>PF08637 (285 residues) LLSSSTILRIVVNRRQEILQWVQDFGVTVRDFWFNWVVEPVRKVIGTIRHDSNSEIAIMS KDSLKADRESLERMVVDFAIDKPSAATGESSLSETQVAEIRAKVKEGDLTPVLRAYEKDL RSPFKGTVRGDLVRTLLIQVQKTKVDVEVAMSGIDALLKSQELVFGFVGLTPGILVSIGV MQYLRGAFGGRKGLNQSRRARRCVRVLRNIDRILSEALASPPQNNVLQYKDHGMLISEIH VLRRLARKIIPGDIEKEFLEDLDDLANLKGIGSQVRALERIRWAY |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | LLSSSTILRIVVNRRQEILQWVQDFGVTVRDFWFNWVVEPVRKVIGTIRHDSNSEIAIMSKDSLKADRESLERMVVDFAIDKPSAATGESSLSETQVAEIRAKVKEGDLTPVLRAYEKDLRSPFKGTVRGDLVRTLLIQVQKTKVDVEVAMSGIDALLKSQELVFGFVGLTPGILVSIGVMQYLRGAFGGRKGLNQSRRARRCVRVLRNIDRILSEALASPPQNNVLQYKDHGMLISEIHVLRRLARKIIPGDIEKEFLEDLDDLANLKGIGSQVRALERIRWAY | |||||||||||||||||||
1 | 6j72A2 | 0.07 | 0.05 | 0.67 | 0.62 | DisCoVER | -LLAVESELSSFNDPGERERLTAELERRKQEAQ--DA--LALWQQVLSDGIADLTVDDLRHRFRIIAAHTEKVIDCDPTLHWAEIGAELEDAVATAVGDNFVWAYQRAEALAAEVARTFTEVQMP-QIDPLRVRNEAKANVRKFVAFVVGKSRDRLKGIQRLRDHYREIANQTTRSLNESLQAAIAAALERQQNIL----------------------------------------------------------------------------------------- | |||||||||||||
2 | 6r9tA | 0.11 | 0.07 | 0.66 | 0.83 | DEthreader | AATQ-IAAQHASASAGPQPLLVQSCKAVAE-QI--LLVQGVRGSQPD-----------------------------------------------------------------AAAKASVPTIQ--DQ--AS-AMQLSQCAKNLGTALAELRTAAQKAQEACGLEM-SA--V--------------------PGETMEKCTQDLGNSTKAVSSAIAQLLGEVAQGNEYAGIAARDVAGGLRSLAQAARGVAAPQVLDTASDVLDKASSLLAAKAVTQALNRCVSCL | |||||||||||||
3 | 4iggA | 0.11 | 0.11 | 0.98 | 0.52 | CEthreader | RPSLEERLESIISGAALMADDRRERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLAKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDI-----TSIDDFLAVSENHILEDVNKCVIALQEKDVDGL--DRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAV | |||||||||||||
4 | 1ciiA | 0.06 | 0.06 | 0.99 | 0.68 | EigenThreader | QKDAQNADKKAADMLAEYERRKGILDTRLSELEKNGGAALAVLDAQQARLLGQQTRNDRAISEARNKLSSVTESLNTAQKNGKTIVSPEKFPNRANLNYLLSKIYNAEVAEWDKLRQRLLAESAVNSARNNLSARTNEQKHANDALNALLKEKENIRNQLSGINQKIAEEKRKQDELKATKDAINFTTEFLKSVSEKYGSSNLNRFSRGLGYADWITEFGKAVRTENWRPLFVKTEATALVALVFSILTGSALGIIGYGLLMAVTGALIDESLVEKANKFW---- | |||||||||||||
5 | 6gmhQ | 0.14 | 0.09 | 0.62 | 0.34 | HHpred | -------------------------------------------------------------------------------GGVEA------MQAESCYQLARSFHVQEDYDQAFQYYYQATQAS-SSFV---LPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGS---LYAAKGHLKKVTEQYP--DDV-------EAWIELAQILEQTD--IQVQADVPP----EILNNVGALHFRLGNL--GEAKKYFLASLDRAKAEYYNAISVTTSYNLARLY | |||||||||||||
6 | 4y21A | 0.11 | 0.10 | 0.92 | 0.55 | MRFsearch | --NLHFKVKWLYNEEPFVIQWLDENEEVSRDFLHGDVFSQLNQSFEIIKK-----DPQIVGHYMRRFAKTISNVLLQYADIVSKDFASNTQQLRVQLEKMFEAMGGKELDAEASGTLKELQVKLNNVL-DELSHVFATS---FQPHIEECVRQMGDILSQVVAQDADNVLQPIMDLLDSNLTLFAKIC--EKTVLKRVLKELWKLVMNTMERTIVKDHMVREEAKSLTPKQCAVVELALDTIKQYFHAG-GVGLKKTFLEK----------SPDLQSLRYALSLY | |||||||||||||
7 | 7jh5A | 0.16 | 0.14 | 0.84 | 1.00 | FFAS-3D | --SGSELARKLLEASTKLQRLNIRLAEALLEAIARLQELNLELVYLAVE--------LTDPKRIRDEIKEVKDKSKEIIRR-----------AEKEIDDAAKESE--------KILEEA-----REAISGELAKLLLAETQDLNLRAAKAF--LEAAAKLQELNIRAVELLPATIALEHAKRRSKEII--------DEAERAIRAAKRESERIIEEARRLIEKGSELAREHAQLQRLNLELLRELLRAL---AQLQELNLDLLRLADPDEARKAIARVKRESNAY | |||||||||||||
8 | 6w2rA | 0.12 | 0.09 | 0.76 | 0.82 | SPARKS-K | --------GTTEDERRELEKVARKAIEAAREGNTDEVREQLQRALEIARESG-------TKTAVKLALDVALRVAQEAAKRGN----------------------KDAIDEAAEVVVRIAEESNNS------------------DALEQALRVLEEIAKAVLKSEKTEDAKKAVKLVQEAYKAAQRAIEAAKRTGTPDVIKLAIKLAKLAARAALEVIKRPKSEEVNELKKIVKAIQEAVESLREAEESGDPEKREKARERVREAVERAEEV------------- | |||||||||||||
9 | 7jh5A | 0.13 | 0.11 | 0.86 | 0.92 | CNFpred | --SGSELARKLLEASTKLQRLNIRLAEALLEAIARLQELNLELVYLAVEL--------TDPKRIRDEIKEVKDKSKEIIRR-----------AEKEIDDAAKESE-----KILEEAREAISGSG-----SELAKLLLKAIAETQDLNLRAAKAFLEAAKLQELNIRAVELLV-REALEHAKRRSKEIIDEAE-RAIRAAKRESERIIEEARRLIEK---GSELARELLRAHAQLQRLNLELLRELLRALA---QLQELNLDLLRLASELTPDEARKAIARVKRES | |||||||||||||
10 | 4ut1A | 0.04 | 0.03 | 0.64 | 0.83 | DEthreader | -----QTVANNAADPSARQTA-MSNAQTLASQLVAAGQQYSQLRQSV-NSQLTDTVT-QINSYTSQIAQLNEQIASASS------------------------------------------------------P-NQLLDQRDLAVSKLSQLAGALGGLLAFRQTLDPAQAQLGALAVSFASQVNANGGSLAPVSAGYQLP-GT--TT-LA--YN-AASKT-------PYDPSKGASM--TI----------------V--SL-SGTP-AD---GDQF--TIGAN | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |