Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | QHSHLHSNGSLTHPIIILFNAMATQKRVIFLGHGQPANDVATFVLSACALGSGCGAVFRGFTARAFPYANLTSLDEMEKVPGYIAGVTNPRFEDLPAWDVICNIETGRITISK |
1 | 4ksrA | 0.05 | 0.04 | 0.93 | 1.17 | DEthreader | | --DLHSLG-MTAHNHDNFRRLIKRHGIILVTGPTGS--GKSTTLYAGLQELN---SSERNILPVMVGEIRDLEAQIAVQAHLVMSTLHTNGAVTLISLLGVLAQRIHELLLVD |
2 | 4ksrA3 | 0.06 | 0.05 | 0.92 | 1.17 | DEthreader | | -HSGMT-----AHNHDNFRRLIKRPGIILVTGPTGS--GKSTTLYAGLQELNSS-RNIGIGQTVMVGEIRDLTAQIAVQAHLVMSTLHTNGAVTLISLLGVLAQRIHELLLVD |
3 | 6ekkA | 0.15 | 0.13 | 0.91 | 1.50 | HHpred | | LTEYFVAVDV--NNMLHLYASMLYERRILIICS--KLSTLTACIHGSAAMLYP----M--YWQHVYPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRLDDVILNVDTNTLETPF |
4 | 6ekkA2 | 0.14 | 0.12 | 0.91 | 1.96 | DisCoVER | | NLTEYFAV--DVNNMLHLYASMLYERRILIICSKLS--TLTACIHGSAAMLYP---MY--WQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVALDVVILNVDTNTLETP- |
5 | 6ekkA | 0.14 | 0.12 | 0.90 | 1.18 | MRFsearch | | --EYFVAV--DVNNMLHLYASMLYERRILIICS--KLSTLTACIHGSAAMLYPMYW-----QHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRDDVVILNVDTNTLETPF |
6 | 6ekkA2 | 0.13 | 0.12 | 0.92 | 1.92 | SPARKS-K | | LTEYFVAVDV--NNMLHLYASMLYERRILIICSK--LSTLTACIHGSAAMLYP-----MYWQHVYIPVLPPHLLDYCCAPMPYLIGIHLEKVRNMALDDVILNVDTNTLETPF |
7 | 6ekkA2 | 0.12 | 0.12 | 0.94 | 1.13 | MAPalign | | RNLTEYFVAVDVNNMLHLYASMLYERRILIICS--KLSTLTACIHGSAAML-----YPMYWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSKVRNMALDVVILNVDTNTLETPF |
8 | 6ekkA2 | 0.13 | 0.12 | 0.92 | 1.43 | CEthreader | | LTEYFVAVDV--NNMLHLYASMLYERRILIICSK--LSTLTACIHGSAAMLYPM-----YWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVLDDVVILNVDTNTLETPF |
9 | 6ekkA2 | 0.14 | 0.13 | 0.92 | 1.64 | MUSTER | | LTEYFVAVDV--NNMLHLYASMLYERRILIICSK--LSTLTACIHGSAAMLYPMY-----WQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKMALDDVILNVDTNTLETPF |
10 | 6ekkA | 0.15 | 0.13 | 0.91 | 3.66 | HHsearch | | LTEYFVAVDV--NNMLHLYASMLYERRILIICS--KLSTLTACIHGSAAMLYP----MY--WQHVYPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRLDDVILNVDTNTLETPF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|