYIEMTPTPPGQIGFVKKDGTISDHY |
9 | 2pffB | 0.11 | 0.04 | 0.38 | 0.43 | MRFsearch | | -VIVAGTLMGMDLYKTSKAAQDVWNR----------------------------------------------------ADNHFKDTYGFSILDIVIN-------------NPVNLTIHF-------------------- |
10 | 1jbiA | 0.34 | 0.17 | 0.49 | 0.76 | FFAS-3D | | DVLCPGGCPLEEF--------SVYGNIVYASVSSICGAAVHRGVISNSGG---------------------------------------------------------------PVRVYSLPGRENYSSVDANGIQSQML |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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