>PF08631 (257 residues) SAVAQGDFQKAVICVQRCKDMLMRLPKETCYLSLLCYNFGVETYEQKRYEQSSFWLSQSY EIGKMDKRYSTGQEMQAKVLRLLATVYLEWDCKVYQDKALQAISLANKENLHPAGFFLKI QILLKSGAADEDLSTAIAEIMHHEVSLDFCLNTAKMLLEHNRELVGFDFLKSVAGRFESS PDLGKVILLHIEFLLQRMREPLAKQKIEDIITGHYTGKQLSAETLNQLHIILWDRAAKNY EAKNYPEALQWYNYSLS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | SAVAQGDFQKAVICVQRCKDMLMRLPKETCYLSLLCYNFGVETYEQKRYEQSSFWLSQSYEIGKMDKRYSTGQEMQAKVLRLLATVYLEWDCKVYQDKALQAISLANKENLHPAGFFLKIQILLKSGAADEDLSTAIAEIMHHEVSLDFCLNTAKMLLEHNRELVGFDFLKSVAGRFESSPDLGKVILLHIEFLLQRMREPLAKQKIEDIITGHYTGKQLSAETLNQLHIILWDRAAKNYEAKNYPEALQWYNYSLS | |||||||||||||||||||
1 | 4a1sA | 0.07 | 0.07 | 0.95 | 1.17 | DEthreader | LYFLGDYN-KAMQYHKHDLTLAKSMNDRL-GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGD-RLSEGRALYNLGNVYHAKGHLDVKEALTRAVEFYQENLKMGAQGRACGNLGNTYYLLG-DFQAAIEHHQERLRADAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVGERVEAQSCYSLGNTYTLLHEFNTAIEYHN-RHLA-I-QELGDRIGEARACWSLGNAHSAI----G--GHERALKYAEQ | |||||||||||||
2 | 3sf4A | 0.08 | 0.08 | 0.95 | 1.33 | DEthreader | QLGAYDKALEYHHHDLTLARTI--G--DQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN-DK-V--GEARALYNLGNVYHAKGERDALQAAVDFYEENLSVDAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLAKAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARKDAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ-ELNDRI-GEGRACWSLGNAYTALG---NHDQAMHFAEKHLE | |||||||||||||
3 | 5o09C | 0.12 | 0.12 | 0.97 | 2.58 | HHpred | IFKQLRKFERAEGYYCEALETFQRLDGQSARVASVYNNLGVLYYSHMDVDRAQVMHERALAIRQNLHEGQMDPADLSQTFINLGAVYKAAGD---FQKAEACVDRAKRINGEIASQISVLADLRQKGDFRKSYREALF-RAQDPDLTGIYSLLAHLYDRWGRMDKAAEFYELLKISLEESDKVATIKNNLAMIFKQLRKFERAEGYYCEALETQRLDGEQS----ARVASVYNNLGVLYYSHMDVDRAQVMHERALA | |||||||||||||
4 | 4a1sA | 0.09 | 0.09 | 0.95 | 0.51 | DisCoVER | AYFYLGDYNKAMQYHKHDLTLAKSM-NDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL----GDRLSEGRALYNLGNVYHAKDVKEALTRAVEFYQENLKLMRAQGRACGNLGNTYYLLGFQ-AAIEHHQERLRIAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVLREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQE-----LGDRIGEARACWSLGNAHSAIGGHERALKYAEQHL- | |||||||||||||
5 | 3zgqA | 0.13 | 0.13 | 0.96 | 0.28 | MRFsearch | --HLKGQNKDALECLEQAEEIIQQEDKEEVRSLVTWGNYAWVYYHMDQLEEAQKYTGKIGNVCKKLSSPSNYKLECPETDCEKGWALLKFG-GKYYQKAKAAFEKALEVEPDNPEFNIGYAITVYRLDVKSFSLGPLRKAVTLNDNSYIKVFLALKLQDVHAEAEGEKYIEEILDQI---SSQPYVLRYAAKFYRRKNSWNKALELLKKALEVT----PTSSFLHHQMGLCYTDLANMYAEGGQYSNAEDIFRKALR | |||||||||||||
6 | 4i1aA | 0.09 | 0.08 | 0.94 | 1.32 | SPARKS-K | YEFRRKELISAISAYRIAESKLSEV-EDEIEKAEFFFKVSYVYYYMKQTYFSMNYANRALKIFREYE---EYAVQTVRCQFIVAGNLIDSLE---YERALEQFLKSLEISHLIAMSHMNIGICYDELKEYKKASQHLILALEISFLTKTLFTLTYVEAKQQNYNVALIYFRKGRFIASDDKEYSAKFKILEGLFFSDGETQLIKNAFSYLASRKM---------FADVENFSIEVADYFHEQGNLMLSNEYYRMSIE | |||||||||||||
7 | 4a1sA | 0.09 | 0.08 | 0.95 | 0.71 | MAPalign | AYFYLGDYNKAMQYHKHDLTLAKSM-NDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL----GDRLSEGRALYNLGNVYHAKGVKEALTRAVEFYQENLKLMA-QGRACGNLGNTYYLLGDFQAAIEHHQERLRIAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELEVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIA-----QELGDRIGEARACWSLGNAHSAIGGHERALKYAEQH-- | |||||||||||||
8 | 4a1sA | 0.09 | 0.09 | 0.96 | 0.51 | CEthreader | AYFYLGDYNKAMQYHKHDLTLAKSMND-RLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLG----DRLSEGRALYNLGNVYHAKGKKEALTRAVEFYQENLKLMGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELEVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGD-----RIGEARACWSLGNAHSAIGGHERALKYAEQHLQ | |||||||||||||
9 | 4i1aA | 0.09 | 0.09 | 0.94 | 1.12 | MUSTER | YEFRRKELISAISAYRIAESKLSEV-EDEIEKAEFFFKVSYVYYYMKQTYFSMNYANRALKIFRE---YEEYAVQTVRCQFIVAGNLIDSLE---YERALEQFLKSLEISHLIAMSHMNIGICYDELKEYKKASQHLILALEISFLTKTLFTLTYVEAKQQNYNVALIYFRKGRFIADDDKEYSAKFKILEGLFFSDGETQLIKNAFSYLASRKM---------FADVENFSIEVADYFHEQGNLMLSNEYYRMSIE | |||||||||||||
10 | 5o09C | 0.13 | 0.12 | 0.98 | 0.84 | HHsearch | IFKQLRKFERAEGYYCEALETFQRLDEQSARVASVYNNLGVLYYSHMDVDRAQVMHERALAIRQNLHEGQMDPADLSQTFINLGAVYKAAGD---FQKAEACVDRAKRIRAAAASQISVLADLRQKGDFRKA-ESLYREALFLQDPTGIYSLLAHLYDRWGRMDKAAEFYELLKISLEESDKVATIKNNLAMIFKQLRKFERAEGYYCEALETQRLDGEQSARVASVLSQTFINLGAVYKAAGDFQKAEACVDRAKR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |